EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCAFG00020013828 (Gene tree)
Gene ID
112674008
Gene Symbol
PABPC1L
Alias
C20orf119|PABPC1L1|dJ1069P2.3|ePAB
Full Name
poly(A) binding protein cytoplasmic 1 like
Gene Type
protein_coding
Species
Canis_lupus_dingo
Status
putative
Strand
Plus strand
Length
20762 bases
Position
chrQKWQ01002044.1:32599029-32619790
Accession
112674008
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAFP00020017262PABPPF00658.182.1e-2711
ENSCAFP00020017262RRM_5PF13893.62.7e-0811
ENSCAFP00020017262RRM_1PF00076.221.3e-8814
ENSCAFP00020017262RRM_1PF00076.221.3e-8824
ENSCAFP00020017262RRM_1PF00076.221.3e-8834
ENSCAFP00020017262RRM_1PF00076.221.3e-8844
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAFT00020020045PABPC1L-2011836XM_025470186ENSCAFP00020017262611 (aa)XP_025325971-
Gene Model
Click here to download ENSCAFG00020013828's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020013828's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCAFG00020013828PABPC1L6041.463ENSCAFG00020007711RBM235843.056
ENSCAFG00020013828PABPC1L6270.388ENSCAFG00020002052-9970.388
ENSCAFG00020013828PABPC1L6334.940ENSCAFG00020013836ELAVL29334.940
ENSCAFG00020013828PABPC1L6540.278ENSCAFG00020004614ELAVL39233.735
ENSCAFG00020013828PABPC1L5035.294ENSCAFG00020009731CELF37235.616
ENSCAFG00020013828PABPC1L6260.942ENSCAFG00020019182-5360.942
ENSCAFG00020013828PABPC1L5932.099ENSCAFG00020026232-8632.099
ENSCAFG00020013828PABPC1L7033.735ENSCAFG00020013581ELAVL48833.735
ENSCAFG00020013828PABPC1L5730.189ENSCAFG00020024980RBMS35640.323
ENSCAFG00020013828PABPC1L9963.110ENSCAFG00020004161PABPC49962.861
ENSCAFG00020013828PABPC1L5237.209ENSCAFG00020006479-6836.986
ENSCAFG00020013828PABPC1L5931.538ENSCAFG00020005823CELF26231.538
ENSCAFG00020013828PABPC1L9968.513ENSCAFG00020000440PABPC19968.829
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAFG00020013828PABPC1L9988.033ENSG00000101104PABPC1L9993.827Homo_sapiens
ENSCAFG00020013828PABPC1L9966.345ENSAPOG00000010842pabpc1l9966.345Acanthochromis_polyacanthus
ENSCAFG00020013828PABPC1L9981.435ENSAMEG00000004099PABPC1L10081.522Ailuropoda_melanoleuca
ENSCAFG00020013828PABPC1L9967.305ENSACIG00000021004-9967.305Amphilophus_citrinellus
ENSCAFG00020013828PABPC1L9966.509ENSAOCG00000006167-9966.509Amphiprion_ocellaris
ENSCAFG00020013828PABPC1L9968.548ENSAPEG00000010558-9781.188Amphiprion_percula
ENSCAFG00020013828PABPC1L9967.961ENSATEG00000007428pabpc1l9967.961Anabas_testudineus
ENSCAFG00020013828PABPC1L9774.468ENSAPLG00000008415PABPC1L9974.230Anas_platyrhynchos
ENSCAFG00020013828PABPC1L9973.836ENSACAG00000011841PABPC1L9873.836Anolis_carolinensis
ENSCAFG00020013828PABPC1L9986.393ENSANAG00000026826PABPC1L9986.393Aotus_nancymaae
ENSCAFG00020013828PABPC1L9967.250ENSACLG00000024791pabpc1l9967.250Astatotilapia_calliptera
ENSCAFG00020013828PABPC1L9971.132ENSAMXG00000013552pabpc1l9971.132Astyanax_mexicanus
