EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020013547 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 2255 bases
Position: chrQKWQ01002063.1:10575335-10577589
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020016927	RRM_1	PF00076.22	3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020019635	-	474	-	ENSCAFP00020016927	157 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020013547's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020013547's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020013547	-	54	32.967	ENSCAFG00020020106	-	87	32.967
ENSCAFG00020013547	-	75	66.942	ENSCAFG00020022807	SRSF7	100	65.942
ENSCAFG00020013547	-	57	30.851	ENSCAFG00020008202	-	74	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020013547	-	75	66.942	ENSG00000115875	SRSF7	100	65.942	Homo_sapiens
ENSCAFG00020013547	-	51	55.000	ENSG00000112081	SRSF3	84	55.000	Homo_sapiens
ENSCAFG00020013547	-	75	63.636	ENSACIG00000009890	srsf7b	96	62.698	Amphilophus_citrinellus
ENSCAFG00020013547	-	70	57.522	ENSACIG00000004885	srsf7a	73	57.391	Amphilophus_citrinellus
ENSCAFG00020013547	-	73	53.913	ENSAOCG00000021499	srsf7b	83	53.913	Amphiprion_ocellaris
ENSCAFG00020013547	-	73	53.913	ENSAPEG00000018802	srsf7b	83	53.913	Amphiprion_percula
ENSCAFG00020013547	-	69	68.750	ENSAPLG00000012167	-	55	67.213	Anas_platyrhynchos
ENSCAFG00020013547	-	75	66.116	ENSACAG00000006082	SRSF7	56	64.394	Anolis_carolinensis
ENSCAFG00020013547	-	75	66.942	ENSANAG00000019399	SRSF7	100	65.942	Aotus_nancymaae
ENSCAFG00020013547	-	69	66.964	ENSAMXG00000007005	srsf7b	55	65.812	Astyanax_mexicanus
ENSCAFG00020013547	-	75	66.942	ENSBTAG00000014891	SRSF7	100	65.942	Bos_taurus
ENSCAFG00020013547	-	75	66.942	ENSCJAG00000015185	SRSF7	100	65.942	Callithrix_jacchus
ENSCAFG00020013547	-	75	66.942	ENSCAFG00000029620	SRSF7	55	65.152	Canis_familiaris
ENSCAFG00020013547	-	75	66.942	ENSCHIG00000019180	SRSF7	100	65.942	Capra_hircus
ENSCAFG00020013547	-	75	66.942	ENSTSYG00000012273	SRSF7	100	65.942	Carlito_syrichta
ENSCAFG00020013547	-	75	66.942	ENSCPOG00000033318	SRSF7	100	65.942	Cavia_porcellus
ENSCAFG00020013547	-	75	66.942	ENSCATG00000031728	SRSF7	100	65.942	Cercocebus_atys
ENSCAFG00020013547	-	51	55.000	ENSCATG00000031850	SRSF3	84	55.000	Cercocebus_atys
ENSCAFG00020013547	-	75	66.942	ENSCLAG00000005235	SRSF7	100	65.942	Chinchilla_lanigera
ENSCAFG00020013547	-	75	66.942	ENSCSAG00000012296	SRSF7	55	65.152	Chlorocebus_sabaeus
ENSCAFG00020013547	-	75	59.504	ENSCHOG00000002390	-	53	58.333	Choloepus_hoffmanni
