EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020012870 (Gene tree)
Gene ID: -
Gene Symbol: R3HCC1
Alias: DKFZp564N123
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 46034 bases
Position: chrQKWQ01001821.1:34381307-34427340
Accession: 27329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020016039	R3H	PF01424.22	4.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020018622	R3HCC1-201	1283	-	ENSCAFP00020016039	426 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020012870's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020012870's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020012870	R3HCC1	93	70.833	ENSG00000104679	R3HCC1	100	100.000	Homo_sapiens
ENSCAFG00020012870	R3HCC1	65	40.141	ENSAPOG00000003616	r3hcc1	52	43.617	Acanthochromis_polyacanthus
ENSCAFG00020012870	R3HCC1	90	85.233	ENSAMEG00000002963	R3HCC1	81	85.233	Ailuropoda_melanoleuca
ENSCAFG00020012870	R3HCC1	82	32.964	ENSAOCG00000003945	r3hcc1	83	32.964	Amphiprion_ocellaris
ENSCAFG00020012870	R3HCC1	82	32.143	ENSAPEG00000003613	r3hcc1	83	32.143	Amphiprion_percula
ENSCAFG00020012870	R3HCC1	87	42.211	ENSACAG00000016627	R3HCC1	84	42.105	Anolis_carolinensis
ENSCAFG00020012870	R3HCC1	88	72.296	ENSANAG00000036169	R3HCC1	83	73.980	Aotus_nancymaae
ENSCAFG00020012870	R3HCC1	88	72.324	ENSBTAG00000025830	R3HCC1	83	72.585	Bos_taurus
ENSCAFG00020012870	R3HCC1	90	71.899	ENSCJAG00000020118	R3HCC1	76	74.684	Callithrix_jacchus
ENSCAFG00020012870	R3HCC1	87	98.656	ENSCAFG00000009210	R3HCC1	81	98.656	Canis_familiaris
ENSCAFG00020012870	R3HCC1	86	67.188	ENSCHIG00000009107	R3HCC1	83	67.448	Capra_hircus
ENSCAFG00020012870	R3HCC1	92	73.671	ENSTSYG00000000511	R3HCC1	70	73.671	Carlito_syrichta
ENSCAFG00020012870	R3HCC1	70	55.752	ENSCAPG00000015813	R3HCC1	81	54.867	Cavia_aperea
ENSCAFG00020012870	R3HCC1	86	61.728	ENSCPOG00000009696	R3HCC1	86	60.988	Cavia_porcellus
ENSCAFG00020012870	R3HCC1	91	71.178	ENSCCAG00000037811	R3HCC1	83	73.935	Cebus_capucinus
ENSCAFG00020012870	R3HCC1	92	73.537	ENSCATG00000032971	R3HCC1	90	63.591	Cercocebus_atys
ENSCAFG00020012870	R3HCC1	87	69.811	ENSCLAG00000015556	R3HCC1	75	68.193	Chinchilla_lanigera
ENSCAFG00020012870	R3HCC1	91	74.742	ENSCSAG00000016250	R3HCC1	81	75.000	Chlorocebus_sabaeus
ENSCAFG00020012870	R3HCC1	86	71.046	ENSCHOG00000000396	R3HCC1	84	70.513	Choloepus_hoffmanni
ENSCAFG00020012870	R3HCC1	91	72.682	ENSCANG00000029441	R3HCC1	83	72.932	Colobus_angolensis_palliatus
ENSCAFG00020012870	R3HCC1	86	55.690	ENSCGRG00001014977	R3hcc1	85	58.354	Cricetulus_griseus_chok1gshd
ENSCAFG00020012870	R3HCC1	86	55.690	ENSCGRG00000004454	R3hcc1	85	58.354	Cricetulus_griseus_crigri
