EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020014267 (Gene tree)
Gene ID: 112653399
Gene Symbol: -
Alias: -
Full Name: signal recognition particle 19
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 4973 bases
Position: chrQKWQ01000898.1:92577767-92582739
Accession: 112653399
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020017844	SRP19	PF01922.17	6.8e-29	1	1
ENSCAFP00020017845	SRP19	PF01922.17	1.9e-14	1	2
ENSCAFP00020017845	SRP19	PF01922.17	1.9e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020020702	-	363	-	ENSCAFP00020017845	120 (aa)	-	UPI0002257640
ENSCAFT00020020701	-	435	-	ENSCAFP00020017844	144 (aa)	XP_025293317	UPI00004A450C

Gene Model

Click here to download ENSCAFG00020014267's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020014267's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020014267	-	92	100.000	ENSCAFG00020022437	-	99	100.000
ENSCAFG00020014267	-	67	92.784	ENSCAFG00020008822	-	76	96.667
ENSCAFG00020014267	-	72	96.154	ENSCAFG00020004285	-	93	96.154

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020014267	-	100	98.611	ENSG00000153037	SRP19	100	99.010	Homo_sapiens
ENSCAFG00020014267	-	90	68.992	ENSAPOG00000002199	srp19	90	68.992	Acanthochromis_polyacanthus
ENSCAFG00020014267	-	100	97.917	ENSAMEG00000012623	SRP19	99	97.917	Ailuropoda_melanoleuca
ENSCAFG00020014267	-	90	67.442	ENSACIG00000005082	srp19	89	67.969	Amphilophus_citrinellus
ENSCAFG00020014267	-	90	68.217	ENSAOCG00000002718	srp19	91	68.217	Amphiprion_ocellaris
ENSCAFG00020014267	-	90	68.217	ENSAPEG00000022170	srp19	91	68.217	Amphiprion_percula
ENSCAFG00020014267	-	90	70.543	ENSATEG00000012472	srp19	91	70.543	Anabas_testudineus
ENSCAFG00020014267	-	78	86.726	ENSAPLG00000002624	SRP19	93	86.087	Anas_platyrhynchos
ENSCAFG00020014267	-	92	79.699	ENSACAG00000007550	SRP19	92	79.851	Anolis_carolinensis
ENSCAFG00020014267	-	100	98.611	ENSANAG00000032576	-	100	98.611	Aotus_nancymaae
ENSCAFG00020014267	-	95	75.912	ENSANAG00000030287	-	97	76.515	Aotus_nancymaae
ENSCAFG00020014267	-	90	77.692	ENSANAG00000029862	-	89	90.722	Aotus_nancymaae
ENSCAFG00020014267	-	89	66.406	ENSACLG00000006259	srp19	90	66.406	Astatotilapia_calliptera
ENSCAFG00020014267	-	88	68.504	ENSAMXG00000043011	srp19	90	68.750	Astyanax_mexicanus
ENSCAFG00020014267	-	100	97.917	ENSBTAG00000012803	SRP19	100	97.917	Bos_taurus
ENSCAFG00020014267	-	82	50.000	WBGene00018159	F37F2.2	82	50.000	Caenorhabditis_elegans
ENSCAFG00020014267	-	91	75.573	ENSCJAG00000045531	-	85	75.188	Callithrix_jacchus
ENSCAFG00020014267	-	100	97.500	ENSCJAG00000038676	-	100	97.500	Callithrix_jacchus
ENSCAFG00020014267	-	100	100.000	ENSCAFG00000031549	SRP19	100	100.000	Canis_familiaris
ENSCAFG00020014267	-	100	97.917	ENSCHIG00000017551	SRP19	100	97.917	Capra_hircus
ENSCAFG00020014267	-	100	99.306	ENSTSYG00000007875	SRP19	100	99.306	Carlito_syrichta