ENSCAFG00020013547	-	75	66.116	ENSCPBG00000018247	-	100	65.217	Chrysemys_picta_bellii
ENSCAFG00020013547	-	75	65.289	ENSCPBG00000018252	-	100	64.493	Chrysemys_picta_bellii
ENSCAFG00020013547	-	50	58.228	ENSCING00000011663	-	56	56.627	Ciona_intestinalis
ENSCAFG00020013547	-	73	44.275	ENSCING00000023459	-	59	44.444	Ciona_intestinalis
ENSCAFG00020013547	-	68	45.614	ENSCSAVG00000007369	-	65	45.217	Ciona_savignyi
ENSCAFG00020013547	-	73	41.860	ENSCSAVG00000010868	-	60	43.609	Ciona_savignyi
ENSCAFG00020013547	-	75	66.942	ENSCANG00000040757	SRSF7	100	65.942	Colobus_angolensis_palliatus
ENSCAFG00020013547	-	75	66.942	ENSCGRG00001018245	Srsf7	55	65.152	Cricetulus_griseus_chok1gshd
ENSCAFG00020013547	-	73	69.231	ENSCGRG00000005929	Srsf7	98	67.910	Cricetulus_griseus_crigri
ENSCAFG00020013547	-	78	55.906	ENSCSEG00000006378	srsf7a	89	55.906	Cynoglossus_semilaevis
ENSCAFG00020013547	-	54	60.714	ENSDARG00000100815	srsf3a	79	42.857	Danio_rerio
ENSCAFG00020013547	-	69	57.658	ENSDARG00000035325	srsf7a	81	67.797	Danio_rerio
ENSCAFG00020013547	-	75	61.157	ENSDARG00000101057	srsf7b	86	59.091	Danio_rerio
ENSCAFG00020013547	-	54	60.714	ENSDARG00000025397	srsf3a	79	42.857	Danio_rerio
ENSCAFG00020013547	-	75	66.942	ENSDNOG00000007821	SRSF7	100	65.942	Dasypus_novemcinctus
ENSCAFG00020013547	-	75	66.942	ENSDORG00000008616	Srsf7	55	65.152	Dipodomys_ordii
ENSCAFG00020013547	-	68	59.091	ENSEBUG00000004912	srsf7a	51	55.833	Eptatretus_burgeri
ENSCAFG00020013547	-	54	52.381	ENSEBUG00000002677	-	55	52.381	Eptatretus_burgeri
ENSCAFG00020013547	-	75	66.942	ENSEASG00005005547	SRSF7	100	65.942	Equus_asinus_asinus
ENSCAFG00020013547	-	75	66.942	ENSECAG00000008664	SRSF7	55	65.152	Equus_caballus
ENSCAFG00020013547	-	75	66.942	ENSEEUG00000014487	SRSF7	54	65.891	Erinaceus_europaeus
ENSCAFG00020013547	-	80	63.077	ENSELUG00000018155	srsf7b	91	62.205	Esox_lucius
ENSCAFG00020013547	-	73	58.475	ENSELUG00000016922	srsf7a	83	58.475	Esox_lucius
ENSCAFG00020013547	-	75	66.942	ENSFCAG00000031143	SRSF7	60	65.152	Felis_catus
ENSCAFG00020013547	-	69	56.881	ENSFCAG00000028644	-	82	55.833	Felis_catus
ENSCAFG00020013547	-	69	68.750	ENSFALG00000002364	-	52	67.213	Ficedula_albicollis
ENSCAFG00020013547	-	73	68.376	ENSFALG00000002358	-	51	66.406	Ficedula_albicollis
ENSCAFG00020013547	-	69	66.667	ENSFDAG00000017258	-	52	66.116	Fukomys_damarensis
ENSCAFG00020013547	-	75	66.942	ENSFDAG00000016030	-	100	65.942	Fukomys_damarensis
ENSCAFG00020013547	-	90	51.034	ENSFHEG00000007159	srsf7a	77	51.034	Fundulus_heteroclitus