ENSCAFG00020012870	R3HCC1	87	31.043	ENSCSEG00000005748	r3hcc1	63	42.308	Cynoglossus_semilaevis
ENSCAFG00020012870	R3HCC1	85	32.642	ENSCVAG00000002640	r3hcc1	96	31.250	Cyprinodon_variegatus
ENSCAFG00020012870	R3HCC1	89	32.808	ENSDARG00000099593	r3hcc1	84	32.181	Danio_rerio
ENSCAFG00020012870	R3HCC1	88	75.132	ENSDNOG00000007168	R3HCC1	81	74.235	Dasypus_novemcinctus
ENSCAFG00020012870	R3HCC1	90	54.018	ENSDORG00000026365	R3hcc1	92	56.250	Dipodomys_ordii
ENSCAFG00020012870	R3HCC1	81	67.241	ENSETEG00000001147	R3HCC1	76	67.529	Echinops_telfairi
ENSCAFG00020012870	R3HCC1	90	75.835	ENSEASG00005018782	R3HCC1	76	71.838	Equus_asinus_asinus
ENSCAFG00020012870	R3HCC1	90	74.550	ENSECAG00000025013	R3HCC1	86	75.064	Equus_caballus
ENSCAFG00020012870	R3HCC1	90	69.509	ENSEEUG00000011918	R3HCC1	84	69.509	Erinaceus_europaeus
ENSCAFG00020012870	R3HCC1	80	31.880	ENSELUG00000023650	r3hcc1	88	31.088	Esox_lucius
ENSCAFG00020012870	R3HCC1	90	85.901	ENSFCAG00000012395	R3HCC1	83	86.133	Felis_catus
ENSCAFG00020012870	R3HCC1	86	61.578	ENSFDAG00000001572	R3HCC1	84	60.606	Fukomys_damarensis
ENSCAFG00020012870	R3HCC1	67	37.143	ENSGMOG00000017590	-	69	46.269	Gadus_morhua
ENSCAFG00020012870	R3HCC1	85	34.400	ENSGAFG00000008747	-	77	34.109	Gambusia_affinis
ENSCAFG00020012870	R3HCC1	87	32.011	ENSGACG00000008447	r3hcc1	83	32.632	Gasterosteus_aculeatus
ENSCAFG00020012870	R3HCC1	91	72.796	ENSGGOG00000013817	R3HCC1	83	75.683	Gorilla_gorilla
ENSCAFG00020012870	R3HCC1	87	67.742	ENSHGLG00000010517	R3HCC1	83	65.099	Heterocephalus_glaber_female
ENSCAFG00020012870	R3HCC1	87	67.742	ENSHGLG00100006388	R3HCC1	83	65.099	Heterocephalus_glaber_male
ENSCAFG00020012870	R3HCC1	55	41.111	ENSHCOG00000011745	r3hcc1	56	41.497	Hippocampus_comes
ENSCAFG00020012870	R3HCC1	86	33.875	ENSIPUG00000024504	r3hcc1	74	33.777	Ictalurus_punctatus
ENSCAFG00020012870	R3HCC1	86	62.466	ENSSTOG00000027130	R3HCC1	84	61.480	Ictidomys_tridecemlineatus
ENSCAFG00020012870	R3HCC1	86	58.779	ENSJJAG00000013075	R3hcc1	85	61.832	Jaculus_jaculus
ENSCAFG00020012870	R3HCC1	85	39.487	ENSLACG00000011894	R3HCC1	84	38.776	Latimeria_chalumnae
ENSCAFG00020012870	R3HCC1	87	32.391	ENSLOCG00000015442	r3hcc1	82	32.990	Lepisosteus_oculatus
ENSCAFG00020012870	R3HCC1	91	62.558	ENSLAFG00000016137	R3HCC1	85	64.884	Loxodonta_africana
ENSCAFG00020012870	R3HCC1	92	73.537	ENSMFAG00000032894	R3HCC1	83	71.814	Macaca_fascicularis
ENSCAFG00020012870	R3HCC1	92	73.282	ENSMMUG00000016655	R3HCC1	80	74.227	Macaca_mulatta
ENSCAFG00020012870	R3HCC1	96	69.321	ENSMNEG00000043283	R3HCC1	90	63.342	Macaca_nemestrina
ENSCAFG00020012870	R3HCC1	91	72.613	ENSMLEG00000030147	R3HCC1	83	72.864	Mandrillus_leucophaeus
