EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCAFG00020014268 (Gene tree)
Gene ID
112656004
Gene Symbol
UPF3A
Alias
HUPF3A|RENT3A|UPF3
Full Name
UPF3A%2C regulator of nonsense mediated mRNA decay
Gene Type
protein_coding
Species
Canis_lupus_dingo
Status
putative
Strand
Minus strand
Length
24933 bases
Position
chrQKWQ01002035.1:44460-69392
Accession
112656004
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAFP00020017833Smg4_UPF3PF03467.152.6e-5211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAFT00020020689UPF3A-2011428XM_025441212ENSCAFP00020017833475 (aa)XP_025296995UPI000DC69722
Gene Model
Click here to download ENSCAFG00020014268's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020014268's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCAFG00020014268UPF3A8445.320ENSCAFG00020004074UPF3B8645.610
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAFG00020014268UPF3A5852.857ENSG00000125351UPF3B8664.171Homo_sapiens
ENSCAFG00020014268UPF3A9774.249ENSG00000169062UPF3A9977.885Homo_sapiens
ENSCAFG00020014268UPF3A8744.240ENSAPOG00000012775upf3b9648.438Acanthochromis_polyacanthus
ENSCAFG00020014268UPF3A8543.326ENSAMEG00000000163UPF3B8944.573Ailuropoda_melanoleuca
ENSCAFG00020014268UPF3A9385.426ENSAMEG00000004259UPF3A9885.426Ailuropoda_melanoleuca
ENSCAFG00020014268UPF3A5355.513ENSAOCG00000000706upf3b9647.098Amphiprion_ocellaris
ENSCAFG00020014268UPF3A9654.428ENSATEG00000005843upf3a9155.022Anabas_testudineus
ENSCAFG00020014268UPF3A8070.604ENSACAG00000001540UPF3A9270.604Anolis_carolinensis
ENSCAFG00020014268UPF3A8346.135ENSACAG00000003625UPF3B9150.000Anolis_carolinensis
ENSCAFG00020014268UPF3A8245.161ENSANAG00000025598-8845.667Aotus_nancymaae
ENSCAFG00020014268UPF3A8245.522ENSANAG00000021894-8763.830Aotus_nancymaae
ENSCAFG00020014268UPF3A9573.026ENSANAG00000021713UPF3A9673.026Aotus_nancymaae
ENSCAFG00020014268UPF3A9655.098ENSAMXG00000002608upf3a9455.315Astyanax_mexicanus
ENSCAFG00020014268UPF3A9573.465ENSCJAG00000019102UPF3A9673.465Callithrix_jacchus
ENSCAFG00020014268UPF3A8245.274ENSCJAG00000004975UPF3B8763.298Callithrix_jacchus
ENSCAFG00020014268UPF3A9799.352ENSCAFG00000006504UPF3A10099.352Canis_familiaris
ENSCAFG00020014268UPF3A8445.122ENSCAFG00000018426UPF3B8846.845Canis_familiaris
ENSCAFG00020014268UPF3A9671.800ENSCHIG00000008682UPF3A9371.757Capra_hircus
ENSCAFG00020014268UPF3A7467.127ENSTSYG00000001918UPF3A9667.308Carlito_syrichta
ENSCAFG00020014268UPF3A8245.000ENSTSYG00000014690UPF3B8760.104Carlito_syrichta
ENSCAFG00020014268UPF3A9065.734ENSCPOG00000006824UPF3A9865.734Cavia_porcellus
ENSCAFG00020014268UPF3A8139.426ENSCCAG00000029813-8938.060Cebus_capucinus
ENSCAFG00020014268UPF3A9576.096ENSCCAG00000018406UPF3A9676.096Cebus_capucinus
ENSCAFG00020014268UPF3A9773.391ENSCATG00000029733UPF3A9873.391Cercocebus_atys
ENSCAFG00020014268UPF3A5255.823ENSCATG00000017506UPF3B8763.830Cercocebus_atys
ENSCAFG00020014268UPF3A5553.114ENSCLAG00000003260UPF3B9245.351Chinchilla_lanigera
ENSCAFG00020014268UPF3A9772.708ENSCSAG00000017388UPF3A9872.708Chlorocebus_sabaeus
ENSCAFG00020014268UPF3A5255.769ENSCGRG00001013643-9052.976Cricetulus_griseus_chok1gshd
