EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020013237 (Gene tree)
Gene ID: 112672374
Gene Symbol: TRUB1
Alias: PUS4
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 36355 bases
Position: chrQKWQ01001042.1:25955881-25992235
Accession: 112672374
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020016524	TruB_N	PF01509.18	1.3e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020019176	TRUB1-201	1053	-	ENSCAFP00020016524	350 (aa)	XP_025323121	UPI000DC6C452

Gene Model

Click here to download ENSCAFG00020013237's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020013237's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020013237	TRUB1	99	92.837	ENSG00000165832	TRUB1	99	92.837	Homo_sapiens
ENSCAFG00020013237	TRUB1	70	68.980	ENSAPOG00000020565	trub1	89	68.699	Acanthochromis_polyacanthus
ENSCAFG00020013237	TRUB1	99	95.726	ENSAMEG00000014931	TRUB1	99	95.726	Ailuropoda_melanoleuca
ENSCAFG00020013237	TRUB1	81	57.394	ENSACIG00000003060	trub1	94	57.394	Amphilophus_citrinellus
ENSCAFG00020013237	TRUB1	70	68.980	ENSAOCG00000017188	trub1	89	68.699	Amphiprion_ocellaris
ENSCAFG00020013237	TRUB1	70	68.293	ENSAPEG00000015209	trub1	89	68.293	Amphiprion_percula
ENSCAFG00020013237	TRUB1	69	69.295	ENSATEG00000023291	trub1	86	69.295	Anabas_testudineus
ENSCAFG00020013237	TRUB1	79	76.364	ENSAPLG00000006808	TRUB1	99	76.364	Anas_platyrhynchos
ENSCAFG00020013237	TRUB1	77	72.119	ENSACAG00000009282	TRUB1	97	72.119	Anolis_carolinensis
ENSCAFG00020013237	TRUB1	95	95.210	ENSANAG00000022870	TRUB1	99	93.983	Aotus_nancymaae
ENSCAFG00020013237	TRUB1	72	67.460	ENSACLG00000000823	trub1	91	67.460	Astatotilapia_calliptera
ENSCAFG00020013237	TRUB1	77	65.926	ENSAMXG00000015845	trub1	90	65.926	Astyanax_mexicanus
ENSCAFG00020013237	TRUB1	98	93.860	ENSBTAG00000012955	TRUB1	99	93.162	Bos_taurus
ENSCAFG00020013237	TRUB1	99	94.000	ENSCJAG00000047815	TRUB1	99	94.000	Callithrix_jacchus
ENSCAFG00020013237	TRUB1	100	99.714	ENSCAFG00000011688	TRUB1	100	99.714	Canis_familiaris
ENSCAFG00020013237	TRUB1	98	93.567	ENSCHIG00000020884	TRUB1	99	93.143	Capra_hircus
ENSCAFG00020013237	TRUB1	99	92.286	ENSTSYG00000000446	TRUB1	99	90.857	Carlito_syrichta
ENSCAFG00020013237	TRUB1	72	85.771	ENSCAPG00000017088	TRUB1	99	85.771	Cavia_aperea
ENSCAFG00020013237	TRUB1	70	84.898	ENSCPOG00000040236	-	100	84.898	Cavia_porcellus
ENSCAFG00020013237	TRUB1	71	79.839	ENSCPOG00000030129	-	76	93.333	Cavia_porcellus
ENSCAFG00020013237	TRUB1	96	94.345	ENSCCAG00000028842	TRUB1	99	93.143	Cebus_capucinus
