EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020013754 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 5442 bases
Position: chrQKWQ01001090.1:48306268-48311709
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020017174	RRM_1	PF00076.22	2.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020019936	-	357	-	ENSCAFP00020017174	118 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020013754's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020013754's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020013754	-	69	64.103	ENSCAFG00020003361	-	58	64.103
ENSCAFG00020013754	-	58	51.471	ENSCAFG00020017577	-	60	51.471
ENSCAFG00020013754	-	64	63.158	ENSCAFG00020006299	-	55	61.446
ENSCAFG00020013754	-	84	55.556	ENSCAFG00020018495	-	52	55.556
ENSCAFG00020013754	-	82	70.408	ENSCAFG00020011757	-	96	70.408

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020013754	-	69	66.667	ENSG00000135486	HNRNPA1	64	67.532	Homo_sapiens
ENSCAFG00020013754	-	84	44.762	ENSAMEG00000000439	-	55	44.762	Ailuropoda_melanoleuca
ENSCAFG00020013754	-	69	58.228	ENSAMEG00000004289	-	52	58.228	Ailuropoda_melanoleuca
ENSCAFG00020013754	-	66	60.256	ENSAMEG00000006838	-	62	60.256	Ailuropoda_melanoleuca
ENSCAFG00020013754	-	69	89.286	ENSAMEG00000005593	-	57	89.286	Ailuropoda_melanoleuca
ENSCAFG00020013754	-	69	64.103	ENSACIG00000012946	hnrnpa1b	50	64.103	Amphilophus_citrinellus
ENSCAFG00020013754	-	74	58.333	ENSACIG00000020389	HNRNPA1P48	60	66.667	Amphilophus_citrinellus
ENSCAFG00020013754	-	84	52.525	ENSANAG00000025460	-	54	52.525	Aotus_nancymaae
ENSCAFG00020013754	-	69	67.143	ENSANAG00000033687	-	50	67.143	Aotus_nancymaae
ENSCAFG00020013754	-	69	66.667	ENSANAG00000023645	-	56	66.667	Aotus_nancymaae
ENSCAFG00020013754	-	69	53.846	ENSANAG00000035982	-	50	53.846	Aotus_nancymaae
ENSCAFG00020013754	-	69	65.385	ENSANAG00000033447	-	50	65.385	Aotus_nancymaae
ENSCAFG00020013754	-	62	47.945	ENSAMXG00000024951	-	50	47.945	Astyanax_mexicanus
ENSCAFG00020013754	-	66	66.667	ENSBTAG00000052568	-	58	66.667	Bos_taurus
ENSCAFG00020013754	-	69	66.667	ENSCJAG00000018864	-	56	66.667	Callithrix_jacchus
ENSCAFG00020013754	-	62	44.615	ENSCAFG00000006110	-	55	44.615	Canis_familiaris
ENSCAFG00020013754	-	72	50.000	ENSCAFG00000005307	-	63	50.000	Canis_familiaris
ENSCAFG00020013754	-	67	63.158	ENSCHIG00000015099	-	65	63.158	Capra_hircus
ENSCAFG00020013754	-	62	53.448	ENSTSYG00000030815	-	52	53.448	Carlito_syrichta
ENSCAFG00020013754	-	69	66.667	ENSTSYG00000012949	-	50	66.667	Carlito_syrichta
ENSCAFG00020013754	-	74	60.714	ENSCCAG00000019706	-	55	62.821	Cebus_capucinus
ENSCAFG00020013754	-	69	66.667	ENSCATG00000043560	-	56	66.667	Cercocebus_atys
ENSCAFG00020013754	-	66	52.564	ENSCATG00000021833	-	51	52.564	Cercocebus_atys
ENSCAFG00020013754	-	69	52.564	ENSCATG00000040418	-	51	52.564	Cercocebus_atys
ENSCAFG00020013754	-	71	52.000	ENSCLAG00000007977	-	56	53.425	Chinchilla_lanigera
ENSCAFG00020013754	-	69	65.385	ENSCPBG00000022326	-	50	65.385	Chrysemys_picta_bellii
ENSCAFG00020013754	-	69	61.538	ENSCANG00000040983	-	50	61.538	Colobus_angolensis_palliatus