ENSCAFG00020013547	-	76	59.016	ENSFHEG00000023046	srsf7b	64	56.849	Fundulus_heteroclitus
ENSCAFG00020013547	-	71	59.649	ENSGMOG00000002004	srsf7a	50	58.824	Gadus_morhua
ENSCAFG00020013547	-	75	65.289	ENSGALG00000038528	-	52	63.636	Gallus_gallus
ENSCAFG00020013547	-	69	68.750	ENSGALG00000033120	SRSF7	95	67.442	Gallus_gallus
ENSCAFG00020013547	-	69	59.459	ENSGAFG00000002177	srsf7a	50	58.400	Gambusia_affinis
ENSCAFG00020013547	-	82	58.462	ENSGAFG00000008856	srsf7b	91	62.500	Gambusia_affinis
ENSCAFG00020013547	-	75	66.942	ENSGAGG00000016294	-	100	65.942	Gopherus_agassizii
ENSCAFG00020013547	-	75	65.289	ENSGAGG00000003553	SRSF7	100	64.493	Gopherus_agassizii
ENSCAFG00020013547	-	75	66.942	ENSGGOG00000014620	SRSF7	100	65.942	Gorilla_gorilla
ENSCAFG00020013547	-	75	66.942	ENSHGLG00000013954	-	55	65.152	Heterocephalus_glaber_female
ENSCAFG00020013547	-	75	51.587	ENSHGLG00000005295	-	95	50.370	Heterocephalus_glaber_female
ENSCAFG00020013547	-	75	66.942	ENSHGLG00100006124	-	100	65.942	Heterocephalus_glaber_male
ENSCAFG00020013547	-	75	51.587	ENSHGLG00100014570	-	95	50.370	Heterocephalus_glaber_male
ENSCAFG00020013547	-	71	58.772	ENSHCOG00000016135	srsf7a	50	56.800	Hippocampus_comes
ENSCAFG00020013547	-	75	62.810	ENSIPUG00000011708	srsf7	74	61.832	Ictalurus_punctatus
ENSCAFG00020013547	-	75	66.942	ENSSTOG00000004389	SRSF7	100	65.942	Ictidomys_tridecemlineatus
ENSCAFG00020013547	-	54	52.381	ENSSTOG00000032014	-	56	52.381	Ictidomys_tridecemlineatus
ENSCAFG00020013547	-	83	54.135	ENSJJAG00000020230	-	82	54.135	Jaculus_jaculus
ENSCAFG00020013547	-	75	66.942	ENSJJAG00000023079	Srsf7	55	65.152	Jaculus_jaculus
ENSCAFG00020013547	-	75	68.333	ENSLACG00000004052	SRSF7	54	66.412	Latimeria_chalumnae
ENSCAFG00020013547	-	68	61.818	ENSLACG00000018688	srsf7a	58	60.331	Latimeria_chalumnae
ENSCAFG00020013547	-	69	57.658	ENSLOCG00000014314	-	65	55.372	Lepisosteus_oculatus
ENSCAFG00020013547	-	75	65.833	ENSLOCG00000015778	srsf7b	55	64.394	Lepisosteus_oculatus
ENSCAFG00020013547	-	73	70.339	ENSLAFG00000005666	SRSF7	81	66.154	Loxodonta_africana
ENSCAFG00020013547	-	51	55.000	ENSMFAG00000002707	SRSF3	84	55.000	Macaca_fascicularis
ENSCAFG00020013547	-	75	66.942	ENSMFAG00000001980	SRSF7	100	65.942	Macaca_fascicularis
ENSCAFG00020013547	-	75	66.667	ENSMMUG00000011025	SRSF7	86	53.333	Macaca_mulatta
ENSCAFG00020013547	-	51	55.000	ENSMMUG00000014306	SRSF3	84	55.000	Macaca_mulatta
ENSCAFG00020013547	-	51	55.000	ENSMNEG00000038420	SRSF3	84	55.000	Macaca_nemestrina
