EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020013154 (Gene tree)
Gene ID: 112646186
Gene Symbol: -
Alias: -
Full Name: RNA polymerase II subunit J
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 3169 bases
Position: chrQKWQ01002087.1:7594323-7597491
Accession: 112646186
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020016393	RNA_pol_L_2	PF13656.6	3.6e-29	1	1
ENSCAFP00020016397	RNA_pol_L_2	PF13656.6	5.1e-29	1	1
ENSCAFP00020016398	RNA_pol_L_2	PF13656.6	4.2e-18	1	1
ENSCAFP00020016393	RNA_pol_L	PF01193.24	3.9e-10	1	1
ENSCAFP00020016397	RNA_pol_L	PF01193.24	5.5e-10	1	1
ENSCAFP00020016398	RNA_pol_L	PF01193.24	0.00036	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020019017	-	354	-	ENSCAFP00020016393	117 (aa)	XP_025281693	UPI000000B2C2
ENSCAFT00020019022	-	315	-	ENSCAFP00020016398	104 (aa)	-	-
ENSCAFT00020019021	-	405	-	ENSCAFP00020016397	134 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020013154's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020013154's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020013154	-	100	92.126	ENSANAG00000020385	-	100	92.126	Aotus_nancymaae
ENSCAFG00020013154	-	100	100.000	ENSBTAG00000005446	POLR2J	100	100.000	Bos_taurus
ENSCAFG00020013154	-	100	100.000	ENSCHIG00000009008	-	100	100.000	Capra_hircus
ENSCAFG00020013154	-	96	91.964	ENSCAPG00000013625	-	96	91.964	Cavia_aperea
ENSCAFG00020013154	-	100	100.000	ENSCCAG00000029378	-	100	100.000	Cebus_capucinus
ENSCAFG00020013154	-	77	81.250	ENSCHOG00000008325	-	54	100.000	Choloepus_hoffmanni
ENSCAFG00020013154	-	85	99.000	ENSCPBG00000027774	-	84	99.000	Chrysemys_picta_bellii
ENSCAFG00020013154	-	100	100.000	ENSECAG00000022750	-	100	100.000	Equus_caballus
ENSCAFG00020013154	-	98	66.990	ENSGGOG00000043186	-	83	79.747	Gorilla_gorilla
ENSCAFG00020013154	-	82	72.941	ENSGGOG00000003934	-	85	84.722	Gorilla_gorilla
ENSCAFG00020013154	-	77	97.778	ENSGGOG00000038950	-	52	97.778	Gorilla_gorilla
ENSCAFG00020013154	-	59	93.443	ENSLACG00000022567	-	60	92.063	Latimeria_chalumnae
ENSCAFG00020013154	-	91	99.065	ENSMFAG00000039168	-	100	92.241	Macaca_fascicularis
ENSCAFG00020013154	-	100	100.000	ENSMLEG00000033262	-	100	100.000	Mandrillus_leucophaeus
ENSCAFG00020013154	-	100	100.000	ENSMICG00000010323	-	100	100.000	Microcebus_murinus
ENSCAFG00020013154	-	91	74.766	ENSPTRG00000050290	-	90	86.076	Pan_troglodytes
ENSCAFG00020013154	-	100	100.000	ENSPTRG00000019132	-	100	100.000	Pan_troglodytes
ENSCAFG00020013154	-	77	72.222	ENSPTRG00000052689	-	57	71.739	Pan_troglodytes
ENSCAFG00020013154	-	62	92.188	ENSPTRG00000028611	-	54	95.082	Pan_troglodytes
ENSCAFG00020013154	-	100	80.342	ENSPANG00000015179	-	89	100.000	Papio_anubis
ENSCAFG00020013154	-	100	96.581	ENSPKIG00000013014	-	100	96.581	Paramormyrops_kingsleyae
ENSCAFG00020013154	-	92	99.074	ENSPCAG00000003269	-	71	90.244	Procavia_capensis
ENSCAFG00020013154	-	100	100.000	ENSRBIG00000042413	-	100	100.000	Rhinopithecus_bieti
ENSCAFG00020013154	-	98	93.043	ENSRROG00000035578	-	99	96.396	Rhinopithecus_roxellana
ENSCAFG00020013154	-	76	100.000	ENSTTRG00000014846	-	81	85.470	Tursiops_truncatus
ENSCAFG00020013154	-	91	73.832	ENSVPAG00000007077	-	74	64.662	Vicugna_pacos
ENSCAFG00020013154	-	100	100.000	ENSVVUG00000023727	-	100	100.000	Vulpes_vulpes