EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020013537 (Gene tree)
Gene ID: 112655680
Gene Symbol: RAB5C
Alias: RAB5CL|RABL
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 4801 bases
Position: chrQKWQ01000972.1:2616668-2621468
Accession: 112655680
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020016903	MMR_HSR1	PF01926.23	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020019608	RAB5C-201	1443	-	ENSCAFP00020016903	216 (aa)	XP_025296684	UPI000013317E

Gene Model

Click here to download ENSCAFG00020013537's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020013537's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020013537	RAB5C	89	44.330	ENSCAFG00020015406	-	96	44.330
ENSCAFG00020013537	RAB5C	90	42.995	ENSCAFG00020008478	RAB11A	94	42.995
ENSCAFG00020013537	RAB5C	97	86.124	ENSCAFG00020026094	RAB5B	97	86.124
ENSCAFG00020013537	RAB5C	55	31.148	ENSCAFG00020016164	ARL8A	62	31.148
ENSCAFG00020013537	RAB5C	100	87.500	ENSCAFG00020027287	RAB5A	100	87.500
ENSCAFG00020013537	RAB5C	93	38.164	ENSCAFG00020020861	RAB33B	89	38.164
ENSCAFG00020013537	RAB5C	55	31.967	ENSCAFG00020009368	ARL8B	62	31.967
ENSCAFG00020013537	RAB5C	80	35.838	ENSCAFG00020015900	RAB23	73	35.838
ENSCAFG00020013537	RAB5C	86	39.247	ENSCAFG00020009287	RAB14	87	39.247
ENSCAFG00020013537	RAB5C	73	44.304	ENSCAFG00020021797	-	72	44.304
ENSCAFG00020013537	RAB5C	94	41.379	ENSCAFG00020027569	RAB6B	98	41.379
ENSCAFG00020013537	RAB5C	78	42.012	ENSCAFG00020017865	RAB30	83	42.012
ENSCAFG00020013537	RAB5C	85	41.622	ENSCAFG00020003253	RAB18	92	40.933
ENSCAFG00020013537	RAB5C	73	30.675	ENSCAFG00020025277	DNAJC27	60	30.675
ENSCAFG00020013537	RAB5C	73	31.250	ENSCAFG00020011740	RAB34	62	31.250
ENSCAFG00020013537	RAB5C	81	31.638	ENSCAFG00020005505	RHEB	93	31.638
ENSCAFG00020013537	RAB5C	90	48.969	ENSCAFG00020022020	RAB22A	98	48.969
ENSCAFG00020013537	RAB5C	89	41.294	ENSCAFG00020006179	RAB25	93	41.294
ENSCAFG00020013537	RAB5C	77	32.143	ENSCAFG00020007059	HRAS	87	34.667
ENSCAFG00020013537	RAB5C	75	36.585	ENSCAFG00020008673	RAB39B	77	36.585
ENSCAFG00020013537	RAB5C	77	42.442	ENSCAFG00020004847	RAB7A	83	42.442
ENSCAFG00020013537	RAB5C	71	36.601	ENSCAFG00020006938	-	67	36.601
ENSCAFG00020013537	RAB5C	60	41.085	ENSCAFG00020006867	RAB15	55	41.085
ENSCAFG00020013537	RAB5C	89	35.354	ENSCAFG00020002812	RAB9A	97	35.354
ENSCAFG00020013537	RAB5C	89	38.462	ENSCAFG00020018913	RAB35	96	38.462
ENSCAFG00020013537	RAB5C	94	40.291	ENSCAFG00020002206	RAB6A	98	40.291
ENSCAFG00020013537	RAB5C	77	33.333	ENSCAFG00020007046	RERG	84	33.333