ENSCAFG00020013547	-	75	66.667	ENSMNEG00000036669	SRSF7	86	53.333	Macaca_nemestrina
ENSCAFG00020013547	-	75	66.942	ENSMLEG00000038852	SRSF7	100	65.942	Mandrillus_leucophaeus
ENSCAFG00020013547	-	75	62.810	ENSMAMG00000017138	srsf7b	58	60.294	Mastacembelus_armatus
ENSCAFG00020013547	-	69	69.643	ENSMGAG00000007415	SRSF7	56	68.033	Meleagris_gallopavo
ENSCAFG00020013547	-	67	59.259	ENSMAUG00000021932	-	61	56.452	Mesocricetus_auratus
ENSCAFG00020013547	-	75	66.942	ENSMAUG00000017430	Srsf7	55	65.152	Mesocricetus_auratus
ENSCAFG00020013547	-	75	67.500	ENSMICG00000005046	SRSF7	86	53.333	Microcebus_murinus
ENSCAFG00020013547	-	79	68.504	ENSMOCG00000022763	-	56	68.182	Microtus_ochrogaster
ENSCAFG00020013547	-	70	57.522	ENSMMOG00000005208	srsf7a	83	55.039	Mola_mola
ENSCAFG00020013547	-	69	69.369	ENSMODG00000023693	-	51	68.033	Monodelphis_domestica
ENSCAFG00020013547	-	75	66.116	ENSMODG00000008669	-	56	64.394	Monodelphis_domestica
ENSCAFG00020013547	-	75	66.942	MGP_CAROLIEiJ_G0021902	Srsf7	55	65.152	Mus_caroli
ENSCAFG00020013547	-	75	66.942	ENSMUSG00000024097	Srsf7	100	65.942	Mus_musculus
ENSCAFG00020013547	-	75	66.942	MGP_PahariEiJ_G0020891	Srsf7	55	65.152	Mus_pahari
ENSCAFG00020013547	-	75	66.942	MGP_SPRETEiJ_G0022817	Srsf7	55	65.152	Mus_spretus
ENSCAFG00020013547	-	75	66.116	ENSMLUG00000009536	SRSF7	55	64.394	Myotis_lucifugus
ENSCAFG00020013547	-	75	63.636	ENSMLUG00000015692	-	58	62.121	Myotis_lucifugus
ENSCAFG00020013547	-	75	66.942	ENSNGAG00000014431	Srsf7	55	65.152	Nannospalax_galili
ENSCAFG00020013547	-	71	56.522	ENSNBRG00000006601	srsf7a	73	56.522	Neolamprologus_brichardi
ENSCAFG00020013547	-	75	66.942	ENSNLEG00000016349	SRSF7	100	65.942	Nomascus_leucogenys
ENSCAFG00020013547	-	51	55.000	ENSNLEG00000010737	SRSF3	84	55.000	Nomascus_leucogenys
ENSCAFG00020013547	-	75	66.116	ENSMEUG00000016459	-	55	64.394	Notamacropus_eugenii
ENSCAFG00020013547	-	68	70.000	ENSMEUG00000000773	-	63	68.033	Notamacropus_eugenii
ENSCAFG00020013547	-	75	66.942	ENSOPRG00000010234	SRSF7	57	65.152	Ochotona_princeps
ENSCAFG00020013547	-	65	61.905	ENSODEG00000008570	-	64	56.693	Octodon_degus
ENSCAFG00020013547	-	75	66.942	ENSODEG00000010029	-	55	65.152	Octodon_degus
ENSCAFG00020013547	-	71	69.298	ENSOANG00000004405	SRSF7	52	67.460	Ornithorhynchus_anatinus
ENSCAFG00020013547	-	75	66.942	ENSOCUG00000004087	SRSF7	55	65.152	Oryctolagus_cuniculus
ENSCAFG00020013547	-	75	66.942	ENSOGAG00000010169	SRSF7	54	65.152	Otolemur_garnettii
ENSCAFG00020013547	-	79	66.142	ENSOARG00000008771	SRSF7	52	66.142	Ovis_aries