ENSCAFG00020013828PABPC1L5997.619ENSBTAG00000055300-10097.619Bos_taurus
ENSCAFG00020013828PABPC1L6976.632ENSBTAG00000016849PABPC1L8476.632Bos_taurus
ENSCAFG00020013828PABPC1L9986.885ENSCJAG00000017628PABPC1L9986.885Callithrix_jacchus
ENSCAFG00020013828PABPC1L6077.586ENSCJAG00000038506-10077.586Callithrix_jacchus
ENSCAFG00020013828PABPC1L9981.762ENSCAFG00000009573PABPC1L10081.762Canis_familiaris
ENSCAFG00020013828PABPC1L9788.423ENSCHIG00000025759PABPC1L9188.423Capra_hircus
ENSCAFG00020013828PABPC1L9985.761ENSTSYG00000006645PABPC1L9985.761Carlito_syrichta
ENSCAFG00020013828PABPC1L9878.821ENSCAPG00000014519PABPC1L9978.821Cavia_aperea
ENSCAFG00020013828PABPC1L9981.656ENSCPOG00000013633PABPC1L9981.656Cavia_porcellus
ENSCAFG00020013828PABPC1L9986.066ENSCCAG00000023338PABPC1L9986.066Cebus_capucinus
ENSCAFG00020013828PABPC1L9988.033ENSCATG00000034065PABPC1L9988.033Cercocebus_atys
ENSCAFG00020013828PABPC1L9981.626ENSCLAG00000005298PABPC1L9981.626Chinchilla_lanigera
ENSCAFG00020013828PABPC1L9988.033ENSCSAG00000014242PABPC1L9988.033Chlorocebus_sabaeus
ENSCAFG00020013828PABPC1L7282.805ENSCPBG00000017755-9982.805Chrysemys_picta_bellii
ENSCAFG00020013828PABPC1L5480.303ENSCPBG00000007810-8380.303Chrysemys_picta_bellii
ENSCAFG00020013828PABPC1L9750.820ENSCING00000002796-9750.920Ciona_intestinalis
ENSCAFG00020013828PABPC1L9757.025ENSCSAVG00000003102-10081.507Ciona_savignyi
ENSCAFG00020013828PABPC1L8076.471ENSCSAVG00000004246-8578.313Ciona_savignyi
ENSCAFG00020013828PABPC1L9983.495ENSCANG00000037530PABPC1L9983.495Colobus_angolensis_palliatus
ENSCAFG00020013828PABPC1L9976.499ENSCGRG00001021938Pabpc1l9976.499Cricetulus_griseus_chok1gshd
ENSCAFG00020013828PABPC1L9976.499ENSCGRG00000007946Pabpc1l9976.499Cricetulus_griseus_crigri
ENSCAFG00020013828PABPC1L9964.238ENSCSEG00000021295pabpc1l9964.238Cynoglossus_semilaevis
ENSCAFG00020013828PABPC1L9968.871ENSCVAG00000015943-9987.023Cyprinodon_variegatus
ENSCAFG00020013828PABPC1L9970.080ENSDARG00000002597pabpc1l8887.692Danio_rerio
ENSCAFG00020013828PABPC1L9989.621ENSDNOG00000048450PABPC1L9989.621Dasypus_novemcinctus
ENSCAFG00020013828PABPC1L9985.173ENSDORG00000001067Pabpc1l9985.173Dipodomys_ordii
ENSCAFG00020013828PABPC1L9490.650ENSETEG00000009969PABPC1L7290.650Echinops_telfairi
ENSCAFG00020013828PABPC1L5997.024ENSEASG00005023408-10097.024Equus_asinus_asinus
ENSCAFG00020013828PABPC1L5680.102ENSEASG00005023407-7980.102Equus_asinus_asinus
ENSCAFG00020013828PABPC1L6788.158ENSECAG00000040139-8288.158Equus_caballus
ENSCAFG00020013828PABPC1L9984.804ENSEEUG00000005978PABPC1L9984.804Erinaceus_europaeus
ENSCAFG00020013828PABPC1L9969.697ENSELUG00000001811pabpc1l9969.697Esox_lucius
ENSCAFG00020013828PABPC1L10093.944ENSFCAG00000011692PABPC1L10093.944Felis_catus
ENSCAFG00020013828PABPC1L8476.108ENSFALG00000005372PABPC1L8776.108Ficedula_albicollis