ENSCAFG00020013537	RAB5C	80	33.140	ENSCAFG00020003142	-	78	33.140
ENSCAFG00020013537	RAB5C	92	36.893	ENSCAFG00020023721	RAB12	70	34.975
ENSCAFG00020013537	RAB5C	90	42.233	ENSCAFG00020022184	RAB11B	94	42.233
ENSCAFG00020013537	RAB5C	77	32.934	ENSCAFG00020012793	KRAS	95	30.387
ENSCAFG00020013537	RAB5C	89	43.077	ENSCAFG00020026971	RAB1A	95	43.077
ENSCAFG00020013537	RAB5C	75	40.361	ENSCAFG00020001403	RAB33A	70	40.361

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020013537	RAB5C	100	98.611	ENSG00000108774	RAB5C	100	100.000	Homo_sapiens
ENSCAFG00020013537	RAB5C	99	89.302	ENSAPOG00000016864	rab5c	98	91.163	Acanthochromis_polyacanthus
ENSCAFG00020013537	RAB5C	100	99.537	ENSAMEG00000006003	RAB5C	100	99.537	Ailuropoda_melanoleuca
ENSCAFG00020013537	RAB5C	99	88.889	ENSACIG00000010896	rab5c	98	90.278	Amphilophus_citrinellus
ENSCAFG00020013537	RAB5C	99	89.352	ENSAOCG00000016614	rab5c	98	91.204	Amphiprion_ocellaris
ENSCAFG00020013537	RAB5C	97	89.100	ENSAPEG00000017868	-	97	90.995	Amphiprion_percula
ENSCAFG00020013537	RAB5C	100	89.908	ENSATEG00000001937	rab5c	100	90.826	Anabas_testudineus
ENSCAFG00020013537	RAB5C	94	99.020	ENSANAG00000025390	RAB5C	100	99.020	Aotus_nancymaae
ENSCAFG00020013537	RAB5C	96	88.626	ENSACLG00000008615	-	99	88.128	Astatotilapia_calliptera
ENSCAFG00020013537	RAB5C	99	87.963	ENSACLG00000002706	rab5c	98	90.278	Astatotilapia_calliptera
ENSCAFG00020013537	RAB5C	99	89.862	ENSAMXG00000043717	rab5c	99	90.826	Astyanax_mexicanus
ENSCAFG00020013537	RAB5C	96	88.571	ENSAMXG00000037267	-	99	90.476	Astyanax_mexicanus
ENSCAFG00020013537	RAB5C	100	98.611	ENSBTAG00000006982	RAB5C	100	98.611	Bos_taurus
ENSCAFG00020013537	RAB5C	99	75.814	WBGene00004268	rab-5	99	75.814	Caenorhabditis_elegans
ENSCAFG00020013537	RAB5C	100	100.000	ENSCAFG00000015629	RAB5C	100	100.000	Canis_familiaris
ENSCAFG00020013537	RAB5C	100	98.611	ENSCHIG00000012960	RAB5C	100	98.611	Capra_hircus
ENSCAFG00020013537	RAB5C	100	99.074	ENSTSYG00000030531	RAB5C	100	99.074	Carlito_syrichta
ENSCAFG00020013537	RAB5C	100	98.148	ENSCCAG00000025940	RAB5C	100	98.148	Cebus_capucinus
ENSCAFG00020013537	RAB5C	100	98.611	ENSCATG00000040873	RAB5C	100	98.611	Cercocebus_atys
ENSCAFG00020013537	RAB5C	100	97.685	ENSCLAG00000016650	RAB5C	100	97.685	Chinchilla_lanigera
ENSCAFG00020013537	RAB5C	82	99.438	ENSCHOG00000009886	RAB5C	100	99.438	Choloepus_hoffmanni
ENSCAFG00020013537	RAB5C	99	77.103	ENSCING00000003340	-	99	77.103	Ciona_intestinalis
ENSCAFG00020013537	RAB5C	99	75.000	ENSCSAVG00000000613	-	99	83.333	Ciona_savignyi