ENSCAFG00020013754	-	69	66.667	ENSCANG00000041992	HNRNPA1	56	66.667	Colobus_angolensis_palliatus
ENSCAFG00020013754	-	69	65.823	ENSCANG00000028832	-	55	66.667	Colobus_angolensis_palliatus
ENSCAFG00020013754	-	86	48.000	ENSDNOG00000035292	-	55	48.000	Dasypus_novemcinctus
ENSCAFG00020013754	-	69	64.103	ENSDNOG00000040960	-	50	64.103	Dasypus_novemcinctus
ENSCAFG00020013754	-	58	49.275	ENSDNOG00000036647	-	75	49.275	Dasypus_novemcinctus
ENSCAFG00020013754	-	64	57.333	ENSDNOG00000010301	-	60	57.333	Dasypus_novemcinctus
ENSCAFG00020013754	-	69	58.333	ENSDNOG00000037882	-	50	58.333	Dasypus_novemcinctus
ENSCAFG00020013754	-	69	64.103	ENSDNOG00000034908	-	54	64.103	Dasypus_novemcinctus
ENSCAFG00020013754	-	89	46.154	ENSDNOG00000033368	-	65	46.154	Dasypus_novemcinctus
ENSCAFG00020013754	-	65	57.143	ENSETEG00000018059	-	54	57.143	Echinops_telfairi
ENSCAFG00020013754	-	69	65.333	ENSETEG00000015332	-	55	65.333	Echinops_telfairi
ENSCAFG00020013754	-	57	61.765	ENSETEG00000012394	-	52	61.765	Echinops_telfairi
ENSCAFG00020013754	-	83	46.154	ENSETEG00000015984	-	65	46.154	Echinops_telfairi
ENSCAFG00020013754	-	69	60.000	ENSETEG00000001872	-	56	60.000	Echinops_telfairi
ENSCAFG00020013754	-	66	46.154	ENSETEG00000012879	-	50	46.154	Echinops_telfairi
ENSCAFG00020013754	-	84	49.296	ENSETEG00000017761	-	64	49.296	Echinops_telfairi
ENSCAFG00020013754	-	81	45.455	ENSETEG00000019833	-	61	45.918	Echinops_telfairi
ENSCAFG00020013754	-	60	45.070	ENSEBUG00000008843	hnrnpa1b	53	45.070	Eptatretus_burgeri
ENSCAFG00020013754	-	69	66.667	ENSEASG00005023455	-	73	65.854	Equus_asinus_asinus
ENSCAFG00020013754	-	69	66.667	ENSECAG00000028129	-	50	66.667	Equus_caballus
ENSCAFG00020013754	-	66	60.256	ENSEEUG00000009941	-	55	60.256	Erinaceus_europaeus
ENSCAFG00020013754	-	69	64.103	ENSEEUG00000000494	-	56	64.103	Erinaceus_europaeus
ENSCAFG00020013754	-	69	66.667	ENSEEUG00000006130	-	56	66.667	Erinaceus_europaeus
ENSCAFG00020013754	-	69	64.103	ENSFCAG00000035826	-	72	64.103	Felis_catus
ENSCAFG00020013754	-	69	62.821	ENSFCAG00000012001	-	70	62.821	Felis_catus
ENSCAFG00020013754	-	69	64.103	ENSFCAG00000042512	-	71	64.103	Felis_catus
ENSCAFG00020013754	-	69	60.256	ENSFCAG00000028796	-	71	60.256	Felis_catus
ENSCAFG00020013754	-	69	66.667	ENSFCAG00000010150	HNRNPA1	56	66.667	Felis_catus
ENSCAFG00020013754	-	69	56.410	ENSGGOG00000010478	-	50	56.410	Gorilla_gorilla
ENSCAFG00020013754	-	84	48.485	ENSHGLG00100006275	-	54	48.485	Heterocephalus_glaber_male
ENSCAFG00020013754	-	83	48.571	ENSHGLG00100003583	-	56	48.571	Heterocephalus_glaber_male
ENSCAFG00020013754	-	66	61.538	ENSIPUG00000022432	hnrnpa1b	50	61.538	Ictalurus_punctatus
ENSCAFG00020013754	-	69	64.000	ENSSTOG00000031228	-	52	64.000	Ictidomys_tridecemlineatus
ENSCAFG00020013754	-	78	52.128	ENSJJAG00000002566	-	51	52.128	Jaculus_jaculus
ENSCAFG00020013754	-	66	65.385	ENSLAFG00000030769	-	65	65.385	Loxodonta_africana
ENSCAFG00020013754	-	69	66.667	ENSLAFG00000026657	-	54	66.667	Loxodonta_africana
ENSCAFG00020013754	-	69	75.862	ENSLAFG00000029171	-	54	60.256	Loxodonta_africana