ENSCAFG00020013237	TRUB1	99	93.696	ENSCATG00000033431	TRUB1	99	93.696	Cercocebus_atys
ENSCAFG00020013237	TRUB1	70	88.163	ENSCLAG00000008664	TRUB1	100	88.163	Chinchilla_lanigera
ENSCAFG00020013237	TRUB1	99	93.983	ENSCSAG00000004891	TRUB1	99	93.983	Chlorocebus_sabaeus
ENSCAFG00020013237	TRUB1	100	78.286	ENSCHOG00000011931	TRUB1	100	78.286	Choloepus_hoffmanni
ENSCAFG00020013237	TRUB1	78	80.147	ENSCPBG00000003051	TRUB1	94	80.147	Chrysemys_picta_bellii
ENSCAFG00020013237	TRUB1	99	93.983	ENSCANG00000029445	TRUB1	99	93.983	Colobus_angolensis_palliatus
ENSCAFG00020013237	TRUB1	80	80.357	ENSCGRG00001010322	-	79	80.272	Cricetulus_griseus_chok1gshd
ENSCAFG00020013237	TRUB1	82	79.791	ENSCGRG00001016772	-	91	79.599	Cricetulus_griseus_chok1gshd
ENSCAFG00020013237	TRUB1	80	89.286	ENSCGRG00000010806	Trub1	91	88.294	Cricetulus_griseus_crigri
ENSCAFG00020013237	TRUB1	70	64.898	ENSCSEG00000011261	trub1	94	58.966	Cynoglossus_semilaevis
ENSCAFG00020013237	TRUB1	70	68.163	ENSCVAG00000008791	trub1	75	68.163	Cyprinodon_variegatus
ENSCAFG00020013237	TRUB1	80	64.286	ENSDARG00000053805	trub1	93	64.286	Danio_rerio
ENSCAFG00020013237	TRUB1	97	88.235	ENSDNOG00000001069	TRUB1	100	87.464	Dasypus_novemcinctus
ENSCAFG00020013237	TRUB1	99	88.825	ENSDORG00000010431	Trub1	99	88.252	Dipodomys_ordii
ENSCAFG00020013237	TRUB1	81	79.412	ENSETEG00000009183	TRUB1	81	80.392	Echinops_telfairi
ENSCAFG00020013237	TRUB1	96	94.955	ENSEASG00005014739	TRUB1	100	94.571	Equus_asinus_asinus
ENSCAFG00020013237	TRUB1	96	94.955	ENSECAG00000007177	TRUB1	100	94.571	Equus_caballus
ENSCAFG00020013237	TRUB1	99	77.374	ENSEEUG00000013993	TRUB1	99	77.654	Erinaceus_europaeus
ENSCAFG00020013237	TRUB1	70	70.204	ENSELUG00000000502	trub1	86	70.204	Esox_lucius
ENSCAFG00020013237	TRUB1	96	95.522	ENSFCAG00000031927	TRUB1	99	95.115	Felis_catus
ENSCAFG00020013237	TRUB1	69	77.083	ENSFALG00000002232	TRUB1	92	77.083	Ficedula_albicollis
ENSCAFG00020013237	TRUB1	69	87.243	ENSFDAG00000008140	TRUB1	99	87.243	Fukomys_damarensis
ENSCAFG00020013237	TRUB1	70	66.939	ENSFHEG00000004016	trub1	84	66.939	Fundulus_heteroclitus
ENSCAFG00020013237	TRUB1	78	75.000	ENSGALG00000009091	TRUB1	97	74.057	Gallus_gallus
ENSCAFG00020013237	TRUB1	68	65.417	ENSGAFG00000009193	trub1	86	64.754	Gambusia_affinis
ENSCAFG00020013237	TRUB1	56	68.718	ENSGACG00000015387	trub1	96	68.718	Gasterosteus_aculeatus
ENSCAFG00020013237	TRUB1	88	73.463	ENSGAGG00000009758	TRUB1	81	78.169	Gopherus_agassizii
ENSCAFG00020013237	TRUB1	99	93.410	ENSGGOG00000004583	TRUB1	99	93.410	Gorilla_gorilla