ENSCAFG00020014267	-	99	75.524	ENSCPOG00000036806	SRP19	83	88.288	Cavia_porcellus
ENSCAFG00020014267	-	92	75.000	ENSCCAG00000029821	-	66	75.000	Cebus_capucinus
ENSCAFG00020014267	-	92	79.699	ENSCCAG00000023426	-	87	79.699	Cebus_capucinus
ENSCAFG00020014267	-	100	98.611	ENSCCAG00000035651	-	100	98.611	Cebus_capucinus
ENSCAFG00020014267	-	94	91.111	ENSCATG00000039250	-	93	91.111	Cercocebus_atys
ENSCAFG00020014267	-	88	84.252	ENSCATG00000040513	-	80	83.846	Cercocebus_atys
ENSCAFG00020014267	-	93	95.495	ENSCLAG00000004791	-	93	95.495	Chinchilla_lanigera
ENSCAFG00020014267	-	94	88.148	ENSCLAG00000016055	-	93	88.148	Chinchilla_lanigera
ENSCAFG00020014267	-	100	97.222	ENSCHOG00000013452	SRP19	100	97.222	Choloepus_hoffmanni
ENSCAFG00020014267	-	90	80.620	ENSCPBG00000013903	SRP19	91	80.769	Chrysemys_picta_bellii
ENSCAFG00020014267	-	94	94.815	ENSCGRG00001020510	Srp19	94	94.815	Cricetulus_griseus_chok1gshd
ENSCAFG00020014267	-	83	85.833	ENSCGRG00000008542	-	92	85.833	Cricetulus_griseus_crigri
ENSCAFG00020014267	-	67	89.109	ENSCGRG00000010716	-	89	89.109	Cricetulus_griseus_crigri
ENSCAFG00020014267	-	89	69.531	ENSCSEG00000010039	srp19	89	70.079	Cynoglossus_semilaevis
ENSCAFG00020014267	-	88	70.866	ENSCVAG00000017621	srp19	89	70.866	Cyprinodon_variegatus
ENSCAFG00020014267	-	88	70.635	ENSDARG00000035699	srp19	89	70.866	Danio_rerio
ENSCAFG00020014267	-	94	95.556	ENSDNOG00000013856	SRP19	94	95.556	Dasypus_novemcinctus
ENSCAFG00020014267	-	77	92.241	ENSDORG00000004746	Srp19	91	92.241	Dipodomys_ordii
ENSCAFG00020014267	-	85	50.407	FBgn0015298	Srp19	70	52.212	Drosophila_melanogaster
ENSCAFG00020014267	-	94	92.593	ENSETEG00000017132	SRP19	94	92.593	Echinops_telfairi
ENSCAFG00020014267	-	81	64.957	ENSEBUG00000006613	srp19	87	63.710	Eptatretus_burgeri
ENSCAFG00020014267	-	100	97.222	ENSEASG00005015182	SRP19	100	97.222	Equus_asinus_asinus
ENSCAFG00020014267	-	100	97.917	ENSEEUG00000007298	SRP19	100	97.917	Erinaceus_europaeus
ENSCAFG00020014267	-	89	70.312	ENSELUG00000007958	srp19	91	70.543	Esox_lucius
ENSCAFG00020014267	-	90	68.217	ENSELUG00000004594	srp19	91	68.217	Esox_lucius
ENSCAFG00020014267	-	100	99.306	ENSFCAG00000025895	SRP19	100	99.306	Felis_catus
ENSCAFG00020014267	-	94	94.815	ENSFDAG00000013543	SRP19	94	94.815	Fukomys_damarensis
ENSCAFG00020014267	-	88	70.079	ENSFHEG00000000493	srp19	89	70.079	Fundulus_heteroclitus
ENSCAFG00020014267	-	83	72.500	ENSGMOG00000003264	srp19	93	72.500	Gadus_morhua
ENSCAFG00020014267	-	92	84.962	ENSGALG00000000218	SRP19	93	85.075	Gallus_gallus
ENSCAFG00020014267	-	87	71.200	ENSGAFG00000015815	srp19	60	71.200	Gambusia_affinis
ENSCAFG00020014267	-	88	70.866	ENSGACG00000001093	srp19	85	70.866	Gasterosteus_aculeatus
ENSCAFG00020014267	-	92	81.203	ENSGAGG00000025305	SRP19	94	80.741	Gopherus_agassizii