ENSCAFG00020013754	-	69	66.667	ENSMFAG00000031561	HNRNPA1	56	66.667	Macaca_fascicularis
ENSCAFG00020013754	-	73	61.446	ENSMFAG00000043804	-	56	64.103	Macaca_fascicularis
ENSCAFG00020013754	-	69	65.385	ENSMMUG00000029402	-	76	65.385	Macaca_mulatta
ENSCAFG00020013754	-	69	66.667	ENSMMUG00000047451	-	72	66.667	Macaca_mulatta
ENSCAFG00020013754	-	69	66.667	ENSMMUG00000012989	HNRNPA1	56	66.667	Macaca_mulatta
ENSCAFG00020013754	-	69	66.667	ENSMNEG00000042992	HNRNPA1	56	66.667	Macaca_nemestrina
ENSCAFG00020013754	-	92	50.980	ENSMLEG00000030800	-	52	50.980	Mandrillus_leucophaeus
ENSCAFG00020013754	-	69	66.667	ENSMLEG00000044414	-	56	66.667	Mandrillus_leucophaeus
ENSCAFG00020013754	-	67	67.089	ENSMGAG00000007630	-	78	67.089	Meleagris_gallopavo
ENSCAFG00020013754	-	69	66.667	ENSMICG00000032477	HNRNPA1	56	66.667	Microcebus_murinus
ENSCAFG00020013754	-	66	57.692	ENSMODG00000023422	-	61	57.692	Monodelphis_domestica
ENSCAFG00020013754	-	62	60.000	ENSMODG00000002376	-	56	60.000	Monodelphis_domestica
ENSCAFG00020013754	-	69	66.667	ENSMUSG00000046434	Hnrnpa1	56	66.667	Mus_musculus
ENSCAFG00020013754	-	69	47.945	MGP_PahariEiJ_G0020372	-	52	47.945	Mus_pahari
ENSCAFG00020013754	-	71	66.667	ENSMPUG00000002619	-	52	66.667	Mustela_putorius_furo
ENSCAFG00020013754	-	69	65.385	ENSMPUG00000008058	-	54	65.385	Mustela_putorius_furo
ENSCAFG00020013754	-	69	64.103	ENSMPUG00000014372	-	53	64.103	Mustela_putorius_furo
ENSCAFG00020013754	-	59	68.571	ENSMPUG00000012635	-	68	52.336	Mustela_putorius_furo
ENSCAFG00020013754	-	69	51.389	ENSMPUG00000010510	-	61	51.389	Mustela_putorius_furo
ENSCAFG00020013754	-	59	56.923	ENSMPUG00000010086	-	53	56.923	Mustela_putorius_furo
ENSCAFG00020013754	-	69	65.385	ENSMPUG00000005940	-	63	65.385	Mustela_putorius_furo
ENSCAFG00020013754	-	71	69.565	ENSMPUG00000002828	-	55	69.565	Mustela_putorius_furo
ENSCAFG00020013754	-	66	61.538	ENSMLUG00000000788	-	51	61.538	Myotis_lucifugus
ENSCAFG00020013754	-	62	63.768	ENSMLUG00000027180	-	53	63.768	Myotis_lucifugus
ENSCAFG00020013754	-	62	63.768	ENSMLUG00000030316	-	58	63.768	Myotis_lucifugus
ENSCAFG00020013754	-	76	56.322	ENSNBRG00000011082	HNRNPA1P48	60	66.667	Neolamprologus_brichardi
ENSCAFG00020013754	-	69	66.667	ENSNLEG00000017659	HNRNPA1	56	66.667	Nomascus_leucogenys
ENSCAFG00020013754	-	69	64.103	ENSODEG00000005110	-	50	64.103	Octodon_degus
ENSCAFG00020013754	-	66	66.667	ENSOANG00000013708	-	52	66.667	Ornithorhynchus_anatinus
ENSCAFG00020013754	-	69	64.103	ENSOCUG00000022627	-	51	64.103	Oryctolagus_cuniculus
ENSCAFG00020013754	-	69	66.667	ENSOCUG00000022568	-	61	66.667	Oryctolagus_cuniculus
ENSCAFG00020013754	-	69	64.103	ENSOCUG00000021007	-	65	64.103	Oryctolagus_cuniculus
ENSCAFG00020013754	-	66	46.667	ENSOCUG00000023949	-	50	46.667	Oryctolagus_cuniculus
ENSCAFG00020013754	-	69	66.667	ENSOCUG00000023674	-	65	66.667	Oryctolagus_cuniculus
ENSCAFG00020013754	-	69	66.667	ENSOCUG00000023322	-	53	66.667	Oryctolagus_cuniculus
ENSCAFG00020013754	-	81	50.000	ENSOCUG00000014210	-	55	50.000	Oryctolagus_cuniculus