ENSCAFG00020013547	-	75	66.667	ENSPPAG00000017907	SRSF7	86	53.333	Pan_paniscus
ENSCAFG00020013547	-	51	55.000	ENSPPAG00000037453	SRSF3	84	55.000	Pan_paniscus
ENSCAFG00020013547	-	75	66.942	ENSPPRG00000003682	SRSF7	60	65.152	Panthera_pardus
ENSCAFG00020013547	-	75	66.942	ENSPTIG00000006350	SRSF7	60	65.152	Panthera_tigris_altaica
ENSCAFG00020013547	-	51	55.000	ENSPTRG00000018106	SRSF3	84	55.000	Pan_troglodytes
ENSCAFG00020013547	-	75	66.667	ENSPTRG00000011851	SRSF7	86	53.333	Pan_troglodytes
ENSCAFG00020013547	-	51	55.000	ENSPANG00000018768	-	84	55.000	Papio_anubis
ENSCAFG00020013547	-	75	66.667	ENSPANG00000018079	SRSF7	86	53.333	Papio_anubis
ENSCAFG00020013547	-	75	62.810	ENSPKIG00000022669	SRSF7	98	58.904	Paramormyrops_kingsleyae
ENSCAFG00020013547	-	75	63.636	ENSPKIG00000017425	srsf7b	77	62.044	Paramormyrops_kingsleyae
ENSCAFG00020013547	-	75	66.667	ENSPSIG00000004397	-	52	65.152	Pelodiscus_sinensis
ENSCAFG00020013547	-	69	70.536	ENSPSIG00000004636	-	53	68.852	Pelodiscus_sinensis
ENSCAFG00020013547	-	78	53.600	ENSPMGG00000021890	srsf7a	92	52.713	Periophthalmus_magnuspinnatus
ENSCAFG00020013547	-	75	66.942	ENSPEMG00000015449	Srsf7	55	65.152	Peromyscus_maniculatus_bairdii
ENSCAFG00020013547	-	70	52.212	ENSPMAG00000004472	srsf7a	60	51.261	Petromyzon_marinus
ENSCAFG00020013547	-	69	69.643	ENSPCIG00000020726	-	89	67.213	Phascolarctos_cinereus
ENSCAFG00020013547	-	75	66.116	ENSPCIG00000020694	-	100	65.217	Phascolarctos_cinereus
ENSCAFG00020013547	-	76	59.016	ENSPFOG00000008820	srsf7b	55	61.111	Poecilia_formosa
ENSCAFG00020013547	-	76	59.016	ENSPLAG00000023806	srsf7b	55	61.111	Poecilia_latipinna
ENSCAFG00020013547	-	69	59.459	ENSPLAG00000004839	srsf7a	50	58.400	Poecilia_latipinna
ENSCAFG00020013547	-	69	58.559	ENSPMEG00000002757	srsf7a	50	57.600	Poecilia_mexicana
ENSCAFG00020013547	-	76	59.016	ENSPREG00000006149	srsf7b	57	61.111	Poecilia_reticulata
ENSCAFG00020013547	-	75	59.167	ENSPREG00000020685	srsf7a	91	59.167	Poecilia_reticulata
ENSCAFG00020013547	-	75	66.667	ENSPPYG00000012480	SRSF7	55	65.152	Pongo_abelii
ENSCAFG00020013547	-	75	66.942	ENSPCAG00000011348	SRSF7	57	65.152	Procavia_capensis
ENSCAFG00020013547	-	75	50.413	ENSPCOG00000025051	-	52	50.000	Propithecus_coquereli
ENSCAFG00020013547	-	76	58.537	ENSPCOG00000023721	-	88	56.835	Propithecus_coquereli
ENSCAFG00020013547	-	69	71.171	ENSPCOG00000019422	-	55	70.833	Propithecus_coquereli
ENSCAFG00020013547	-	75	67.500	ENSPVAG00000012076	SRSF7	57	65.649	Pteropus_vampyrus
ENSCAFG00020013547	-	69	67.857	ENSPNAG00000012546	srsf7b	50	66.393	Pygocentrus_nattereri