ENSCAFG00020014267	-	90	66.923	ENSHBUG00000006131	srp19	90	66.923	Haplochromis_burtoni
ENSCAFG00020014267	-	94	95.556	ENSHGLG00000006075	SRP19	94	95.556	Heterocephalus_glaber_female
ENSCAFG00020014267	-	94	95.556	ENSHGLG00100015859	SRP19	94	95.556	Heterocephalus_glaber_male
ENSCAFG00020014267	-	89	66.406	ENSHCOG00000013231	srp19	90	66.406	Hippocampus_comes
ENSCAFG00020014267	-	88	69.048	ENSIPUG00000025084	srp19	92	66.964	Ictalurus_punctatus
ENSCAFG00020014267	-	100	96.667	ENSSTOG00000000348	SRP19	100	96.667	Ictidomys_tridecemlineatus
ENSCAFG00020014267	-	100	96.528	ENSJJAG00000017185	Srp19	100	96.528	Jaculus_jaculus
ENSCAFG00020014267	-	91	70.229	ENSKMAG00000011155	srp19	92	70.229	Kryptolebias_marmoratus
ENSCAFG00020014267	-	88	70.079	ENSLBEG00000026727	srp19	89	70.079	Labrus_bergylta
ENSCAFG00020014267	-	88	81.746	ENSLACG00000004459	SRP19	82	81.890	Latimeria_chalumnae
ENSCAFG00020014267	-	89	75.781	ENSLOCG00000010302	srp19	91	75.969	Lepisosteus_oculatus
ENSCAFG00020014267	-	100	96.528	ENSLAFG00000002564	SRP19	100	96.528	Loxodonta_africana
ENSCAFG00020014267	-	83	75.630	ENSMFAG00000040055	-	90	76.033	Macaca_fascicularis
ENSCAFG00020014267	-	88	90.551	ENSMFAG00000000554	-	90	90.551	Macaca_fascicularis
ENSCAFG00020014267	-	88	90.551	ENSMMUG00000049186	-	90	90.551	Macaca_mulatta
ENSCAFG00020014267	-	85	84.553	ENSMMUG00000032515	-	92	84.800	Macaca_mulatta
ENSCAFG00020014267	-	83	74.790	ENSMNEG00000040117	-	90	75.207	Macaca_nemestrina
ENSCAFG00020014267	-	100	97.917	ENSMNEG00000038714	SRP19	100	97.917	Macaca_nemestrina
ENSCAFG00020014267	-	90	69.767	ENSMAMG00000018346	srp19	90	69.767	Mastacembelus_armatus
ENSCAFG00020014267	-	90	66.923	ENSMZEG00005001765	srp19	90	66.923	Maylandia_zebra
ENSCAFG00020014267	-	83	86.667	ENSMGAG00000006762	SRP19	93	86.066	Meleagris_gallopavo
ENSCAFG00020014267	-	100	97.222	ENSMICG00000000399	SRP19	100	97.222	Microcebus_murinus
ENSCAFG00020014267	-	67	89.691	ENSMICG00000049202	-	91	90.099	Microcebus_murinus
ENSCAFG00020014267	-	67	94.845	ENSMOCG00000010532	-	89	94.845	Microtus_ochrogaster
ENSCAFG00020014267	-	94	95.556	ENSMOCG00000006534	Srp19	94	95.556	Microtus_ochrogaster
ENSCAFG00020014267	-	92	69.925	ENSMMOG00000010417	srp19	86	69.925	Mola_mola
ENSCAFG00020014267	-	90	93.023	ENSMODG00000013278	SRP19	91	93.077	Monodelphis_domestica
ENSCAFG00020014267	-	88	72.441	ENSMALG00000003858	srp19	89	72.441	Monopterus_albus
ENSCAFG00020014267	-	94	94.815	MGP_CAROLIEiJ_G0022086	Srp19	98	97.436	Mus_caroli
ENSCAFG00020014267	-	94	94.815	ENSMUSG00000014504	Srp19	98	97.436	Mus_musculus
ENSCAFG00020014267	-	94	94.815	MGP_PahariEiJ_G0018820	Srp19	98	94.872	Mus_pahari
ENSCAFG00020014267	-	94	94.815	MGP_SPRETEiJ_G0022998	Srp19	98	97.436	Mus_spretus
ENSCAFG00020014267	-	100	98.611	ENSMPUG00000012695	SRP19	99	98.611	Mustela_putorius_furo
