EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020013161 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein F-like
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 3941 bases
Position: chrQKWQ01000972.1:2172961-2176901
Accession: 112655617
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020016400	LSM	PF01423.22	9.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020019024	-	285	XM_025440818	ENSCAFP00020016400	94 (aa)	XP_025296603	-

Gene Model

Click here to download ENSCAFG00020013161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020013161's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020013161	-	72	92.647	ENSCAFG00020010823	-	91	84.615
ENSCAFG00020013161	-	80	46.667	ENSCAFG00020025902	LSM6	94	46.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020013161	-	74	97.143	ENSG00000139343	SNRPF	91	88.462	Homo_sapiens
ENSCAFG00020013161	-	74	94.286	ENSAPOG00000003377	snrpf	61	85.897	Acanthochromis_polyacanthus
ENSCAFG00020013161	-	74	97.143	ENSAMEG00000002166	-	92	88.462	Ailuropoda_melanoleuca
ENSCAFG00020013161	-	76	88.732	ENSAMEG00000018718	-	91	82.051	Ailuropoda_melanoleuca
ENSCAFG00020013161	-	74	94.286	ENSACIG00000013216	snrpf	92	85.897	Amphilophus_citrinellus
ENSCAFG00020013161	-	74	94.286	ENSAOCG00000015108	snrpf	92	85.897	Amphiprion_ocellaris
ENSCAFG00020013161	-	74	94.286	ENSAPEG00000022022	snrpf	92	85.897	Amphiprion_percula
ENSCAFG00020013161	-	74	94.286	ENSATEG00000022625	snrpf	84	85.897	Anabas_testudineus
ENSCAFG00020013161	-	74	95.714	ENSACAG00000014073	SNRPF	90	87.179	Anolis_carolinensis
ENSCAFG00020013161	-	74	97.143	ENSANAG00000032845	SNRPF	91	88.462	Aotus_nancymaae
ENSCAFG00020013161	-	74	90.000	ENSANAG00000020297	-	72	82.051	Aotus_nancymaae
ENSCAFG00020013161	-	74	68.571	ENSANAG00000025860	-	85	64.000	Aotus_nancymaae
ENSCAFG00020013161	-	74	94.286	ENSACLG00000016066	snrpf	92	85.897	Astatotilapia_calliptera
ENSCAFG00020013161	-	74	91.429	ENSAMXG00000007421	snrpf	91	83.333	Astyanax_mexicanus
ENSCAFG00020013161	-	74	97.143	ENSBTAG00000016271	SNRPF	91	88.462	Bos_taurus
ENSCAFG00020013161	-	83	84.615	ENSBTAG00000050012	-	94	84.615	Bos_taurus
ENSCAFG00020013161	-	74	74.286	WBGene00004918	snr-5	82	74.286	Caenorhabditis_elegans
ENSCAFG00020013161	-	74	97.143	ENSCJAG00000002705	-	91	88.462	Callithrix_jacchus
ENSCAFG00020013161	-	87	85.366	ENSCAFG00000006395	-	70	88.462	Canis_familiaris
ENSCAFG00020013161	-	72	92.647	ENSCAFG00000031151	-	91	84.615	Canis_familiaris
ENSCAFG00020013161	-	74	84.286	ENSTSYG00000030635	-	90	76.923	Carlito_syrichta