ENSCAFG00020013537	RAB5C	100	97.685	ENSCGRG00001014226	Rab5c	100	97.685	Cricetulus_griseus_chok1gshd
ENSCAFG00020013537	RAB5C	100	97.685	ENSCGRG00000007534	Rab5c	100	97.685	Cricetulus_griseus_crigri
ENSCAFG00020013537	RAB5C	99	90.741	ENSCSEG00000017024	rab5c	98	90.741	Cynoglossus_semilaevis
ENSCAFG00020013537	RAB5C	99	89.352	ENSCVAG00000009550	rab5c	98	90.741	Cyprinodon_variegatus
ENSCAFG00020013537	RAB5C	100	98.148	ENSDNOG00000038853	RAB5C	100	98.148	Dasypus_novemcinctus
ENSCAFG00020013537	RAB5C	100	98.148	ENSDORG00000006819	Rab5c	100	98.148	Dipodomys_ordii
ENSCAFG00020013537	RAB5C	99	74.648	FBgn0014010	Rab5	95	74.648	Drosophila_melanogaster
ENSCAFG00020013537	RAB5C	99	79.070	ENSEBUG00000014794	rab5c	100	79.070	Eptatretus_burgeri
ENSCAFG00020013537	RAB5C	100	99.074	ENSEASG00005009281	RAB5C	100	99.074	Equus_asinus_asinus
ENSCAFG00020013537	RAB5C	100	99.074	ENSECAG00000025054	RAB5C	100	99.074	Equus_caballus
ENSCAFG00020013537	RAB5C	100	98.611	ENSEEUG00000002790	RAB5C	100	98.611	Erinaceus_europaeus
ENSCAFG00020013537	RAB5C	99	88.889	ENSELUG00000010439	-	98	88.889	Esox_lucius
ENSCAFG00020013537	RAB5C	99	87.963	ENSELUG00000018516	rab5c	99	89.815	Esox_lucius
ENSCAFG00020013537	RAB5C	100	98.611	ENSFCAG00000002148	RAB5C	100	98.611	Felis_catus
ENSCAFG00020013537	RAB5C	100	95.833	ENSFDAG00000021541	RAB5C	100	95.833	Fukomys_damarensis
ENSCAFG00020013537	RAB5C	99	89.352	ENSFHEG00000012117	rab5c	98	90.741	Fundulus_heteroclitus
ENSCAFG00020013537	RAB5C	99	91.244	ENSFHEG00000015268	-	99	91.244	Fundulus_heteroclitus
ENSCAFG00020013537	RAB5C	99	87.963	ENSGMOG00000015096	rab5c	98	90.278	Gadus_morhua
ENSCAFG00020013537	RAB5C	78	88.166	ENSGMOG00000001876	-	98	88.166	Gadus_morhua
ENSCAFG00020013537	RAB5C	96	90.952	ENSGAFG00000003642	-	99	87.783	Gambusia_affinis
ENSCAFG00020013537	RAB5C	99	89.815	ENSGAFG00000000884	rab5c	98	91.204	Gambusia_affinis
ENSCAFG00020013537	RAB5C	87	94.681	ENSGACG00000008659	rab5c	99	86.175	Gasterosteus_aculeatus
ENSCAFG00020013537	RAB5C	100	98.611	ENSGGOG00000005472	RAB5C	100	98.611	Gorilla_gorilla
ENSCAFG00020013537	RAB5C	99	87.963	ENSHBUG00000002014	rab5c	98	90.278	Haplochromis_burtoni
ENSCAFG00020013537	RAB5C	96	88.626	ENSHBUG00000006823	-	99	88.128	Haplochromis_burtoni
ENSCAFG00020013537	RAB5C	100	94.444	ENSHGLG00000012067	RAB5C	100	94.444	Heterocephalus_glaber_female
ENSCAFG00020013537	RAB5C	99	89.862	ENSHCOG00000004662	rab5c	97	90.783	Hippocampus_comes
ENSCAFG00020013537	RAB5C	97	81.604	ENSHCOG00000020238	-	100	80.000	Hippocampus_comes
ENSCAFG00020013537	RAB5C	96	87.619	ENSIPUG00000020082	rab5c	98	88.532	Ictalurus_punctatus