ENSCAFG00020014267	-	100	96.528	ENSMLUG00000014793	-	100	96.528	Myotis_lucifugus
ENSCAFG00020014267	-	86	91.935	ENSMLUG00000024549	-	90	92.000	Myotis_lucifugus
ENSCAFG00020014267	-	90	87.692	ENSNGAG00000014524	-	100	87.692	Nannospalax_galili
ENSCAFG00020014267	-	94	95.556	ENSNGAG00000003440	-	94	95.556	Nannospalax_galili
ENSCAFG00020014267	-	94	84.444	ENSNLEG00000035364	-	89	89.691	Nomascus_leucogenys
ENSCAFG00020014267	-	83	95.798	ENSMEUG00000012529	SRP19	93	95.041	Notamacropus_eugenii
ENSCAFG00020014267	-	81	94.872	ENSOPRG00000010549	SRP19	93	93.388	Ochotona_princeps
ENSCAFG00020014267	-	91	90.076	ENSODEG00000019119	-	94	89.630	Octodon_degus
ENSCAFG00020014267	-	67	92.784	ENSODEG00000005538	-	85	92.784	Octodon_degus
ENSCAFG00020014267	-	91	76.336	ENSODEG00000013862	-	94	77.037	Octodon_degus
ENSCAFG00020014267	-	90	65.891	ENSONIG00000000542	srp19	91	65.891	Oreochromis_niloticus
ENSCAFG00020014267	-	88	83.333	ENSOANG00000011139	SRP19	73	83.465	Ornithorhynchus_anatinus
ENSCAFG00020014267	-	94	94.118	ENSOCUG00000015639	SRP19	94	94.118	Oryctolagus_cuniculus
ENSCAFG00020014267	-	90	68.217	ENSORLG00000028267	srp19	91	68.217	Oryzias_latipes
ENSCAFG00020014267	-	90	68.217	ENSORLG00020015201	srp19	91	68.217	Oryzias_latipes_hni
ENSCAFG00020014267	-	90	68.217	ENSORLG00015007525	srp19	91	68.217	Oryzias_latipes_hsok
ENSCAFG00020014267	-	90	69.767	ENSOMEG00000009178	srp19	91	69.767	Oryzias_melastigma
ENSCAFG00020014267	-	100	97.222	ENSOGAG00000008579	SRP19	100	97.222	Otolemur_garnettii
ENSCAFG00020014267	-	100	97.222	ENSOARG00000016066	SRP19	100	97.222	Ovis_aries
ENSCAFG00020014267	-	100	98.611	ENSPPAG00000037062	SRP19	100	98.611	Pan_paniscus
ENSCAFG00020014267	-	100	99.306	ENSPPRG00000015591	SRP19	100	99.306	Panthera_pardus
ENSCAFG00020014267	-	100	99.306	ENSPTIG00000021474	SRP19	100	99.306	Panthera_tigris_altaica
ENSCAFG00020014267	-	100	98.611	ENSPTRG00000017136	SRP19	100	98.611	Pan_troglodytes
ENSCAFG00020014267	-	100	97.917	ENSPANG00000004370	-	100	97.917	Papio_anubis
ENSCAFG00020014267	-	94	90.370	ENSPANG00000034740	-	93	90.370	Papio_anubis
ENSCAFG00020014267	-	90	68.992	ENSPKIG00000018671	srp19	91	68.992	Paramormyrops_kingsleyae
ENSCAFG00020014267	-	83	83.333	ENSPSIG00000013811	SRP19	93	82.787	Pelodiscus_sinensis
ENSCAFG00020014267	-	90	68.992	ENSPMGG00000015313	srp19	91	68.992	Periophthalmus_magnuspinnatus
ENSCAFG00020014267	-	100	92.361	ENSPEMG00000004412	-	100	92.361	Peromyscus_maniculatus_bairdii
ENSCAFG00020014267	-	90	63.077	ENSPMAG00000002685	srp19	91	63.566	Petromyzon_marinus
ENSCAFG00020014267	-	90	93.798	ENSPCIG00000010250	SRP19	90	93.846	Phascolarctos_cinereus
ENSCAFG00020014267	-	88	70.079	ENSPFOG00000015887	srp19	89	70.079	Poecilia_formosa
ENSCAFG00020014267	-	88	70.079	ENSPLAG00000007784	srp19	89	70.079	Poecilia_latipinna