ENSCAFG00020013161	-	83	85.897	ENSTSYG00000031636	-	66	85.897	Carlito_syrichta
ENSCAFG00020013161	-	74	90.141	ENSTSYG00000036502	-	91	82.278	Carlito_syrichta
ENSCAFG00020013161	-	74	97.143	ENSCAPG00000007242	SNRPF	92	88.462	Cavia_aperea
ENSCAFG00020013161	-	74	97.143	ENSCPOG00000013898	SNRPF	91	88.462	Cavia_porcellus
ENSCAFG00020013161	-	79	86.486	ENSCCAG00000033627	-	58	86.486	Cebus_capucinus
ENSCAFG00020013161	-	72	97.059	ENSCCAG00000017356	-	91	88.462	Cebus_capucinus
ENSCAFG00020013161	-	74	97.143	ENSCCAG00000037378	-	91	88.462	Cebus_capucinus
ENSCAFG00020013161	-	74	97.143	ENSCLAG00000007200	SNRPF	91	88.462	Chinchilla_lanigera
ENSCAFG00020013161	-	74	97.143	ENSCSAG00000003602	-	63	88.462	Chlorocebus_sabaeus
ENSCAFG00020013161	-	63	98.305	ENSCHOG00000009392	SNRPF	92	98.305	Choloepus_hoffmanni
ENSCAFG00020013161	-	74	88.571	ENSCPBG00000006227	-	91	80.769	Chrysemys_picta_bellii
ENSCAFG00020013161	-	77	90.278	ENSCPBG00000024287	-	58	90.278	Chrysemys_picta_bellii
ENSCAFG00020013161	-	83	82.051	ENSCPBG00000026463	-	91	82.051	Chrysemys_picta_bellii
ENSCAFG00020013161	-	78	83.562	ENSCPBG00000001985	-	87	83.562	Chrysemys_picta_bellii
ENSCAFG00020013161	-	83	82.051	ENSCSAVG00000007498	-	89	82.051	Ciona_savignyi
ENSCAFG00020013161	-	74	90.000	ENSCGRG00001008965	-	61	82.051	Cricetulus_griseus_chok1gshd
ENSCAFG00020013161	-	74	97.143	ENSCGRG00001017100	-	91	88.462	Cricetulus_griseus_chok1gshd
ENSCAFG00020013161	-	80	84.000	ENSCGRG00000018878	-	94	84.000	Cricetulus_griseus_crigri
ENSCAFG00020013161	-	74	97.143	ENSCGRG00000000336	-	91	88.462	Cricetulus_griseus_crigri
ENSCAFG00020013161	-	74	92.857	ENSCSEG00000004748	snrpf	91	84.615	Cynoglossus_semilaevis
ENSCAFG00020013161	-	74	94.286	ENSCVAG00000000397	snrpf	62	85.897	Cyprinodon_variegatus
ENSCAFG00020013161	-	74	91.667	ENSDARG00000105037	snrpf	91	83.750	Danio_rerio
ENSCAFG00020013161	-	74	81.429	ENSDNOG00000049373	-	65	76.000	Dasypus_novemcinctus
ENSCAFG00020013161	-	74	98.571	ENSDNOG00000048989	-	70	89.744	Dasypus_novemcinctus
ENSCAFG00020013161	-	74	97.143	ENSDNOG00000043775	-	50	88.462	Dasypus_novemcinctus
ENSCAFG00020013161	-	63	94.915	ENSDORG00000029740	-	82	85.075	Dipodomys_ordii
ENSCAFG00020013161	-	71	85.075	ENSDORG00000025351	-	93	85.075	Dipodomys_ordii
ENSCAFG00020013161	-	90	70.588	FBgn0000426	SmF	97	70.588	Drosophila_melanogaster
ENSCAFG00020013161	-	74	97.143	ENSETEG00000001558	-	91	88.462	Echinops_telfairi
ENSCAFG00020013161	-	70	86.364	ENSEBUG00000001793	-	71	86.364	Eptatretus_burgeri