ENSCAFG00020013547	-	75	66.942	ENSRNOG00000027360	Srsf7	55	65.152	Rattus_norvegicus
ENSCAFG00020013547	-	71	65.789	ENSRNOG00000008398	AABR07055789.1	72	66.116	Rattus_norvegicus
ENSCAFG00020013547	-	72	69.828	ENSRBIG00000024695	SRSF7	86	53.333	Rhinopithecus_bieti
ENSCAFG00020013547	-	75	66.942	ENSRROG00000005080	SRSF7	100	65.942	Rhinopithecus_roxellana
ENSCAFG00020013547	-	75	66.942	ENSSBOG00000025074	SRSF7	100	65.942	Saimiri_boliviensis_boliviensis
ENSCAFG00020013547	-	69	69.369	ENSSHAG00000004597	-	51	68.033	Sarcophilus_harrisii
ENSCAFG00020013547	-	69	71.429	ENSSHAG00000015970	-	92	68.992	Sarcophilus_harrisii
ENSCAFG00020013547	-	75	63.636	ENSSFOG00015021911	srsf7b	52	62.121	Scleropages_formosus
ENSCAFG00020013547	-	75	63.636	ENSSFOG00015007348	SRSF7	55	62.121	Scleropages_formosus
ENSCAFG00020013547	-	69	56.250	ENSSFOG00015006796	-	50	55.200	Scleropages_formosus
ENSCAFG00020013547	-	79	62.205	ENSSDUG00000021338	srsf7b	88	62.205	Seriola_dumerili
ENSCAFG00020013547	-	83	57.895	ENSSLDG00000021463	srsf7b	75	57.895	Seriola_lalandi_dorsalis
ENSCAFG00020013547	-	76	62.602	ENSSPAG00000017204	srsf7b	89	61.905	Stegastes_partitus
ENSCAFG00020013547	-	77	55.645	ENSSPAG00000022192	srsf7a	93	57.500	Stegastes_partitus
ENSCAFG00020013547	-	75	66.942	ENSSSCG00000008484	SRSF7	100	65.942	Sus_scrofa
ENSCAFG00020013547	-	75	64.463	ENSTGUG00000002095	SRSF7	52	62.879	Taeniopygia_guttata
ENSCAFG00020013547	-	75	65.289	ENSTGUG00000002080	-	55	63.636	Taeniopygia_guttata
ENSCAFG00020013547	-	69	72.072	ENSTBEG00000004604	SRSF7	52	70.588	Tupaia_belangeri
ENSCAFG00020013547	-	69	66.667	ENSTTRG00000014324	SRSF7	55	64.754	Tursiops_truncatus
ENSCAFG00020013547	-	75	66.942	ENSUAMG00000025051	-	100	65.942	Ursus_americanus
ENSCAFG00020013547	-	75	67.769	ENSUMAG00000013534	SRSF7	55	65.152	Ursus_maritimus
ENSCAFG00020013547	-	84	88.462	ENSUMAG00000023107	-	65	88.889	Ursus_maritimus
ENSCAFG00020013547	-	69	72.072	ENSVPAG00000003316	SRSF7	52	70.588	Vicugna_pacos
ENSCAFG00020013547	-	75	66.942	ENSVVUG00000018767	-	100	65.942	Vulpes_vulpes
ENSCAFG00020013547	-	75	88.983	ENSVVUG00000006092	-	69	91.667	Vulpes_vulpes
ENSCAFG00020013547	-	75	64.463	ENSXETG00000025300	srsf7	56	62.879	Xenopus_tropicalis
ENSCAFG00020013547	-	75	58.333	ENSXCOG00000009381	srsf7a	91	58.333	Xiphophorus_couchianus
ENSCAFG00020013547	-	78	57.600	ENSXCOG00000010843	srsf7b	93	58.273	Xiphophorus_couchianus
ENSCAFG00020013547	-	69	58.559	ENSXMAG00000003050	srsf7a	50	57.600	Xiphophorus_maculatus