EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020013203 (Gene tree)
Gene ID: 112658661
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 16868 bases
Position: chrQKWQ01002411.1:16610183-16627050
Accession: 112658661
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020016463	zf-U11-48K	PF05253.12	2.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020019100	SNRNP48-201	1569	-	ENSCAFP00020016463	340 (aa)	XP_025300667	UPI000DC6C746

Gene Model

Click here to download ENSCAFG00020013203's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020013203's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020013203	SNRNP48	99	91.988	ENSG00000168566	SNRNP48	99	91.988	Homo_sapiens
ENSCAFG00020013203	SNRNP48	81	46.853	ENSAPOG00000021430	snrnp48	96	43.143	Acanthochromis_polyacanthus
ENSCAFG00020013203	SNRNP48	99	93.043	ENSAMEG00000017349	SNRNP48	99	93.043	Ailuropoda_melanoleuca
ENSCAFG00020013203	SNRNP48	82	46.127	ENSACIG00000002032	snrnp48	96	43.155	Amphilophus_citrinellus
ENSCAFG00020013203	SNRNP48	81	47.350	ENSAOCG00000010562	snrnp48	96	43.804	Amphiprion_ocellaris
ENSCAFG00020013203	SNRNP48	81	47.331	ENSAPEG00000003231	snrnp48	96	43.768	Amphiprion_percula
ENSCAFG00020013203	SNRNP48	82	47.405	ENSATEG00000020210	snrnp48	89	46.645	Anabas_testudineus
ENSCAFG00020013203	SNRNP48	83	64.041	ENSACAG00000002811	SNRNP48	90	64.041	Anolis_carolinensis
ENSCAFG00020013203	SNRNP48	99	91.395	ENSANAG00000033538	SNRNP48	99	91.395	Aotus_nancymaae
ENSCAFG00020013203	SNRNP48	92	45.794	ENSAMXG00000015309	snrnp48	99	44.160	Astyanax_mexicanus
ENSCAFG00020013203	SNRNP48	99	87.278	ENSBTAG00000001123	SNRNP48	99	88.166	Bos_taurus
ENSCAFG00020013203	SNRNP48	99	91.691	ENSCJAG00000021330	SNRNP48	99	91.691	Callithrix_jacchus
ENSCAFG00020013203	SNRNP48	100	99.706	ENSCAFG00000009574	SNRNP48	84	99.706	Canis_familiaris
ENSCAFG00020013203	SNRNP48	99	88.166	ENSCHIG00000015216	SNRNP48	99	89.053	Capra_hircus
ENSCAFG00020013203	SNRNP48	99	89.318	ENSTSYG00000000698	SNRNP48	99	89.318	Carlito_syrichta
ENSCAFG00020013203	SNRNP48	90	84.416	ENSCAPG00000006768	SNRNP48	100	84.416	Cavia_aperea
ENSCAFG00020013203	SNRNP48	99	87.500	ENSCPOG00000007910	SNRNP48	99	87.500	Cavia_porcellus
ENSCAFG00020013203	SNRNP48	99	90.208	ENSCCAG00000035652	SNRNP48	99	90.208	Cebus_capucinus
ENSCAFG00020013203	SNRNP48	99	91.395	ENSCATG00000033947	SNRNP48	99	91.395	Cercocebus_atys
ENSCAFG00020013203	SNRNP48	99	88.095	ENSCLAG00000003765	SNRNP48	99	88.095	Chinchilla_lanigera
ENSCAFG00020013203	SNRNP48	99	91.988	ENSCSAG00000007409	SNRNP48	99	91.988	Chlorocebus_sabaeus
ENSCAFG00020013203	SNRNP48	84	65.232	ENSCPBG00000019146	SNRNP48	92	65.232	Chrysemys_picta_bellii
ENSCAFG00020013203	SNRNP48	99	91.988	ENSCANG00000030017	SNRNP48	99	91.988	Colobus_angolensis_palliatus
ENSCAFG00020013203	SNRNP48	98	69.578	ENSCGRG00001008805	-	94	68.976	Cricetulus_griseus_chok1gshd
ENSCAFG00020013203	SNRNP48	99	88.131	ENSCGRG00001001076	-	99	87.834	Cricetulus_griseus_chok1gshd
ENSCAFG00020013203	SNRNP48	99	88.131	ENSCGRG00000007781	Snrnp48	99	87.834	Cricetulus_griseus_crigri