ENSCAFG00020013161	-	74	97.143	ENSECAG00000019817	SNRPF	63	88.462	Equus_caballus
ENSCAFG00020013161	-	74	97.143	ENSEEUG00000013509	SNRPF	92	88.462	Erinaceus_europaeus
ENSCAFG00020013161	-	74	91.429	ENSELUG00000003121	RUXF	91	83.333	Esox_lucius
ENSCAFG00020013161	-	74	90.000	ENSELUG00000007737	RUXF	90	82.051	Esox_lucius
ENSCAFG00020013161	-	74	71.429	ENSFCAG00000031148	-	72	65.385	Felis_catus
ENSCAFG00020013161	-	74	97.143	ENSFCAG00000029966	-	91	88.462	Felis_catus
ENSCAFG00020013161	-	74	72.857	ENSFCAG00000021942	-	90	66.667	Felis_catus
ENSCAFG00020013161	-	74	97.143	ENSFALG00000010799	SNRPF	91	88.462	Ficedula_albicollis
ENSCAFG00020013161	-	74	97.143	ENSFDAG00000002831	-	91	88.462	Fukomys_damarensis
ENSCAFG00020013161	-	74	94.286	ENSFHEG00000003240	snrpf	68	85.897	Fundulus_heteroclitus
ENSCAFG00020013161	-	74	94.286	ENSGMOG00000007741	snrpf	92	85.897	Gadus_morhua
ENSCAFG00020013161	-	74	97.143	ENSGALG00000011409	SNRPF	91	88.462	Gallus_gallus
ENSCAFG00020013161	-	74	94.286	ENSGAFG00000016187	snrpf	90	85.897	Gambusia_affinis
ENSCAFG00020013161	-	74	92.857	ENSGACG00000020055	snrpf	92	84.615	Gasterosteus_aculeatus
ENSCAFG00020013161	-	68	84.375	ENSGAGG00000014132	-	94	74.359	Gopherus_agassizii
ENSCAFG00020013161	-	59	85.455	ENSGAGG00000011163	-	96	85.455	Gopherus_agassizii
ENSCAFG00020013161	-	70	89.394	ENSGAGG00000012945	-	67	89.041	Gopherus_agassizii
ENSCAFG00020013161	-	79	85.135	ENSGAGG00000022991	-	87	85.135	Gopherus_agassizii
ENSCAFG00020013161	-	83	66.667	ENSGGOG00000039564	-	93	66.667	Gorilla_gorilla
ENSCAFG00020013161	-	74	75.714	ENSGGOG00000039936	-	87	69.231	Gorilla_gorilla
ENSCAFG00020013161	-	74	97.143	ENSGGOG00000001127	-	92	88.462	Gorilla_gorilla
ENSCAFG00020013161	-	74	95.714	ENSHGLG00000021172	-	91	87.179	Heterocephalus_glaber_female
ENSCAFG00020013161	-	74	97.143	ENSHGLG00000009108	SNRPF	91	88.462	Heterocephalus_glaber_female
ENSCAFG00020013161	-	74	97.143	ENSHGLG00100008103	-	92	88.462	Heterocephalus_glaber_male
ENSCAFG00020013161	-	74	95.714	ENSHGLG00100019596	-	91	87.179	Heterocephalus_glaber_male
ENSCAFG00020013161	-	64	83.582	ENSHCOG00000018663	snrpf	52	83.582	Hippocampus_comes
ENSCAFG00020013161	-	74	94.286	ENSIPUG00000018994	snrpf	92	85.897	Ictalurus_punctatus
ENSCAFG00020013161	-	74	97.143	ENSSTOG00000010434	-	91	88.462	Ictidomys_tridecemlineatus
ENSCAFG00020013161	-	62	89.655	ENSJJAG00000004828	-	89	89.655	Jaculus_jaculus
ENSCAFG00020013161	-	74	97.143	ENSJJAG00000011272	-	91	88.462	Jaculus_jaculus
ENSCAFG00020013161	-	78	76.712	ENSJJAG00000004558	-	87	76.712	Jaculus_jaculus