ENSCAFG00020013828PABPC1L9980.519ENSFDAG00000008291PABPC1L9980.519Fukomys_damarensis
ENSCAFG00020013828PABPC1L9969.756ENSFHEG00000003398pabpc1l9969.756Fundulus_heteroclitus
ENSCAFG00020013828PABPC1L10068.489ENSGMOG00000004437pabpc1l9969.032Gadus_morhua
ENSCAFG00020013828PABPC1L9770.812ENSGALG00000004123PABPC1L9984.652Gallus_gallus
ENSCAFG00020013828PABPC1L9965.591ENSGAFG00000021057pabpc1l9965.591Gambusia_affinis
ENSCAFG00020013828PABPC1L9966.720ENSGACG00000002792pabpc1l10066.720Gasterosteus_aculeatus
ENSCAFG00020013828PABPC1L9975.598ENSGAGG00000000589PABPC1L9875.598Gopherus_agassizii
ENSCAFG00020013828PABPC1L9988.361ENSGGOG00000004584PABPC1L9988.361Gorilla_gorilla
ENSCAFG00020013828PABPC1L9967.091ENSHBUG00000006134pabpc1l9967.091Haplochromis_burtoni
ENSCAFG00020013828PABPC1L9982.602ENSHGLG00000008434PABPC1L9982.602Heterocephalus_glaber_female
ENSCAFG00020013828PABPC1L5982.584ENSHGLG00100019506-10082.584Heterocephalus_glaber_male
ENSCAFG00020013828PABPC1L9982.602ENSHGLG00100012151PABPC1L9982.602Heterocephalus_glaber_male
ENSCAFG00020013828PABPC1L9967.434ENSHCOG00000009270pabpc1l9968.000Hippocampus_comes
ENSCAFG00020013828PABPC1L9971.656ENSIPUG00000012602pabpc1l9971.656Ictalurus_punctatus
ENSCAFG00020013828PABPC1L6060.345ENSIPUG00000006760-8860.345Ictalurus_punctatus
ENSCAFG00020013828PABPC1L6060.920ENSIPUG00000006780-8560.920Ictalurus_punctatus
ENSCAFG00020013828PABPC1L5364.615ENSIPUG00000005537-10064.615Ictalurus_punctatus
ENSCAFG00020013828PABPC1L9986.885ENSSTOG00000003739PABPC1L9986.885Ictidomys_tridecemlineatus
ENSCAFG00020013828PABPC1L9968.807ENSJJAG00000022406Pabpc1l9965.630Jaculus_jaculus
ENSCAFG00020013828PABPC1L9969.256ENSKMAG00000016847pabpc1l9969.256Kryptolebias_marmoratus
ENSCAFG00020013828PABPC1L9966.561ENSLBEG00000010084pabpc1l9966.561Labrus_bergylta
ENSCAFG00020013828PABPC1L9969.668ENSLACG00000005762PABPC1L9869.668Latimeria_chalumnae
ENSCAFG00020013828PABPC1L10070.365ENSLOCG00000007519pabpc1l9970.365Lepisosteus_oculatus
ENSCAFG00020013828PABPC1L9984.295ENSLAFG00000003553PABPC1L10084.295Loxodonta_africana
ENSCAFG00020013828PABPC1L9988.361ENSMFAG00000040365PABPC1L9988.361Macaca_fascicularis
ENSCAFG00020013828PABPC1L9985.971ENSMNEG00000032298PABPC1L9985.971Macaca_nemestrina
ENSCAFG00020013828PABPC1L9988.033ENSMLEG00000043139PABPC1L9988.033Mandrillus_leucophaeus
ENSCAFG00020013828PABPC1L9866.884ENSMAMG00000011854pabpc1l9866.884Mastacembelus_armatus
ENSCAFG00020013828PABPC1L9967.250ENSMZEG00005023713pabpc1l9967.250Maylandia_zebra
ENSCAFG00020013828PABPC1L9974.718ENSMGAG00000003674PABPC1L9874.718Meleagris_gallopavo
ENSCAFG00020013828PABPC1L9974.878ENSMOCG00000013186Pabpc1l9974.878Microtus_ochrogaster
ENSCAFG00020013828PABPC1L9968.226ENSMMOG00000020574-9087.692Mola_mola
ENSCAFG00020013828PABPC1L9478.694ENSMODG00000016198PABPC1L9978.798Monodelphis_domestica
ENSCAFG00020013828PABPC1L9767.875ENSMALG00000021622pabpc1l10067.875Monopterus_albus