ENSCAFG00020012870	R3HCC1	87	43.864	ENSMGAG00000001356	R3HCC1	77	43.864	Meleagris_gallopavo
ENSCAFG00020012870	R3HCC1	93	68.922	ENSMICG00000011146	R3HCC1	86	69.173	Microcebus_murinus
ENSCAFG00020012870	R3HCC1	86	57.279	ENSMOCG00000018508	R3hcc1	85	56.086	Microtus_ochrogaster
ENSCAFG00020012870	R3HCC1	86	44.186	ENSMODG00000016809	-	85	43.846	Monodelphis_domestica
ENSCAFG00020012870	R3HCC1	86	54.762	MGP_CAROLIEiJ_G0019467	R3hcc1	85	53.333	Mus_caroli
ENSCAFG00020012870	R3HCC1	86	54.524	ENSMUSG00000034194	R3hcc1	85	54.762	Mus_musculus
ENSCAFG00020012870	R3HCC1	86	54.801	MGP_PahariEiJ_G0030484	R3hcc1	68	71.739	Mus_pahari
ENSCAFG00020012870	R3HCC1	86	54.502	MGP_SPRETEiJ_G0020359	R3hcc1	85	54.739	Mus_spretus
ENSCAFG00020012870	R3HCC1	90	84.456	ENSMPUG00000003457	R3HCC1	77	84.456	Mustela_putorius_furo
ENSCAFG00020012870	R3HCC1	87	74.263	ENSMLUG00000000266	R3HCC1	79	76.720	Myotis_lucifugus
ENSCAFG00020012870	R3HCC1	86	65.116	ENSNGAG00000016747	R3hcc1	84	65.375	Nannospalax_galili
ENSCAFG00020012870	R3HCC1	90	72.152	ENSNLEG00000015944	R3HCC1	85	72.405	Nomascus_leucogenys
ENSCAFG00020012870	R3HCC1	85	52.973	ENSMEUG00000010587	R3HCC1	82	52.973	Notamacropus_eugenii
ENSCAFG00020012870	R3HCC1	89	63.185	ENSOPRG00000013390	R3HCC1	82	63.185	Ochotona_princeps
ENSCAFG00020012870	R3HCC1	86	61.845	ENSODEG00000007529	R3HCC1	85	62.095	Octodon_degus
ENSCAFG00020012870	R3HCC1	89	53.985	ENSOANG00000013877	R3HCC1	85	53.728	Ornithorhynchus_anatinus
ENSCAFG00020012870	R3HCC1	87	64.247	ENSOCUG00000023554	R3HCC1	74	63.496	Oryctolagus_cuniculus
ENSCAFG00020012870	R3HCC1	78	31.085	ENSORLG00000016816	r3hcc1	80	30.725	Oryzias_latipes
ENSCAFG00020012870	R3HCC1	78	31.014	ENSORLG00020012005	r3hcc1	80	31.180	Oryzias_latipes_hni
ENSCAFG00020012870	R3HCC1	78	31.195	ENSORLG00015007018	r3hcc1	80	32.000	Oryzias_latipes_hsok
ENSCAFG00020012870	R3HCC1	78	33.819	ENSOMEG00000000816	r3hcc1	80	31.884	Oryzias_melastigma
ENSCAFG00020012870	R3HCC1	91	68.638	ENSOGAG00000001291	R3HCC1	82	66.495	Otolemur_garnettii
ENSCAFG00020012870	R3HCC1	87	73.138	ENSOARG00000010146	R3HCC1	83	73.404	Ovis_aries
ENSCAFG00020012870	R3HCC1	91	72.431	ENSPPAG00000033165	R3HCC1	84	75.272	Pan_paniscus
ENSCAFG00020012870	R3HCC1	86	86.066	ENSPPRG00000002522	R3HCC1	84	86.885	Panthera_pardus
ENSCAFG00020012870	R3HCC1	82	78.904	ENSPTIG00000011230	R3HCC1	87	79.235	Panthera_tigris_altaica
ENSCAFG00020012870	R3HCC1	91	72.682	ENSPTRG00000020076	R3HCC1	83	72.932	Pan_troglodytes
ENSCAFG00020012870	R3HCC1	91	72.864	ENSPANG00000000453	R3HCC1	83	73.116	Papio_anubis
ENSCAFG00020012870	R3HCC1	78	34.412	ENSPKIG00000014426	-	77	34.018	Paramormyrops_kingsleyae