ENSCAFG00020013161	-	77	84.722	ENSJJAG00000010502	-	86	84.722	Jaculus_jaculus
ENSCAFG00020013161	-	74	94.286	ENSKMAG00000013566	snrpf	91	85.897	Kryptolebias_marmoratus
ENSCAFG00020013161	-	74	92.857	ENSLBEG00000008800	snrpf	91	84.615	Labrus_bergylta
ENSCAFG00020013161	-	74	97.143	ENSLACG00000002456	-	67	88.462	Latimeria_chalumnae
ENSCAFG00020013161	-	74	91.429	ENSLOCG00000015744	snrpf	91	83.333	Lepisosteus_oculatus
ENSCAFG00020013161	-	74	97.143	ENSLAFG00000017426	SNRPF	91	88.462	Loxodonta_africana
ENSCAFG00020013161	-	74	92.857	ENSMAMG00000016593	snrpf	92	84.615	Mastacembelus_armatus
ENSCAFG00020013161	-	74	94.286	ENSMZEG00005014701	snrpf	92	85.897	Maylandia_zebra
ENSCAFG00020013161	-	74	97.143	ENSMGAG00000011453	-	70	88.462	Meleagris_gallopavo
ENSCAFG00020013161	-	67	96.825	ENSMAUG00000016909	-	96	87.324	Mesocricetus_auratus
ENSCAFG00020013161	-	74	91.429	ENSMAUG00000008799	-	91	83.333	Mesocricetus_auratus
ENSCAFG00020013161	-	67	96.825	ENSMAUG00000019737	-	96	87.324	Mesocricetus_auratus
ENSCAFG00020013161	-	60	87.500	ENSMAUG00000010289	-	74	87.500	Mesocricetus_auratus
ENSCAFG00020013161	-	74	97.143	ENSMICG00000012153	-	91	88.462	Microcebus_murinus
ENSCAFG00020013161	-	74	90.000	ENSMICG00000030494	-	62	82.051	Microcebus_murinus
ENSCAFG00020013161	-	72	80.882	ENSMOCG00000020220	-	92	76.389	Microtus_ochrogaster
ENSCAFG00020013161	-	74	97.143	ENSMOCG00000020437	Snrpf	91	88.462	Microtus_ochrogaster
ENSCAFG00020013161	-	74	85.714	ENSMOCG00000022166	-	81	81.081	Microtus_ochrogaster
ENSCAFG00020013161	-	74	92.857	ENSMMOG00000007127	snrpf	92	84.615	Mola_mola
ENSCAFG00020013161	-	74	97.143	ENSMODG00000008091	SNRPF	68	88.462	Monodelphis_domestica
ENSCAFG00020013161	-	74	94.286	ENSMALG00000012328	snrpf	92	85.897	Monopterus_albus
ENSCAFG00020013161	-	74	97.143	MGP_CAROLIEiJ_G0015735	-	91	88.462	Mus_caroli
ENSCAFG00020013161	-	74	97.143	ENSMUSG00000020018	Snrpf	91	88.462	Mus_musculus
ENSCAFG00020013161	-	74	97.143	MGP_PahariEiJ_G0031350	Snrpf	91	88.462	Mus_pahari
ENSCAFG00020013161	-	74	97.143	MGP_SPRETEiJ_G0016553	Snrpf	91	88.462	Mus_spretus
ENSCAFG00020013161	-	74	97.143	ENSMPUG00000007176	-	70	88.462	Mustela_putorius_furo
ENSCAFG00020013161	-	74	97.143	ENSMLUG00000027932	-	74	88.462	Myotis_lucifugus
ENSCAFG00020013161	-	74	97.143	ENSMLUG00000013577	-	92	88.462	Myotis_lucifugus
ENSCAFG00020013161	-	74	97.143	ENSMLUG00000029201	-	74	88.462	Myotis_lucifugus
ENSCAFG00020013161	-	74	97.143	ENSMLUG00000026149	-	74	88.462	Myotis_lucifugus
ENSCAFG00020013161	-	74	75.714	ENSMLUG00000026269	-	74	69.231	Myotis_lucifugus