ENSCAFG00020013537	RAB5C	100	97.222	ENSSTOG00000006620	RAB5C	100	97.222	Ictidomys_tridecemlineatus
ENSCAFG00020013537	RAB5C	100	98.611	ENSJJAG00000021181	Rab5c	100	98.611	Jaculus_jaculus
ENSCAFG00020013537	RAB5C	99	88.889	ENSKMAG00000020038	rab5c	98	90.741	Kryptolebias_marmoratus
ENSCAFG00020013537	RAB5C	99	88.479	ENSKMAG00000017417	-	99	88.479	Kryptolebias_marmoratus
ENSCAFG00020013537	RAB5C	99	90.278	ENSLBEG00000004128	rab5c	98	91.667	Labrus_bergylta
ENSCAFG00020013537	RAB5C	100	87.615	ENSLBEG00000010408	-	99	87.615	Labrus_bergylta
ENSCAFG00020013537	RAB5C	99	93.458	ENSLOCG00000012566	rab5c	100	93.458	Lepisosteus_oculatus
ENSCAFG00020013537	RAB5C	100	98.611	ENSMFAG00000039627	RAB5C	100	98.611	Macaca_fascicularis
ENSCAFG00020013537	RAB5C	100	98.611	ENSMNEG00000000355	RAB5C	100	98.611	Macaca_nemestrina
ENSCAFG00020013537	RAB5C	99	88.426	ENSMAMG00000022322	rab5c	98	90.278	Mastacembelus_armatus
ENSCAFG00020013537	RAB5C	99	88.479	ENSMAMG00000016207	-	99	88.479	Mastacembelus_armatus
ENSCAFG00020013537	RAB5C	96	88.626	ENSMZEG00005021090	-	99	88.128	Maylandia_zebra
ENSCAFG00020013537	RAB5C	99	87.963	ENSMZEG00005022735	rab5c	98	90.278	Maylandia_zebra
ENSCAFG00020013537	RAB5C	100	98.611	ENSMAUG00000015005	Rab5c	100	98.611	Mesocricetus_auratus
ENSCAFG00020013537	RAB5C	100	98.611	ENSMICG00000041608	RAB5C	100	98.611	Microcebus_murinus
ENSCAFG00020013537	RAB5C	100	98.611	ENSMOCG00000018531	-	100	98.611	Microtus_ochrogaster
ENSCAFG00020013537	RAB5C	100	89.450	ENSMMOG00000020621	rab5c	99	89.450	Mola_mola
ENSCAFG00020013537	RAB5C	97	84.434	ENSMALG00000006052	rab5c	96	84.259	Monopterus_albus
ENSCAFG00020013537	RAB5C	99	87.156	ENSMALG00000022348	-	99	87.156	Monopterus_albus
ENSCAFG00020013537	RAB5C	100	98.148	MGP_CAROLIEiJ_G0017184	Rab5c	100	98.148	Mus_caroli
ENSCAFG00020013537	RAB5C	100	98.148	ENSMUSG00000019173	Rab5c	100	98.148	Mus_musculus
ENSCAFG00020013537	RAB5C	100	98.148	MGP_PahariEiJ_G0018314	Rab5c	100	98.148	Mus_pahari
ENSCAFG00020013537	RAB5C	100	98.148	MGP_SPRETEiJ_G0018027	Rab5c	100	98.148	Mus_spretus
ENSCAFG00020013537	RAB5C	100	99.537	ENSMPUG00000010554	RAB5C	100	99.537	Mustela_putorius_furo
ENSCAFG00020013537	RAB5C	100	98.611	ENSNGAG00000010286	Rab5c	100	98.611	Nannospalax_galili
ENSCAFG00020013537	RAB5C	96	88.626	ENSNBRG00000016922	-	99	88.128	Neolamprologus_brichardi
ENSCAFG00020013537	RAB5C	99	88.889	ENSNBRG00000018165	rab5c	98	91.204	Neolamprologus_brichardi
ENSCAFG00020013537	RAB5C	82	92.697	ENSOPRG00000008255	RAB5C	100	92.697	Ochotona_princeps