ENSCAFG00020013203	SNRNP48	76	47.510	ENSCSEG00000000722	snrnp48	72	47.510	Cynoglossus_semilaevis
ENSCAFG00020013203	SNRNP48	97	42.274	ENSCVAG00000019829	snrnp48	90	41.737	Cyprinodon_variegatus
ENSCAFG00020013203	SNRNP48	81	46.127	ENSDARG00000039989	snrnp48	87	46.711	Danio_rerio
ENSCAFG00020013203	SNRNP48	98	91.642	ENSDNOG00000014978	SNRNP48	99	90.855	Dasypus_novemcinctus
ENSCAFG00020013203	SNRNP48	99	87.500	ENSDORG00000015140	Snrnp48	99	87.240	Dipodomys_ordii
ENSCAFG00020013203	SNRNP48	99	94.030	ENSEASG00005012021	SNRNP48	99	93.750	Equus_asinus_asinus
ENSCAFG00020013203	SNRNP48	99	94.643	ENSECAG00000026937	SNRNP48	99	94.643	Equus_caballus
ENSCAFG00020013203	SNRNP48	99	68.732	ENSEEUG00000015437	SNRNP48	99	68.437	Erinaceus_europaeus
ENSCAFG00020013203	SNRNP48	87	46.535	ENSELUG00000009766	snrnp48	94	43.567	Esox_lucius
ENSCAFG00020013203	SNRNP48	99	95.549	ENSFCAG00000018853	SNRNP48	99	95.549	Felis_catus
ENSCAFG00020013203	SNRNP48	83	65.411	ENSFALG00000007797	SNRNP48	93	65.411	Ficedula_albicollis
ENSCAFG00020013203	SNRNP48	99	88.060	ENSFDAG00000009231	SNRNP48	99	87.798	Fukomys_damarensis
ENSCAFG00020013203	SNRNP48	59	54.455	ENSFHEG00000014647	snrnp48	97	48.421	Fundulus_heteroclitus
ENSCAFG00020013203	SNRNP48	72	47.984	ENSGMOG00000018599	-	81	47.566	Gadus_morhua
ENSCAFG00020013203	SNRNP48	82	63.763	ENSGALG00000013005	SNRNP48	89	67.300	Gallus_gallus
ENSCAFG00020013203	SNRNP48	72	48.617	ENSGAFG00000021639	snrnp48	92	43.413	Gambusia_affinis
ENSCAFG00020013203	SNRNP48	71	49.587	ENSGACG00000017756	-	96	44.023	Gasterosteus_aculeatus
ENSCAFG00020013203	SNRNP48	84	65.000	ENSGAGG00000000865	SNRNP48	97	65.000	Gopherus_agassizii
ENSCAFG00020013203	SNRNP48	99	91.988	ENSGGOG00000013220	SNRNP48	99	91.988	Gorilla_gorilla
ENSCAFG00020013203	SNRNP48	96	40.588	ENSHBUG00000017066	snrnp48	95	41.840	Haplochromis_burtoni
ENSCAFG00020013203	SNRNP48	99	88.955	ENSHGLG00000015241	SNRNP48	99	88.690	Heterocephalus_glaber_female
ENSCAFG00020013203	SNRNP48	99	88.955	ENSHGLG00100010027	SNRNP48	99	88.690	Heterocephalus_glaber_male
ENSCAFG00020013203	SNRNP48	71	45.679	ENSHCOG00000014066	snrnp48	92	40.909	Hippocampus_comes
ENSCAFG00020013203	SNRNP48	99	92.857	ENSSTOG00000014635	SNRNP48	99	92.857	Ictidomys_tridecemlineatus
ENSCAFG00020013203	SNRNP48	100	84.706	ENSJJAG00000011495	Snrnp48	100	84.706	Jaculus_jaculus
ENSCAFG00020013203	SNRNP48	90	43.322	ENSKMAG00000016514	snrnp48	80	45.552	Kryptolebias_marmoratus
ENSCAFG00020013203	SNRNP48	76	47.893	ENSLBEG00000026249	snrnp48	95	44.745	Labrus_bergylta
ENSCAFG00020013203	SNRNP48	96	53.593	ENSLACG00000003958	SNRNP48	98	52.478	Latimeria_chalumnae
ENSCAFG00020013203	SNRNP48	83	50.519	ENSLOCG00000004187	snrnp48	95	48.961	Lepisosteus_oculatus
ENSCAFG00020013203	SNRNP48	98	88.024	ENSLAFG00000011152	SNRNP48	99	88.024	Loxodonta_africana
ENSCAFG00020013203	SNRNP48	99	92.285	ENSMFAG00000045216	SNRNP48	99	92.285	Macaca_fascicularis
ENSCAFG00020013203	SNRNP48	99	92.285	ENSMMUG00000014785	SNRNP48	99	92.285	Macaca_mulatta