ENSCAFG00020013237	TRUB1	72	67.460	ENSHBUG00000016787	trub1	91	67.460	Haplochromis_burtoni
ENSCAFG00020013237	TRUB1	100	86.571	ENSHGLG00000015314	TRUB1	100	86.571	Heterocephalus_glaber_female
ENSCAFG00020013237	TRUB1	70	85.714	ENSHGLG00100009183	TRUB1	100	85.714	Heterocephalus_glaber_male
ENSCAFG00020013237	TRUB1	70	68.571	ENSHCOG00000017877	trub1	89	68.571	Hippocampus_comes
ENSCAFG00020013237	TRUB1	79	65.580	ENSIPUG00000017559	trub1	97	65.580	Ictalurus_punctatus
ENSCAFG00020013237	TRUB1	90	93.354	ENSSTOG00000003641	TRUB1	100	88.571	Ictidomys_tridecemlineatus
ENSCAFG00020013237	TRUB1	99	84.527	ENSJJAG00000011800	Trub1	99	84.241	Jaculus_jaculus
ENSCAFG00020013237	TRUB1	72	66.148	ENSKMAG00000006232	trub1	92	66.148	Kryptolebias_marmoratus
ENSCAFG00020013237	TRUB1	76	64.662	ENSLBEG00000026722	trub1	92	64.662	Labrus_bergylta
ENSCAFG00020013237	TRUB1	79	73.551	ENSLACG00000014885	TRUB1	92	73.551	Latimeria_chalumnae
ENSCAFG00020013237	TRUB1	78	70.696	ENSLOCG00000012979	trub1	93	70.696	Lepisosteus_oculatus
ENSCAFG00020013237	TRUB1	99	78.431	ENSLAFG00000015452	TRUB1	99	81.793	Loxodonta_africana
ENSCAFG00020013237	TRUB1	99	93.696	ENSMFAG00000031767	TRUB1	99	93.696	Macaca_fascicularis
ENSCAFG00020013237	TRUB1	99	93.983	ENSMMUG00000001902	TRUB1	99	93.983	Macaca_mulatta
ENSCAFG00020013237	TRUB1	99	89.971	ENSMNEG00000044646	TRUB1	99	89.971	Macaca_nemestrina
ENSCAFG00020013237	TRUB1	99	93.696	ENSMLEG00000042655	TRUB1	99	93.696	Mandrillus_leucophaeus
ENSCAFG00020013237	TRUB1	72	67.460	ENSMZEG00005024095	trub1	91	67.460	Maylandia_zebra
ENSCAFG00020013237	TRUB1	78	74.265	ENSMGAG00000011135	TRUB1	93	74.265	Meleagris_gallopavo
ENSCAFG00020013237	TRUB1	80	85.714	ENSMAUG00000011101	Trub1	89	85.333	Mesocricetus_auratus
ENSCAFG00020013237	TRUB1	100	93.714	ENSMICG00000016324	TRUB1	100	93.714	Microcebus_murinus
ENSCAFG00020013237	TRUB1	93	83.486	ENSMOCG00000017759	Trub1	91	87.375	Microtus_ochrogaster
ENSCAFG00020013237	TRUB1	82	83.916	ENSMODG00000009676	TRUB1	81	82.095	Monodelphis_domestica
ENSCAFG00020013237	TRUB1	99	81.662	MGP_CAROLIEiJ_G0023100	Trub1	89	86.711	Mus_caroli
ENSCAFG00020013237	TRUB1	99	80.516	ENSMUSG00000025086	Trub1	89	85.714	Mus_musculus
ENSCAFG00020013237	TRUB1	99	81.375	MGP_PahariEiJ_G0014588	Trub1	89	87.043	Mus_pahari
ENSCAFG00020013237	TRUB1	99	80.802	MGP_SPRETEiJ_G0024021	Trub1	89	86.047	Mus_spretus
ENSCAFG00020013237	TRUB1	99	97.421	ENSMPUG00000003556	TRUB1	99	97.421	Mustela_putorius_furo
ENSCAFG00020013237	TRUB1	95	90.719	ENSMLUG00000017686	TRUB1	99	87.714	Myotis_lucifugus