ENSCAFG00020013828PABPC1L9976.175MGP_CAROLIEiJ_G0024627Pabpc1l10076.175Mus_caroli
ENSCAFG00020013828PABPC1L9975.851ENSMUSG00000054582Pabpc1l10075.851Mus_musculus
ENSCAFG00020013828PABPC1L9976.423MGP_PahariEiJ_G0026071Pabpc1l9976.423Mus_pahari
ENSCAFG00020013828PABPC1L9976.013MGP_SPRETEiJ_G0025549Pabpc1l10076.013Mus_spretus
ENSCAFG00020013828PABPC1L10091.304ENSMPUG00000017646PABPC1L10091.304Mustela_putorius_furo
ENSCAFG00020013828PABPC1L9882.362ENSMLUG00000006324PABPC1L9782.362Myotis_lucifugus
ENSCAFG00020013828PABPC1L9978.758ENSNGAG00000010458Pabpc1l9978.758Nannospalax_galili
ENSCAFG00020013828PABPC1L9773.558ENSNBRG00000016633pabpc1l9973.558Neolamprologus_brichardi
ENSCAFG00020013828PABPC1L9967.210ENSMEUG00000007905-9967.210Notamacropus_eugenii
ENSCAFG00020013828PABPC1L9985.597ENSOPRG00000011846PABPC1L9985.597Ochotona_princeps
ENSCAFG00020013828PABPC1L9974.590ENSODEG00000015482PABPC1L9974.590Octodon_degus
ENSCAFG00020013828PABPC1L5875.625ENSODEG00000002920-9775.625Octodon_degus
ENSCAFG00020013828PABPC1L9967.409ENSONIG00000017314pabpc1l9967.409Oreochromis_niloticus
ENSCAFG00020013828PABPC1L8967.269ENSOANG00000015793-10067.269Ornithorhynchus_anatinus
ENSCAFG00020013828PABPC1L9978.241ENSOCUG00000003005PABPC1L9978.241Oryctolagus_cuniculus
ENSCAFG00020013828PABPC1L9968.006ENSORLG00000010322pabpc1l9968.328Oryzias_latipes
ENSCAFG00020013828PABPC1L9967.846ENSORLG00020021193pabpc1l9968.167Oryzias_latipes_hni
ENSCAFG00020013828PABPC1L9967.846ENSORLG00015017018pabpc1l9968.167Oryzias_latipes_hsok
ENSCAFG00020013828PABPC1L9964.947ENSOMEG00000010789pabpc1l9964.947Oryzias_melastigma
ENSCAFG00020013828PABPC1L9984.295ENSOGAG00000032999PABPC1L10084.295Otolemur_garnettii
ENSCAFG00020013828PABPC1L9988.633ENSOARG00000004578PABPC1L9988.633Ovis_aries
ENSCAFG00020013828PABPC1L9987.869ENSPPAG00000039677PABPC1L9987.869Pan_paniscus
ENSCAFG00020013828PABPC1L6383.642ENSPPRG00000019327-9883.642Panthera_pardus
ENSCAFG00020013828PABPC1L9993.854ENSPTIG00000006524PABPC1L9993.854Panthera_tigris_altaica
ENSCAFG00020013828PABPC1L6393.519ENSPTRG00000013531PABPC1L9993.519Pan_troglodytes
ENSCAFG00020013828PABPC1L9988.033ENSPANG00000018788PABPC1L9988.033Papio_anubis
ENSCAFG00020013828PABPC1L5483.206ENSPKIG00000016810-9383.206Paramormyrops_kingsleyae
ENSCAFG00020013828PABPC1L9970.080ENSPKIG00000007322pabpc1l9970.080Paramormyrops_kingsleyae
ENSCAFG00020013828PABPC1L6884.652ENSPSIG00000013289PABPC1L9984.652Pelodiscus_sinensis
ENSCAFG00020013828PABPC1L7167.337ENSPMGG00000023121-9367.337Periophthalmus_magnuspinnatus
ENSCAFG00020013828PABPC1L6386.364ENSPMGG00000023117pabpc1l9286.364Periophthalmus_magnuspinnatus
ENSCAFG00020013828PABPC1L9975.243ENSPEMG00000020671Pabpc1l9976.013Peromyscus_maniculatus_bairdii
ENSCAFG00020013828PABPC1L9969.368ENSPFOG00000013241pabpc1l9969.305Poecilia_formosa
ENSCAFG00020013828PABPC1L5388.462ENSPLAG00000023686-9288.462Poecilia_latipinna