ENSCAFG00020013537	RAB5C	100	96.759	ENSODEG00000017920	RAB5C	100	96.759	Octodon_degus
ENSCAFG00020013537	RAB5C	99	88.889	ENSONIG00000001113	rab5c	98	91.204	Oreochromis_niloticus
ENSCAFG00020013537	RAB5C	100	88.532	ENSORLG00000003882	rab5c	100	89.450	Oryzias_latipes
ENSCAFG00020013537	RAB5C	100	88.991	ENSORLG00020008388	rab5c	100	88.991	Oryzias_latipes_hni
ENSCAFG00020013537	RAB5C	100	88.532	ENSORLG00015021900	rab5c	100	89.450	Oryzias_latipes_hsok
ENSCAFG00020013537	RAB5C	100	88.532	ENSOMEG00000023078	rab5c	100	89.450	Oryzias_melastigma
ENSCAFG00020013537	RAB5C	100	98.611	ENSOGAG00000009456	RAB5C	100	98.611	Otolemur_garnettii
ENSCAFG00020013537	RAB5C	100	98.611	ENSOARG00000018768	RAB5C	100	98.611	Ovis_aries
ENSCAFG00020013537	RAB5C	100	98.611	ENSPPAG00000037206	RAB5C	100	98.611	Pan_paniscus
ENSCAFG00020013537	RAB5C	100	98.611	ENSPPRG00000005745	RAB5C	100	98.611	Panthera_pardus
ENSCAFG00020013537	RAB5C	100	98.611	ENSPTIG00000008177	RAB5C	100	98.611	Panthera_tigris_altaica
ENSCAFG00020013537	RAB5C	100	98.611	ENSPTRG00000009194	RAB5C	100	98.611	Pan_troglodytes
ENSCAFG00020013537	RAB5C	99	87.963	ENSPKIG00000020112	-	99	87.963	Paramormyrops_kingsleyae
ENSCAFG00020013537	RAB5C	99	88.837	ENSPKIG00000001237	-	99	88.837	Paramormyrops_kingsleyae
ENSCAFG00020013537	RAB5C	99	86.111	ENSPMGG00000010792	rab5c	97	89.573	Periophthalmus_magnuspinnatus
ENSCAFG00020013537	RAB5C	100	98.611	ENSPEMG00000017971	Rab5c	100	98.611	Peromyscus_maniculatus_bairdii
ENSCAFG00020013537	RAB5C	99	78.571	ENSPMAG00000000008	rab5c	100	78.571	Petromyzon_marinus
ENSCAFG00020013537	RAB5C	99	80.000	ENSPMAG00000001399	rab5c	100	80.000	Petromyzon_marinus
ENSCAFG00020013537	RAB5C	99	79.070	ENSPMAG00000007867	rab5c	100	79.070	Petromyzon_marinus
ENSCAFG00020013537	RAB5C	100	97.685	ENSPCIG00000020225	-	100	97.685	Phascolarctos_cinereus
ENSCAFG00020013537	RAB5C	99	89.862	ENSPLAG00000016333	-	99	89.862	Poecilia_latipinna
ENSCAFG00020013537	RAB5C	99	89.815	ENSPLAG00000004790	rab5c	98	91.204	Poecilia_latipinna
ENSCAFG00020013537	RAB5C	99	89.815	ENSPMEG00000011336	rab5c	98	91.204	Poecilia_mexicana
ENSCAFG00020013537	RAB5C	98	88.732	ENSPMEG00000012614	-	99	88.182	Poecilia_mexicana
ENSCAFG00020013537	RAB5C	99	89.815	ENSPREG00000010146	rab5c	98	91.204	Poecilia_reticulata
ENSCAFG00020013537	RAB5C	87	92.593	ENSPREG00000022167	-	89	93.989	Poecilia_reticulata
ENSCAFG00020013537	RAB5C	100	98.611	ENSPPYG00000008398	RAB5C	100	98.611	Pongo_abelii
ENSCAFG00020013537	RAB5C	100	97.685	ENSPCAG00000016412	RAB5C	100	97.685	Procavia_capensis