ENSCAFG00020013161	-	67	82.540	ENSNGAG00000005851	-	74	82.540	Nannospalax_galili
ENSCAFG00020013161	-	74	97.143	ENSNGAG00000024292	-	91	88.462	Nannospalax_galili
ENSCAFG00020013161	-	74	94.286	ENSNBRG00000011682	snrpf	80	85.897	Neolamprologus_brichardi
ENSCAFG00020013161	-	74	65.714	ENSMEUG00000000671	SNRPF	92	60.256	Notamacropus_eugenii
ENSCAFG00020013161	-	74	97.143	ENSODEG00000010328	-	92	88.462	Octodon_degus
ENSCAFG00020013161	-	74	97.143	ENSOCUG00000010925	SNRPF	69	88.462	Oryctolagus_cuniculus
ENSCAFG00020013161	-	74	91.429	ENSORLG00020008216	snrpf	92	83.333	Oryzias_latipes_hni
ENSCAFG00020013161	-	74	91.429	ENSORLG00015007418	snrpf	92	83.333	Oryzias_latipes_hsok
ENSCAFG00020013161	-	74	92.857	ENSOMEG00000003018	snrpf	92	84.615	Oryzias_melastigma
ENSCAFG00020013161	-	74	95.714	ENSOGAG00000030323	-	91	87.179	Otolemur_garnettii
ENSCAFG00020013161	-	84	88.608	ENSOARG00000011853	-	76	81.609	Ovis_aries
ENSCAFG00020013161	-	83	69.231	ENSPPAG00000037544	-	87	69.231	Pan_paniscus
ENSCAFG00020013161	-	83	67.949	ENSPPAG00000037479	-	93	67.949	Pan_paniscus
ENSCAFG00020013161	-	74	97.143	ENSPPRG00000005875	-	91	88.462	Panthera_pardus
ENSCAFG00020013161	-	83	67.949	ENSPPRG00000007449	-	80	67.949	Panthera_pardus
ENSCAFG00020013161	-	74	97.143	ENSPTIG00000007520	SNRPF	91	88.462	Panthera_tigris_altaica
ENSCAFG00020013161	-	74	72.857	ENSPTIG00000005117	-	93	66.667	Panthera_tigris_altaica
ENSCAFG00020013161	-	83	66.667	ENSPTRG00000047717	-	93	66.667	Pan_troglodytes
ENSCAFG00020013161	-	83	69.231	ENSPTRG00000043814	-	87	69.231	Pan_troglodytes
ENSCAFG00020013161	-	74	94.286	ENSPKIG00000014784	snrpf	86	85.897	Paramormyrops_kingsleyae
ENSCAFG00020013161	-	74	97.143	ENSPSIG00000016462	SNRPF	91	88.462	Pelodiscus_sinensis
ENSCAFG00020013161	-	74	92.857	ENSPMGG00000023548	snrpf	92	84.615	Periophthalmus_magnuspinnatus
ENSCAFG00020013161	-	74	97.143	ENSPEMG00000023326	Snrpf	91	88.462	Peromyscus_maniculatus_bairdii
ENSCAFG00020013161	-	74	94.286	ENSPLAG00000023932	snrpf	92	85.897	Poecilia_latipinna
ENSCAFG00020013161	-	74	94.286	ENSPMEG00000003377	snrpf	92	85.897	Poecilia_mexicana
ENSCAFG00020013161	-	74	94.286	ENSPREG00000022635	snrpf	90	85.897	Poecilia_reticulata
ENSCAFG00020013161	-	74	97.143	ENSPPYG00000004847	-	91	88.462	Pongo_abelii
ENSCAFG00020013161	-	74	97.143	ENSPCOG00000023833	-	91	88.462	Propithecus_coquereli
ENSCAFG00020013161	-	74	97.143	ENSPVAG00000009036	SNRPF	91	88.462	Pteropus_vampyrus
ENSCAFG00020013161	-	74	94.286	ENSPNYG00000021712	snrpf	92	85.897	Pundamilia_nyererei