ENSCAFG00020013203	SNRNP48	99	91.988	ENSMNEG00000042269	SNRNP48	99	91.988	Macaca_nemestrina
ENSCAFG00020013203	SNRNP48	99	92.285	ENSMLEG00000034004	SNRNP48	99	92.285	Mandrillus_leucophaeus
ENSCAFG00020013203	SNRNP48	76	47.308	ENSMAMG00000018673	snrnp48	83	44.118	Mastacembelus_armatus
ENSCAFG00020013203	SNRNP48	82	64.966	ENSMGAG00000006037	SNRNP48	99	65.753	Meleagris_gallopavo
ENSCAFG00020013203	SNRNP48	99	88.988	ENSMAUG00000011944	Snrnp48	99	88.690	Mesocricetus_auratus
ENSCAFG00020013203	SNRNP48	99	89.911	ENSMICG00000012497	SNRNP48	99	89.911	Microcebus_murinus
ENSCAFG00020013203	SNRNP48	99	88.393	ENSMOCG00000015555	Snrnp48	99	88.095	Microtus_ochrogaster
ENSCAFG00020013203	SNRNP48	54	51.892	ENSMMOG00000003072	-	58	51.892	Mola_mola
ENSCAFG00020013203	SNRNP48	98	71.594	ENSMODG00000009996	SNRNP48	93	71.594	Monodelphis_domestica
ENSCAFG00020013203	SNRNP48	77	48.864	ENSMALG00000005725	snrnp48	95	45.345	Monopterus_albus
ENSCAFG00020013203	SNRNP48	99	86.647	MGP_CAROLIEiJ_G0018441	Snrnp48	99	86.647	Mus_caroli
ENSCAFG00020013203	SNRNP48	99	86.905	ENSMUSG00000021431	Snrnp48	99	86.905	Mus_musculus
ENSCAFG00020013203	SNRNP48	99	86.647	MGP_PahariEiJ_G0019509	Snrnp48	99	86.647	Mus_pahari
ENSCAFG00020013203	SNRNP48	99	86.053	MGP_SPRETEiJ_G0019321	Snrnp48	99	86.053	Mus_spretus
ENSCAFG00020013203	SNRNP48	99	87.202	ENSNGAG00000004849	Snrnp48	99	87.202	Nannospalax_galili
ENSCAFG00020013203	SNRNP48	74	46.484	ENSNBRG00000012127	snrnp48	95	41.349	Neolamprologus_brichardi
ENSCAFG00020013203	SNRNP48	99	92.285	ENSNLEG00000011667	SNRNP48	99	92.285	Nomascus_leucogenys
ENSCAFG00020013203	SNRNP48	95	77.950	ENSOPRG00000015471	SNRNP48	99	78.571	Ochotona_princeps
ENSCAFG00020013203	SNRNP48	76	46.360	ENSONIG00000001520	snrnp48	96	41.618	Oreochromis_niloticus
ENSCAFG00020013203	SNRNP48	57	64.904	ENSOANG00000019888	-	100	65.865	Ornithorhynchus_anatinus
ENSCAFG00020013203	SNRNP48	84	88.811	ENSOCUG00000005168	SNRNP48	99	88.449	Oryctolagus_cuniculus
ENSCAFG00020013203	SNRNP48	88	46.429	ENSORLG00000015654	snrnp48	93	44.868	Oryzias_latipes
ENSCAFG00020013203	SNRNP48	88	45.455	ENSORLG00020015976	snrnp48	79	44.282	Oryzias_latipes_hni
ENSCAFG00020013203	SNRNP48	88	46.104	ENSORLG00015022379	snrnp48	80	44.868	Oryzias_latipes_hsok
ENSCAFG00020013203	SNRNP48	83	47.222	ENSOMEG00000022007	snrnp48	95	43.478	Oryzias_melastigma
ENSCAFG00020013203	SNRNP48	91	89.389	ENSOGAG00000005275	SNRNP48	96	89.590	Otolemur_garnettii
ENSCAFG00020013203	SNRNP48	84	89.199	ENSOARG00000017319	SNRNP48	100	89.199	Ovis_aries
ENSCAFG00020013203	SNRNP48	99	92.285	ENSPPAG00000032873	SNRNP48	99	92.285	Pan_paniscus
ENSCAFG00020013203	SNRNP48	99	95.549	ENSPPRG00000004283	SNRNP48	99	95.549	Panthera_pardus
ENSCAFG00020013203	SNRNP48	84	96.167	ENSPTIG00000013502	SNRNP48	100	96.167	Panthera_tigris_altaica
ENSCAFG00020013203	SNRNP48	99	92.285	ENSPTRG00000017703	SNRNP48	99	92.285	Pan_troglodytes
ENSCAFG00020013203	SNRNP48	99	92.285	ENSPANG00000000771	SNRNP48	99	92.285	Papio_anubis
ENSCAFG00020013203	SNRNP48	94	45.994	ENSPKIG00000013703	snrnp48	61	49.153	Paramormyrops_kingsleyae