ENSCAFG00020013537	RAB5C	100	97.685	ENSPCOG00000026327	RAB5C	100	97.685	Propithecus_coquereli
ENSCAFG00020013537	RAB5C	100	99.074	ENSPVAG00000003867	RAB5C	100	99.074	Pteropus_vampyrus
ENSCAFG00020013537	RAB5C	96	88.626	ENSPNYG00000015851	-	99	88.128	Pundamilia_nyererei
ENSCAFG00020013537	RAB5C	99	87.963	ENSPNYG00000010615	rab5c	98	90.278	Pundamilia_nyererei
ENSCAFG00020013537	RAB5C	97	86.792	ENSPNAG00000002218	-	99	88.679	Pygocentrus_nattereri
ENSCAFG00020013537	RAB5C	99	90.367	ENSPNAG00000028138	rab5c	99	90.367	Pygocentrus_nattereri
ENSCAFG00020013537	RAB5C	100	98.611	ENSRNOG00000018568	Rab5c	100	98.611	Rattus_norvegicus
ENSCAFG00020013537	RAB5C	100	98.611	ENSRBIG00000031376	RAB5C	100	98.611	Rhinopithecus_bieti
ENSCAFG00020013537	RAB5C	100	98.611	ENSRROG00000032895	RAB5C	100	98.611	Rhinopithecus_roxellana
ENSCAFG00020013537	RAB5C	100	98.148	ENSSBOG00000032552	-	100	98.148	Saimiri_boliviensis_boliviensis
ENSCAFG00020013537	RAB5C	100	98.148	ENSSHAG00000005267	-	100	98.148	Sarcophilus_harrisii
ENSCAFG00020013537	RAB5C	99	87.097	ENSSFOG00015009988	-	99	87.097	Scleropages_formosus
ENSCAFG00020013537	RAB5C	96	91.827	ENSSMAG00000007323	rab5c	98	89.815	Scophthalmus_maximus
ENSCAFG00020013537	RAB5C	99	91.204	ENSSDUG00000023008	rab5c	98	91.204	Seriola_dumerili
ENSCAFG00020013537	RAB5C	99	90.741	ENSSLDG00000017771	rab5c	98	90.741	Seriola_lalandi_dorsalis
ENSCAFG00020013537	RAB5C	100	96.296	ENSSPUG00000012950	-	100	96.296	Sphenodon_punctatus
ENSCAFG00020013537	RAB5C	99	89.815	ENSSPAG00000006436	rab5c	98	92.130	Stegastes_partitus
ENSCAFG00020013537	RAB5C	100	98.611	ENSSSCG00000032467	RAB5C	100	98.611	Sus_scrofa
ENSCAFG00020013537	RAB5C	99	87.963	ENSTRUG00000015590	rab5c	98	89.815	Takifugu_rubripes
ENSCAFG00020013537	RAB5C	96	90.431	ENSTNIG00000011711	rab5c	95	90.431	Tetraodon_nigroviridis
ENSCAFG00020013537	RAB5C	100	98.611	ENSTBEG00000007092	RAB5C	100	98.611	Tupaia_belangeri
ENSCAFG00020013537	RAB5C	100	97.685	ENSTTRG00000006673	RAB5C	100	97.685	Tursiops_truncatus
ENSCAFG00020013537	RAB5C	100	99.537	ENSUAMG00000024343	RAB5C	100	99.537	Ursus_americanus
ENSCAFG00020013537	RAB5C	100	99.537	ENSUMAG00000023270	RAB5C	100	99.537	Ursus_maritimus
ENSCAFG00020013537	RAB5C	99	89.352	ENSXCOG00000016788	rab5c	98	91.204	Xiphophorus_couchianus
ENSCAFG00020013537	RAB5C	96	91.429	ENSXCOG00000006300	-	99	87.838	Xiphophorus_couchianus
ENSCAFG00020013537	RAB5C	99	90.323	ENSXMAG00000022179	-	99	90.323	Xiphophorus_maculatus
ENSCAFG00020013537	RAB5C	99	89.815	ENSXMAG00000003266	rab5c	98	91.204	Xiphophorus_maculatus