ENSCAFG00020013161	-	74	92.857	ENSPNAG00000019117	snrpf	92	84.615	Pygocentrus_nattereri
ENSCAFG00020013161	-	74	97.143	ENSRNOG00000005556	Snrpf	91	88.462	Rattus_norvegicus
ENSCAFG00020013161	-	74	94.286	ENSRBIG00000030414	-	87	88.000	Rhinopithecus_bieti
ENSCAFG00020013161	-	74	94.286	ENSRROG00000021975	-	87	88.000	Rhinopithecus_roxellana
ENSCAFG00020013161	-	72	57.971	YPR182W	SMX3	80	57.971	Saccharomyces_cerevisiae
ENSCAFG00020013161	-	74	97.143	ENSSBOG00000036179	-	91	88.462	Saimiri_boliviensis_boliviensis
ENSCAFG00020013161	-	74	97.143	ENSSBOG00000012868	-	91	88.462	Saimiri_boliviensis_boliviensis
ENSCAFG00020013161	-	74	78.571	ENSSBOG00000027638	-	90	71.795	Saimiri_boliviensis_boliviensis
ENSCAFG00020013161	-	74	81.429	ENSSBOG00000032297	-	90	74.359	Saimiri_boliviensis_boliviensis
ENSCAFG00020013161	-	74	97.143	ENSSHAG00000012294	SNRPF	70	88.462	Sarcophilus_harrisii
ENSCAFG00020013161	-	64	95.000	ENSSFOG00015021523	snrpf	90	95.000	Scleropages_formosus
ENSCAFG00020013161	-	74	92.857	ENSSMAG00000005533	snrpf	90	84.615	Scophthalmus_maximus
ENSCAFG00020013161	-	64	95.000	ENSSDUG00000016283	snrpf	71	95.000	Seriola_dumerili
ENSCAFG00020013161	-	78	75.342	ENSSLDG00000003885	-	89	75.342	Seriola_lalandi_dorsalis
ENSCAFG00020013161	-	74	94.286	ENSSLDG00000005119	snrpf	91	85.897	Seriola_lalandi_dorsalis
ENSCAFG00020013161	-	74	97.143	ENSSPUG00000014590	-	92	88.462	Sphenodon_punctatus
ENSCAFG00020013161	-	74	94.286	ENSSPAG00000003283	snrpf	89	85.897	Stegastes_partitus
ENSCAFG00020013161	-	74	97.143	ENSSSCG00000000895	SNRPF	91	88.462	Sus_scrofa
ENSCAFG00020013161	-	62	91.379	ENSTRUG00000014956	snrpf	96	81.818	Takifugu_rubripes
ENSCAFG00020013161	-	74	92.857	ENSTNIG00000012672	snrpf	91	84.615	Tetraodon_nigroviridis
ENSCAFG00020013161	-	74	65.714	ENSTTRG00000006070	SNRPF	91	60.256	Tursiops_truncatus
ENSCAFG00020013161	-	80	82.667	ENSUAMG00000001101	-	88	82.667	Ursus_americanus
ENSCAFG00020013161	-	74	97.143	ENSUAMG00000008176	-	91	88.462	Ursus_americanus
ENSCAFG00020013161	-	74	87.143	ENSUMAG00000006177	-	88	82.667	Ursus_maritimus
ENSCAFG00020013161	-	74	97.143	ENSUMAG00000003528	-	91	88.462	Ursus_maritimus
ENSCAFG00020013161	-	74	97.143	ENSVPAG00000008712	-	91	88.462	Vicugna_pacos
ENSCAFG00020013161	-	78	90.411	ENSVVUG00000023821	-	94	90.411	Vulpes_vulpes
ENSCAFG00020013161	-	74	70.833	ENSXETG00000021630	snrpf	92	65.000	Xenopus_tropicalis
ENSCAFG00020013161	-	74	94.286	ENSXCOG00000013860	snrpf	90	85.897	Xiphophorus_couchianus
ENSCAFG00020013161	-	74	94.286	ENSXMAG00000015448	snrpf	92	85.897	Xiphophorus_maculatus