ENSCAFG00020013754	-	69	66.667	ENSOCUG00000021006	-	61	66.667	Oryctolagus_cuniculus
ENSCAFG00020013754	-	64	45.161	ENSORLG00000026571	-	70	45.161	Oryzias_latipes
ENSCAFG00020013754	-	59	55.319	ENSORLG00015015204	-	52	55.319	Oryzias_latipes_hsok
ENSCAFG00020013754	-	58	46.377	ENSOMEG00000011670	-	79	46.377	Oryzias_melastigma
ENSCAFG00020013754	-	66	55.128	ENSOGAG00000031644	-	50	55.128	Otolemur_garnettii
ENSCAFG00020013754	-	69	61.538	ENSOARG00000003049	-	59	61.538	Ovis_aries
ENSCAFG00020013754	-	69	71.667	ENSOARG00000013612	-	62	71.667	Ovis_aries
ENSCAFG00020013754	-	69	66.667	ENSPPAG00000018027	HNRNPA1	56	66.667	Pan_paniscus
ENSCAFG00020013754	-	69	66.667	ENSPPAG00000040581	-	58	66.667	Pan_paniscus
ENSCAFG00020013754	-	66	64.103	ENSPPRG00000008329	-	57	64.103	Panthera_pardus
ENSCAFG00020013754	-	69	66.667	ENSPPRG00000012587	HNRNPA1	56	66.667	Panthera_pardus
ENSCAFG00020013754	-	69	60.256	ENSPTIG00000019051	-	65	60.256	Panthera_tigris_altaica
ENSCAFG00020013754	-	69	66.667	ENSPTIG00000016796	-	54	66.667	Panthera_tigris_altaica
ENSCAFG00020013754	-	69	66.667	ENSPTIG00000015170	HNRNPA1	56	66.667	Panthera_tigris_altaica
ENSCAFG00020013754	-	69	66.667	ENSPTRG00000049417	HNRNPA1	56	66.667	Pan_troglodytes
ENSCAFG00020013754	-	69	57.692	ENSPANG00000011253	-	50	57.692	Papio_anubis
ENSCAFG00020013754	-	69	66.667	ENSPANG00000010434	-	56	66.667	Papio_anubis
ENSCAFG00020013754	-	84	44.762	ENSPANG00000021716	-	59	44.762	Papio_anubis
ENSCAFG00020013754	-	69	64.103	ENSPEMG00000012402	-	57	64.103	Peromyscus_maniculatus_bairdii
ENSCAFG00020013754	-	86	62.338	ENSPLAG00000013254	hnrnpa1b	74	62.338	Poecilia_latipinna
ENSCAFG00020013754	-	66	62.821	ENSPPYG00000017853	-	53	62.821	Pongo_abelii
ENSCAFG00020013754	-	78	39.706	ENSPPYG00000017695	-	59	39.706	Pongo_abelii
ENSCAFG00020013754	-	60	68.966	ENSPCOG00000027833	-	51	68.571	Propithecus_coquereli
ENSCAFG00020013754	-	69	66.667	ENSPCOG00000015986	-	56	66.667	Propithecus_coquereli
ENSCAFG00020013754	-	62	68.116	ENSPNYG00000017019	hnrnpa1b	50	68.116	Pundamilia_nyererei
ENSCAFG00020013754	-	59	63.077	ENSRNOG00000011100	AABR07040947.1	57	63.077	Rattus_norvegicus
ENSCAFG00020013754	-	75	66.216	ENSRNOG00000051748	AABR07060628.1	77	66.216	Rattus_norvegicus
ENSCAFG00020013754	-	69	66.667	ENSRBIG00000029387	HNRNPA1	56	66.667	Rhinopithecus_bieti
ENSCAFG00020013754	-	69	66.667	ENSRROG00000030782	-	56	66.667	Rhinopithecus_roxellana
ENSCAFG00020013754	-	69	66.667	ENSSBOG00000020034	-	56	66.667	Saimiri_boliviensis_boliviensis
ENSCAFG00020013754	-	69	57.692	ENSSARG00000010620	-	57	57.692	Sorex_araneus
ENSCAFG00020013754	-	68	64.935	ENSSARG00000008882	-	57	64.935	Sorex_araneus
ENSCAFG00020013754	-	68	63.636	ENSTNIG00000015047	hnrnpa1b	58	63.636	Tetraodon_nigroviridis
ENSCAFG00020013754	-	62	67.692	ENSTBEG00000016272	-	53	67.692	Tupaia_belangeri
ENSCAFG00020013754	-	69	44.872	ENSUMAG00000015788	-	51	44.872	Ursus_maritimus
ENSCAFG00020013754	-	65	67.532	ENSVVUG00000024413	-	51	67.532	Vulpes_vulpes
ENSCAFG00020013754	-	67	61.842	ENSXCOG00000019224	HNRNPA1P48	60	65.217	Xiphophorus_couchianus