ENSCAFG00020014268UPF3A5255.172ENSCGRG00001006858-9048.513Cricetulus_griseus_chok1gshd
ENSCAFG00020014268UPF3A9170.413ENSCGRG00001017387Upf3a10070.413Cricetulus_griseus_chok1gshd
ENSCAFG00020014268UPF3A9070.302ENSCGRG00000001468Upf3a9970.302Cricetulus_griseus_crigri
ENSCAFG00020014268UPF3A9157.143ENSCSEG00000005106upf3a9057.143Cynoglossus_semilaevis
ENSCAFG00020014268UPF3A8148.395ENSCSEG00000002046upf3b8849.195Cynoglossus_semilaevis
ENSCAFG00020014268UPF3A8158.586ENSCVAG00000022333upf3a8158.838Cyprinodon_variegatus
ENSCAFG00020014268UPF3A8774.419ENSDNOG00000034391UPF3A9875.870Dasypus_novemcinctus
ENSCAFG00020014268UPF3A5851.786ENSDORG00000006077Upf3b8948.736Dipodomys_ordii
ENSCAFG00020014268UPF3A9963.924ENSETEG00000010110UPF3A9764.346Echinops_telfairi
ENSCAFG00020014268UPF3A8246.867ENSEASG00005012919UPF3B8646.210Equus_asinus_asinus
ENSCAFG00020014268UPF3A9977.521ENSEASG00005021884UPF3A9877.521Equus_asinus_asinus
ENSCAFG00020014268UPF3A8246.867ENSECAG00000016947UPF3B8646.210Equus_caballus
ENSCAFG00020014268UPF3A9977.101ENSECAG00000017141UPF3A9877.101Equus_caballus
ENSCAFG00020014268UPF3A9455.165ENSELUG00000011050upf3a9155.165Esox_lucius
ENSCAFG00020014268UPF3A9979.747ENSFCAG00000014602UPF3A9879.747Felis_catus
ENSCAFG00020014268UPF3A5255.823ENSFCAG00000004388UPF3B8845.626Felis_catus
ENSCAFG00020014268UPF3A9341.090ENSFALG00000001569UPF3B8743.567Ficedula_albicollis
ENSCAFG00020014268UPF3A8444.552ENSFDAG00000018869UPF3B8646.731Fukomys_damarensis
ENSCAFG00020014268UPF3A6960.756ENSGMOG00000019615upf3a10060.756Gadus_morhua
ENSCAFG00020014268UPF3A5154.762ENSGMOG00000001621upf3b8846.793Gadus_morhua
ENSCAFG00020014268UPF3A6962.722ENSGACG00000001972upf3a10063.363Gasterosteus_aculeatus
ENSCAFG00020014268UPF3A5354.054ENSGACG00000017435upf3b9346.032Gasterosteus_aculeatus
ENSCAFG00020014268UPF3A8244.903ENSGAGG00000001219UPF3B8747.317Gopherus_agassizii
ENSCAFG00020014268UPF3A9657.143ENSGGOG00000043074-9757.143Gorilla_gorilla
ENSCAFG00020014268UPF3A9774.249ENSGGOG00000015428UPF3A9874.249Gorilla_gorilla
ENSCAFG00020014268UPF3A8861.137ENSGGOG00000041219-9658.920Gorilla_gorilla
ENSCAFG00020014268UPF3A5852.857ENSGGOG00000023995UPF3B6965.441Gorilla_gorilla
ENSCAFG00020014268UPF3A8369.873ENSHGLG00000001544UPF3A9169.873Heterocephalus_glaber_female
ENSCAFG00020014268UPF3A5452.308ENSHGLG00000011189-8743.784Heterocephalus_glaber_female
ENSCAFG00020014268UPF3A8742.523ENSHGLG00000019582-8645.894Heterocephalus_glaber_female
ENSCAFG00020014268UPF3A8369.873ENSHGLG00100013244UPF3A9169.873Heterocephalus_glaber_male
ENSCAFG00020014268UPF3A5452.308ENSHGLG00100001889-8744.262Heterocephalus_glaber_male
ENSCAFG00020014268UPF3A8741.568ENSHGLG00100002042-8645.192Heterocephalus_glaber_male
ENSCAFG00020014268UPF3A8248.030ENSHCOG00000017004upf3b8848.426Hippocampus_comes
ENSCAFG00020014268UPF3A8558.722ENSIPUG00000023450upf3a9554.604Ictalurus_punctatus
ENSCAFG00020014268UPF3A8444.524ENSSTOG00000001101UPF3B8846.262Ictidomys_tridecemlineatus
ENSCAFG00020014268UPF3A6150.820ENSJJAG00000000053Upf3b8846.136Jaculus_jaculus
ENSCAFG00020014268UPF3A9652.620ENSKMAG00000004381upf3a9154.585Kryptolebias_marmoratus