ENSCAFG00020013237	TRUB1	99	86.246	ENSNGAG00000018682	Trub1	99	86.246	Nannospalax_galili
ENSCAFG00020013237	TRUB1	70	68.699	ENSNBRG00000023393	trub1	88	68.699	Neolamprologus_brichardi
ENSCAFG00020013237	TRUB1	96	93.750	ENSNLEG00000016345	TRUB1	99	93.410	Nomascus_leucogenys
ENSCAFG00020013237	TRUB1	57	91.045	ENSMEUG00000006603	TRUB1	78	88.152	Notamacropus_eugenii
ENSCAFG00020013237	TRUB1	86	86.755	ENSOPRG00000009371	TRUB1	88	86.755	Ochotona_princeps
ENSCAFG00020013237	TRUB1	99	84.814	ENSODEG00000010854	TRUB1	99	84.814	Octodon_degus
ENSCAFG00020013237	TRUB1	70	68.293	ENSONIG00000007249	trub1	89	68.293	Oreochromis_niloticus
ENSCAFG00020013237	TRUB1	78	81.022	ENSOANG00000001556	TRUB1	90	81.022	Ornithorhynchus_anatinus
ENSCAFG00020013237	TRUB1	100	85.143	ENSOCUG00000009456	TRUB1	100	85.143	Oryctolagus_cuniculus
ENSCAFG00020013237	TRUB1	69	69.295	ENSORLG00000029719	trub1	86	69.295	Oryzias_latipes
ENSCAFG00020013237	TRUB1	69	68.880	ENSORLG00020016767	trub1	85	68.880	Oryzias_latipes_hni
ENSCAFG00020013237	TRUB1	69	68.880	ENSORLG00015014728	trub1	86	68.880	Oryzias_latipes_hsok
ENSCAFG00020013237	TRUB1	69	68.595	ENSOMEG00000014556	trub1	85	68.595	Oryzias_melastigma
ENSCAFG00020013237	TRUB1	100	94.286	ENSOGAG00000015895	TRUB1	100	94.286	Otolemur_garnettii
ENSCAFG00020013237	TRUB1	84	94.702	ENSOARG00000015591	TRUB1	99	89.607	Ovis_aries
ENSCAFG00020013237	TRUB1	99	93.410	ENSPPAG00000043645	TRUB1	99	93.410	Pan_paniscus
ENSCAFG00020013237	TRUB1	96	94.925	ENSPPRG00000007096	TRUB1	99	94.540	Panthera_pardus
ENSCAFG00020013237	TRUB1	96	95.224	ENSPTIG00000006378	TRUB1	99	94.828	Panthera_tigris_altaica
ENSCAFG00020013237	TRUB1	99	93.410	ENSPTRG00000002964	TRUB1	99	93.410	Pan_troglodytes
ENSCAFG00020013237	TRUB1	99	93.983	ENSPANG00000020712	TRUB1	99	93.983	Papio_anubis
ENSCAFG00020013237	TRUB1	78	77.574	ENSPSIG00000012877	TRUB1	93	77.574	Pelodiscus_sinensis
ENSCAFG00020013237	TRUB1	70	65.714	ENSPMGG00000000075	trub1	88	65.714	Periophthalmus_magnuspinnatus
ENSCAFG00020013237	TRUB1	86	85.667	ENSPEMG00000011156	Trub1	88	85.667	Peromyscus_maniculatus_bairdii
ENSCAFG00020013237	TRUB1	82	83.217	ENSPCIG00000009729	TRUB1	79	82.192	Phascolarctos_cinereus
ENSCAFG00020013237	TRUB1	70	66.531	ENSPFOG00000009950	trub1	90	66.531	Poecilia_formosa
ENSCAFG00020013237	TRUB1	78	63.004	ENSPLAG00000013855	trub1	86	66.531	Poecilia_latipinna
ENSCAFG00020013237	TRUB1	76	63.670	ENSPMEG00000009064	trub1	88	66.531	Poecilia_mexicana
ENSCAFG00020013237	TRUB1	70	67.347	ENSPREG00000003343	trub1	88	67.347	Poecilia_reticulata