ENSCAFG00020012870	R3HCC1	78	33.631	ENSPKIG00000020397	-	79	32.845	Paramormyrops_kingsleyae
ENSCAFG00020012870	R3HCC1	87	44.588	ENSPSIG00000017664	R3HCC1	84	43.467	Pelodiscus_sinensis
ENSCAFG00020012870	R3HCC1	86	58.010	ENSPEMG00000007118	R3hcc1	85	57.805	Peromyscus_maniculatus_bairdii
ENSCAFG00020012870	R3HCC1	77	46.218	ENSPCIG00000022718	-	70	47.661	Phascolarctos_cinereus
ENSCAFG00020012870	R3HCC1	85	33.245	ENSPFOG00000022301	r3hcc1	78	32.982	Poecilia_formosa
ENSCAFG00020012870	R3HCC1	85	33.333	ENSPLAG00000010794	r3hcc1	78	33.245	Poecilia_latipinna
ENSCAFG00020012870	R3HCC1	85	33.245	ENSPMEG00000022515	r3hcc1	78	32.982	Poecilia_mexicana
ENSCAFG00020012870	R3HCC1	85	34.133	ENSPREG00000000713	r3hcc1	77	31.830	Poecilia_reticulata
ENSCAFG00020012870	R3HCC1	78	73.952	ENSPPYG00000018436	R3HCC1	82	73.952	Pongo_abelii
ENSCAFG00020012870	R3HCC1	63	80.645	ENSPCAG00000012229	R3HCC1	59	80.645	Procavia_capensis
ENSCAFG00020012870	R3HCC1	86	71.585	ENSPCOG00000027554	R3HCC1	84	72.131	Propithecus_coquereli
ENSCAFG00020012870	R3HCC1	90	72.751	ENSPVAG00000009829	R3HCC1	84	71.979	Pteropus_vampyrus
ENSCAFG00020012870	R3HCC1	84	33.241	ENSPNAG00000023875	r3hcc1	59	46.429	Pygocentrus_nattereri
ENSCAFG00020012870	R3HCC1	87	55.319	ENSRNOG00000016777	AABR07018321.1	73	55.581	Rattus_norvegicus
ENSCAFG00020012870	R3HCC1	86	75.000	ENSRBIG00000028045	R3HCC1	84	75.272	Rhinopithecus_bieti
ENSCAFG00020012870	R3HCC1	91	72.750	ENSRROG00000031126	R3HCC1	80	73.000	Rhinopithecus_roxellana
ENSCAFG00020012870	R3HCC1	86	75.272	ENSSBOG00000022590	R3HCC1	84	75.543	Saimiri_boliviensis_boliviensis
ENSCAFG00020012870	R3HCC1	85	48.148	ENSSHAG00000016526	-	82	47.619	Sarcophilus_harrisii
ENSCAFG00020012870	R3HCC1	80	34.593	ENSSFOG00015013507	r3hcc1	87	46.067	Scleropages_formosus
ENSCAFG00020012870	R3HCC1	56	79.021	ENSSARG00000013514	-	55	79.021	Sorex_araneus
ENSCAFG00020012870	R3HCC1	81	31.452	ENSSPAG00000013497	r3hcc1	81	30.052	Stegastes_partitus
ENSCAFG00020012870	R3HCC1	92	73.990	ENSSSCG00000039915	-	84	74.242	Sus_scrofa
ENSCAFG00020012870	R3HCC1	87	72.800	ENSSSCG00000037347	-	77	73.067	Sus_scrofa
ENSCAFG00020012870	R3HCC1	82	31.054	ENSTRUG00000015880	r3hcc1	81	31.638	Takifugu_rubripes
ENSCAFG00020012870	R3HCC1	90	69.531	ENSTTRG00000012247	R3HCC1	84	72.135	Tursiops_truncatus
ENSCAFG00020012870	R3HCC1	86	86.339	ENSUAMG00000007344	R3HCC1	83	86.339	Ursus_americanus
ENSCAFG00020012870	R3HCC1	89	95.238	ENSVVUG00000005056	R3HCC1	81	96.505	Vulpes_vulpes
ENSCAFG00020012870	R3HCC1	81	31.129	ENSXCOG00000017626	r3hcc1	75	32.213	Xiphophorus_couchianus
ENSCAFG00020012870	R3HCC1	54	45.238	ENSXMAG00000018375	r3hcc1	77	32.361	Xiphophorus_maculatus