ENSCAFG00020014267	-	88	69.291	ENSPMEG00000003056	srp19	87	71.579	Poecilia_mexicana
ENSCAFG00020014267	-	88	70.079	ENSPREG00000017307	srp19	89	70.079	Poecilia_reticulata
ENSCAFG00020014267	-	100	98.611	ENSPPYG00000029584	SRP19	99	98.611	Pongo_abelii
ENSCAFG00020014267	-	94	75.556	ENSPCAG00000000228	SRP19	94	75.556	Procavia_capensis
ENSCAFG00020014267	-	100	98.611	ENSPCOG00000023239	SRP19	100	98.611	Propithecus_coquereli
ENSCAFG00020014267	-	100	97.917	ENSPVAG00000004895	SRP19	100	97.917	Pteropus_vampyrus
ENSCAFG00020014267	-	88	67.460	ENSPNAG00000009392	srp19	88	69.167	Pygocentrus_nattereri
ENSCAFG00020014267	-	94	94.815	ENSRNOG00000020204	Srp19	94	94.815	Rattus_norvegicus
ENSCAFG00020014267	-	100	97.917	ENSRBIG00000015627	-	100	97.917	Rhinopithecus_bieti
ENSCAFG00020014267	-	92	87.218	ENSRBIG00000040440	-	93	87.313	Rhinopithecus_bieti
ENSCAFG00020014267	-	52	92.000	ENSRBIG00000031651	-	83	92.000	Rhinopithecus_bieti
ENSCAFG00020014267	-	86	79.032	ENSRROG00000037316	-	92	79.675	Rhinopithecus_roxellana
ENSCAFG00020014267	-	92	87.218	ENSRROG00000037054	-	93	87.313	Rhinopithecus_roxellana
ENSCAFG00020014267	-	100	98.611	ENSSBOG00000028071	-	100	98.611	Saimiri_boliviensis_boliviensis
ENSCAFG00020014267	-	94	72.593	ENSSBOG00000032685	-	89	80.808	Saimiri_boliviensis_boliviensis
ENSCAFG00020014267	-	90	72.093	ENSSFOG00015022139	srp19	91	72.093	Scleropages_formosus
ENSCAFG00020014267	-	90	65.891	ENSSMAG00000016803	srp19	90	65.891	Scophthalmus_maximus
ENSCAFG00020014267	-	90	62.143	ENSSDUG00000012930	srp19	91	62.143	Seriola_dumerili
ENSCAFG00020014267	-	61	54.545	ENSSLDG00000021916	-	57	54.545	Seriola_lalandi_dorsalis
ENSCAFG00020014267	-	94	95.556	ENSSARG00000000615	SRP19	94	95.556	Sorex_araneus
ENSCAFG00020014267	-	85	86.179	ENSSPUG00000015769	SRP19	90	86.260	Sphenodon_punctatus
ENSCAFG00020014267	-	100	98.611	ENSSSCG00000026230	SRP19	100	98.611	Sus_scrofa
ENSCAFG00020014267	-	85	85.366	ENSTGUG00000001019	SRP19	91	84.211	Taeniopygia_guttata
ENSCAFG00020014267	-	88	71.538	ENSTRUG00000023119	srp19	90	71.538	Takifugu_rubripes
ENSCAFG00020014267	-	90	69.767	ENSTNIG00000018880	srp19	91	69.767	Tetraodon_nigroviridis
ENSCAFG00020014267	-	100	97.222	ENSTTRG00000001690	SRP19	100	97.222	Tursiops_truncatus
ENSCAFG00020014267	-	100	97.917	ENSUAMG00000000111	SRP19	100	97.917	Ursus_americanus
ENSCAFG00020014267	-	100	98.611	ENSUMAG00000016997	SRP19	100	98.611	Ursus_maritimus
ENSCAFG00020014267	-	100	97.917	ENSVPAG00000006001	SRP19	100	97.917	Vicugna_pacos
ENSCAFG00020014267	-	74	99.057	ENSVVUG00000012423	SRP19	100	100.000	Vulpes_vulpes
ENSCAFG00020014267	-	84	72.727	ENSXETG00000011993	srp19	85	72.727	Xenopus_tropicalis
ENSCAFG00020014267	-	69	66.000	ENSXCOG00000012530	srp19	70	66.000	Xiphophorus_couchianus
ENSCAFG00020014267	-	92	69.697	ENSXMAG00000029788	srp19	89	70.866	Xiphophorus_maculatus