ENSCAFG00020013237	TRUB1	96	93.452	ENSPPYG00000002676	TRUB1	99	93.123	Pongo_abelii
ENSCAFG00020013237	TRUB1	99	76.705	ENSPCAG00000008427	TRUB1	99	76.136	Procavia_capensis
ENSCAFG00020013237	TRUB1	100	88.571	ENSPCOG00000024360	TRUB1	100	88.571	Propithecus_coquereli
ENSCAFG00020013237	TRUB1	75	94.318	ENSPVAG00000007575	TRUB1	100	94.318	Pteropus_vampyrus
ENSCAFG00020013237	TRUB1	72	67.460	ENSPNYG00000018614	trub1	91	67.460	Pundamilia_nyererei
ENSCAFG00020013237	TRUB1	74	59.615	ENSPNAG00000006881	trub1	84	59.615	Pygocentrus_nattereri
ENSCAFG00020013237	TRUB1	99	82.521	ENSRNOG00000017321	Trub1	88	87.043	Rattus_norvegicus
ENSCAFG00020013237	TRUB1	99	83.668	ENSRBIG00000033423	TRUB1	99	83.668	Rhinopithecus_bieti
ENSCAFG00020013237	TRUB1	99	93.410	ENSRROG00000033902	TRUB1	99	93.410	Rhinopithecus_roxellana
ENSCAFG00020013237	TRUB1	96	94.643	ENSSBOG00000024237	TRUB1	99	93.429	Saimiri_boliviensis_boliviensis
ENSCAFG00020013237	TRUB1	73	82.031	ENSSHAG00000009346	TRUB1	86	82.031	Sarcophilus_harrisii
ENSCAFG00020013237	TRUB1	69	70.370	ENSSFOG00015022124	trub1	83	70.370	Scleropages_formosus
ENSCAFG00020013237	TRUB1	70	69.106	ENSSMAG00000001020	trub1	88	69.106	Scophthalmus_maximus
ENSCAFG00020013237	TRUB1	69	69.583	ENSSDUG00000016414	trub1	88	69.512	Seriola_dumerili
ENSCAFG00020013237	TRUB1	69	70.000	ENSSLDG00000015486	trub1	88	69.919	Seriola_lalandi_dorsalis
ENSCAFG00020013237	TRUB1	80	77.500	ENSSPUG00000001642	TRUB1	96	77.500	Sphenodon_punctatus
ENSCAFG00020013237	TRUB1	75	66.920	ENSSPAG00000001217	trub1	94	66.920	Stegastes_partitus
ENSCAFG00020013237	TRUB1	100	88.571	ENSSSCG00000010653	TRUB1	100	88.571	Sus_scrofa
ENSCAFG00020013237	TRUB1	77	76.667	ENSTGUG00000010971	TRUB1	97	76.471	Taeniopygia_guttata
ENSCAFG00020013237	TRUB1	72	78.656	ENSTBEG00000002880	TRUB1	99	78.656	Tupaia_belangeri
ENSCAFG00020013237	TRUB1	72	90.040	ENSTTRG00000005767	TRUB1	100	92.424	Tursiops_truncatus
ENSCAFG00020013237	TRUB1	99	97.421	ENSUAMG00000024876	TRUB1	99	97.421	Ursus_americanus
ENSCAFG00020013237	TRUB1	99	94.269	ENSUMAG00000002411	TRUB1	99	94.269	Ursus_maritimus
ENSCAFG00020013237	TRUB1	99	93.983	ENSVPAG00000005507	TRUB1	99	93.983	Vicugna_pacos
ENSCAFG00020013237	TRUB1	100	98.857	ENSVVUG00000010085	TRUB1	84	98.857	Vulpes_vulpes
ENSCAFG00020013237	TRUB1	78	66.912	ENSXETG00000023828	trub1	98	66.912	Xenopus_tropicalis
ENSCAFG00020013237	TRUB1	76	62.642	ENSXCOG00000017847	trub1	86	65.432	Xiphophorus_couchianus
ENSCAFG00020013237	TRUB1	76	62.921	ENSXMAG00000014701	trub1	88	65.714	Xiphophorus_maculatus