ENSCAFG00020014268UPF3A5159.449ENSLBEG00000028689upf3b5555.200Labrus_bergylta
ENSCAFG00020014268UPF3A6346.349ENSLACG00000006645UPF3A9441.714Latimeria_chalumnae
ENSCAFG00020014268UPF3A5065.587ENSLOCG00000015238upf3b9147.343Lepisosteus_oculatus
ENSCAFG00020014268UPF3A9659.300ENSLOCG00000002665upf3a9359.300Lepisosteus_oculatus
ENSCAFG00020014268UPF3A8460.563ENSLAFG00000023358UPF3A9960.187Loxodonta_africana
ENSCAFG00020014268UPF3A8743.287ENSLAFG00000001267UPF3B9444.714Loxodonta_africana
ENSCAFG00020014268UPF3A9769.083ENSMFAG00000045016UPF3A9868.644Macaca_fascicularis
ENSCAFG00020014268UPF3A5255.823ENSMFAG00000045414UPF3B8763.830Macaca_fascicularis
ENSCAFG00020014268UPF3A5255.823ENSMMUG00000020222UPF3B8763.830Macaca_mulatta
ENSCAFG00020014268UPF3A9371.973ENSMMUG00000007449UPF3A9870.753Macaca_mulatta
ENSCAFG00020014268UPF3A9766.876ENSMNEG00000036402UPF3A9866.876Macaca_nemestrina
ENSCAFG00020014268UPF3A5255.823ENSMNEG00000039794UPF3B8763.830Macaca_nemestrina
ENSCAFG00020014268UPF3A8373.618ENSMLEG00000014726UPF3A9273.618Mandrillus_leucophaeus
ENSCAFG00020014268UPF3A5255.823ENSMLEG00000010999UPF3B8763.830Mandrillus_leucophaeus
ENSCAFG00020014268UPF3A9054.120ENSMAMG00000018364upf3a8955.457Mastacembelus_armatus
ENSCAFG00020014268UPF3A7572.549ENSMGAG00000014837UPF3A8972.549Meleagris_gallopavo
ENSCAFG00020014268UPF3A8544.731ENSMAUG00000008705Upf3b8950.115Mesocricetus_auratus
ENSCAFG00020014268UPF3A6580.192ENSMOCG00000000550Upf3a8780.192Microtus_ochrogaster
ENSCAFG00020014268UPF3A8442.857ENSMOCG00000017893Upf3b8844.521Microtus_ochrogaster
ENSCAFG00020014268UPF3A8175.325ENSMODG00000003159UPF3A9075.130Monodelphis_domestica
ENSCAFG00020014268UPF3A8047.395ENSMODG00000010232UPF3B9251.861Monodelphis_domestica
ENSCAFG00020014268UPF3A8768.990MGP_CAROLIEiJ_G0030848Upf3a9968.966Mus_caroli
ENSCAFG00020014268UPF3A8743.249MGP_CAROLIEiJ_G0032999Upf3b9148.206Mus_caroli
ENSCAFG00020014268UPF3A6149.836ENSMUSG00000036572Upf3b9147.982Mus_musculus
ENSCAFG00020014268UPF3A8770.673ENSMUSG00000038398Upf3a9970.575Mus_musculus
ENSCAFG00020014268UPF3A8769.952MGP_PahariEiJ_G0021311Upf3a9969.885Mus_pahari
ENSCAFG00020014268UPF3A8543.925MGP_PahariEiJ_G0031543Upf3b8948.858Mus_pahari
ENSCAFG00020014268UPF3A6149.836MGP_SPRETEiJ_G0034152Upf3b9147.982Mus_spretus
ENSCAFG00020014268UPF3A8770.673MGP_SPRETEiJ_G0031958Upf3a9970.575Mus_spretus
ENSCAFG00020014268UPF3A9983.789ENSMPUG00000009139UPF3A9883.789Mustela_putorius_furo
ENSCAFG00020014268UPF3A5454.615ENSMPUG00000001531UPF3B9045.843Mustela_putorius_furo
ENSCAFG00020014268UPF3A8245.387ENSMLUG00000010821UPF3B8649.645Myotis_lucifugus
ENSCAFG00020014268UPF3A8577.184ENSMLUG00000015905UPF3A9877.184Myotis_lucifugus
ENSCAFG00020014268UPF3A9170.938ENSNGAG00000019314Upf3a10070.938Nannospalax_galili
ENSCAFG00020014268UPF3A9773.448ENSNLEG00000007563UPF3A9873.448Nomascus_leucogenys
ENSCAFG00020014268UPF3A5255.823ENSNLEG00000014897UPF3B7365.441Nomascus_leucogenys
ENSCAFG00020014268UPF3A8742.155ENSODEG00000002186-8943.925Octodon_degus
ENSCAFG00020014268UPF3A8044.472ENSOANG00000002594-9344.169Ornithorhynchus_anatinus
ENSCAFG00020014268UPF3A7765.027ENSOANG00000006985-9565.027Ornithorhynchus_anatinus