ENSCAFG00020013203	SNRNP48	88	61.392	ENSPSIG00000002213	SNRNP48	97	61.465	Pelodiscus_sinensis
ENSCAFG00020013203	SNRNP48	79	46.377	ENSPMGG00000008120	snrnp48	96	46.377	Periophthalmus_magnuspinnatus
ENSCAFG00020013203	SNRNP48	99	88.724	ENSPEMG00000008872	Snrnp48	99	88.427	Peromyscus_maniculatus_bairdii
ENSCAFG00020013203	SNRNP48	72	50.403	ENSPFOG00000003578	snrnp48	92	44.444	Poecilia_formosa
ENSCAFG00020013203	SNRNP48	66	49.558	ENSPLAG00000002290	snrnp48	76	49.558	Poecilia_latipinna
ENSCAFG00020013203	SNRNP48	72	49.597	ENSPMEG00000018033	snrnp48	92	43.844	Poecilia_mexicana
ENSCAFG00020013203	SNRNP48	71	49.794	ENSPREG00000018541	snrnp48	92	44.444	Poecilia_reticulata
ENSCAFG00020013203	SNRNP48	99	90.801	ENSPPYG00000016209	SNRNP48	99	90.801	Pongo_abelii
ENSCAFG00020013203	SNRNP48	79	69.776	ENSPCAG00000011991	SNRNP48	98	70.611	Procavia_capensis
ENSCAFG00020013203	SNRNP48	99	90.179	ENSPVAG00000002854	SNRNP48	99	90.179	Pteropus_vampyrus
ENSCAFG00020013203	SNRNP48	74	47.266	ENSPNYG00000015399	snrnp48	94	44.518	Pundamilia_nyererei
ENSCAFG00020013203	SNRNP48	99	88.131	ENSRNOG00000013756	Snrnp48	99	88.131	Rattus_norvegicus
ENSCAFG00020013203	SNRNP48	91	91.883	ENSRBIG00000043856	SNRNP48	96	92.384	Rhinopithecus_bieti
ENSCAFG00020013203	SNRNP48	99	91.988	ENSRROG00000043229	SNRNP48	99	91.988	Rhinopithecus_roxellana
ENSCAFG00020013203	SNRNP48	99	91.395	ENSSBOG00000019486	SNRNP48	99	91.395	Saimiri_boliviensis_boliviensis
ENSCAFG00020013203	SNRNP48	97	71.221	ENSSHAG00000014483	SNRNP48	99	71.221	Sarcophilus_harrisii
ENSCAFG00020013203	SNRNP48	73	50.598	ENSSFOG00015006610	snrnp48	71	47.896	Scleropages_formosus
ENSCAFG00020013203	SNRNP48	87	44.444	ENSSDUG00000014953	snrnp48	95	42.730	Seriola_dumerili
ENSCAFG00020013203	SNRNP48	83	46.392	ENSSLDG00000005989	snrnp48	97	42.029	Seriola_lalandi_dorsalis
ENSCAFG00020013203	SNRNP48	84	64.765	ENSSPUG00000006257	SNRNP48	85	64.765	Sphenodon_punctatus
ENSCAFG00020013203	SNRNP48	77	47.601	ENSSPAG00000006454	snrnp48	92	44.277	Stegastes_partitus
ENSCAFG00020013203	SNRNP48	85	63.514	ENSTGUG00000007575	SNRNP48	95	63.514	Taeniopygia_guttata
ENSCAFG00020013203	SNRNP48	73	49.801	ENSTRUG00000007031	snrnp48	94	45.266	Takifugu_rubripes
ENSCAFG00020013203	SNRNP48	74	45.490	ENSTNIG00000012977	-	72	46.914	Tetraodon_nigroviridis
ENSCAFG00020013203	SNRNP48	99	74.107	ENSTBEG00000015620	SNRNP48	99	74.107	Tupaia_belangeri
ENSCAFG00020013203	SNRNP48	99	90.208	ENSTTRG00000016715	SNRNP48	99	90.208	Tursiops_truncatus
ENSCAFG00020013203	SNRNP48	99	96.142	ENSUAMG00000003690	SNRNP48	99	96.142	Ursus_americanus
ENSCAFG00020013203	SNRNP48	84	88.850	ENSVPAG00000003557	SNRNP48	100	88.850	Vicugna_pacos
ENSCAFG00020013203	SNRNP48	100	99.118	ENSVVUG00000004996	SNRNP48	100	99.118	Vulpes_vulpes
ENSCAFG00020013203	SNRNP48	85	53.020	ENSXETG00000020447	snrnp48	97	50.888	Xenopus_tropicalis
ENSCAFG00020013203	SNRNP48	66	49.339	ENSXCOG00000004478	snrnp48	68	49.339	Xiphophorus_couchianus
ENSCAFG00020013203	SNRNP48	81	48.188	ENSXMAG00000013595	snrnp48	92	44.444	Xiphophorus_maculatus