ENSCAFG00020013828PABPC1L9969.144ENSPLAG00000017490-9969.144Poecilia_latipinna
ENSCAFG00020013828PABPC1L9969.368ENSPMEG00000007677pabpc1l9969.368Poecilia_mexicana
ENSCAFG00020013828PABPC1L5388.462ENSPMEG00000009185-8888.462Poecilia_mexicana
ENSCAFG00020013828PABPC1L6876.998ENSPREG00000015886pabpc1l9976.998Poecilia_reticulata
ENSCAFG00020013828PABPC1L9988.091ENSPPYG00000011042PABPC1L9988.091Pongo_abelii
ENSCAFG00020013828PABPC1L6293.750ENSPCAG00000011787-7593.750Procavia_capensis
ENSCAFG00020013828PABPC1L9985.997ENSPCOG00000020630PABPC1L9985.997Propithecus_coquereli
ENSCAFG00020013828PABPC1L9988.707ENSPVAG00000012663PABPC1L10088.707Pteropus_vampyrus
ENSCAFG00020013828PABPC1L9773.558ENSPNYG00000004101pabpc1l9973.558Pundamilia_nyererei
ENSCAFG00020013828PABPC1L9964.217ENSPNAG00000021248pabpc1l9964.217Pygocentrus_nattereri
ENSCAFG00020013828PABPC1L9975.733ENSRNOG00000012750Pabpc1l9975.733Rattus_norvegicus
ENSCAFG00020013828PABPC1L9987.705ENSRBIG00000035381PABPC1L9987.705Rhinopithecus_bieti
ENSCAFG00020013828PABPC1L9987.541ENSRROG00000044498PABPC1L9987.541Rhinopithecus_roxellana
ENSCAFG00020013828PABPC1L9986.393ENSSBOG00000009532-9986.393Saimiri_boliviensis_boliviensis
ENSCAFG00020013828PABPC1L9771.926ENSSHAG00000011446PABPC1L10071.926Sarcophilus_harrisii
ENSCAFG00020013828PABPC1L9971.704ENSSFOG00015017304pabpc1l9971.704Scleropages_formosus
ENSCAFG00020013828PABPC1L9967.145ENSSMAG00000010516pabpc1l9387.597Scophthalmus_maximus
ENSCAFG00020013828PABPC1L9968.203ENSSDUG00000014743pabpc1l9968.203Seriola_dumerili
ENSCAFG00020013828PABPC1L9874.760ENSSLDG00000006981pabpc1l9878.995Seriola_lalandi_dorsalis
ENSCAFG00020013828PABPC1L9972.930ENSSPUG00000004233PABPC1L9872.930Sphenodon_punctatus
ENSCAFG00020013828PABPC1L9966.392ENSSPAG00000017137pabpc1l9966.392Stegastes_partitus
ENSCAFG00020013828PABPC1L9988.506ENSSSCG00000007382PABPC1L9988.506Sus_scrofa
ENSCAFG00020013828PABPC1L9973.376ENSTGUG00000005114PABPC1L9973.376Taeniopygia_guttata
ENSCAFG00020013828PABPC1L9767.594ENSTRUG00000011085pabpc1l9767.594Takifugu_rubripes
ENSCAFG00020013828PABPC1L9965.440ENSTNIG00000017903pabpc1l9865.440Tetraodon_nigroviridis
ENSCAFG00020013828PABPC1L9493.836ENSTBEG00000002851PABPC1L8093.836Tupaia_belangeri
ENSCAFG00020013828PABPC1L9487.979ENSTTRG00000007618PABPC1L10087.627Tursiops_truncatus
ENSCAFG00020013828PABPC1L10089.216ENSUAMG00000017682PABPC1L10089.216Ursus_americanus
ENSCAFG00020013828PABPC1L6892.412ENSUMAG00000025436PABPC1L9492.412Ursus_maritimus
ENSCAFG00020013828PABPC1L9999.605ENSVVUG00000018939PABPC1L10099.605Vulpes_vulpes
ENSCAFG00020013828PABPC1L9969.181ENSXETG00000022831pabpc1l9869.181Xenopus_tropicalis
ENSCAFG00020013828PABPC1L9969.707ENSXCOG00000005459pabpc1l9983.688Xiphophorus_couchianus
ENSCAFG00020013828PABPC1L9969.144ENSXMAG00000017135pabpc1l9969.144Xiphophorus_maculatus

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