ENSCAFG00020014268UPF3A8561.687ENSOCUG00000008450UPF3A9658.471Oryctolagus_cuniculus
ENSCAFG00020014268UPF3A8241.463ENSORLG00000001026upf3b8942.891Oryzias_latipes
ENSCAFG00020014268UPF3A8555.663ENSORLG00000010911upf3a8556.829Oryzias_latipes
ENSCAFG00020014268UPF3A8554.988ENSORLG00020014317upf3a8953.580Oryzias_latipes_hni
ENSCAFG00020014268UPF3A8241.463ENSORLG00020003758upf3b8947.368Oryzias_latipes_hni
ENSCAFG00020014268UPF3A8241.463ENSORLG00015012954upf3b8942.891Oryzias_latipes_hsok
ENSCAFG00020014268UPF3A8555.474ENSORLG00015017339upf3a5352.052Oryzias_latipes_hsok
ENSCAFG00020014268UPF3A9155.102ENSOMEG00000014425upf3a8955.963Oryzias_melastigma
ENSCAFG00020014268UPF3A6848.024ENSOGAG00000004643-8944.690Otolemur_garnettii
ENSCAFG00020014268UPF3A5650.530ENSOGAG00000033003-9147.059Otolemur_garnettii
ENSCAFG00020014268UPF3A8376.190ENSOGAG00000004788UPF3A9676.190Otolemur_garnettii
ENSCAFG00020014268UPF3A8143.990ENSOARG00000007869-9141.985Ovis_aries
ENSCAFG00020014268UPF3A9671.739ENSOARG00000009004UPF3A9571.739Ovis_aries
ENSCAFG00020014268UPF3A5852.857ENSPPAG00000040390UPF3B6965.441Pan_paniscus
ENSCAFG00020014268UPF3A9772.747ENSPPAG00000042267UPF3A9872.747Pan_paniscus
ENSCAFG00020014268UPF3A9980.380ENSPPRG00000025062UPF3A9880.380Panthera_pardus
ENSCAFG00020014268UPF3A5256.627ENSPPRG00000023536UPF3B8845.238Panthera_pardus
ENSCAFG00020014268UPF3A5255.823ENSPTIG00000015264UPF3B8844.828Panthera_tigris_altaica
ENSCAFG00020014268UPF3A8362.312ENSPTRG00000041187-9657.277Pan_troglodytes
ENSCAFG00020014268UPF3A8859.005ENSPTRG00000051640-9559.005Pan_troglodytes
ENSCAFG00020014268UPF3A9773.605ENSPTRG00000006073UPF3A9873.605Pan_troglodytes
ENSCAFG00020014268UPF3A5852.857ENSPTRG00000022228UPF3B6965.441Pan_troglodytes
ENSCAFG00020014268UPF3A8360.804ENSPTRG00000041835-9657.277Pan_troglodytes
ENSCAFG00020014268UPF3A5255.823ENSPANG00000000900UPF3B8763.830Papio_anubis
ENSCAFG00020014268UPF3A9574.286ENSPANG00000004346UPF3A9574.286Papio_anubis
ENSCAFG00020014268UPF3A9650.932ENSPKIG00000004422upf3a9254.940Paramormyrops_kingsleyae
ENSCAFG00020014268UPF3A8445.921ENSPKIG00000019226upf3b7570.085Paramormyrops_kingsleyae
ENSCAFG00020014268UPF3A8470.500ENSPSIG00000007468UPF3A9870.500Pelodiscus_sinensis
ENSCAFG00020014268UPF3A9170.023ENSPEMG00000019968-10070.023Peromyscus_maniculatus_bairdii
ENSCAFG00020014268UPF3A5552.920ENSPEMG00000012352Upf3b8948.284Peromyscus_maniculatus_bairdii
ENSCAFG00020014268UPF3A7576.371ENSPCIG00000019590-9078.673Phascolarctos_cinereus
ENSCAFG00020014268UPF3A8445.755ENSPCIG00000028914UPF3B8945.390Phascolarctos_cinereus
ENSCAFG00020014268UPF3A8447.140ENSPFOG00000013222upf3a8459.314Poecilia_formosa
ENSCAFG00020014268UPF3A8458.578ENSPLAG00000011960upf3a8559.057Poecilia_latipinna
ENSCAFG00020014268UPF3A8447.666ENSPMEG00000000836upf3a8556.471Poecilia_mexicana
ENSCAFG00020014268UPF3A9773.820ENSPPYG00000005536UPF3A9873.820Pongo_abelii
ENSCAFG00020014268UPF3A6967.964ENSPCAG00000013124UPF3A6969.162Procavia_capensis
ENSCAFG00020014268UPF3A8245.658ENSPCOG00000021960UPF3B8849.312Propithecus_coquereli
ENSCAFG00020014268UPF3A9972.881ENSPVAG00000005656UPF3A9772.881Pteropus_vampyrus
ENSCAFG00020014268UPF3A8441.505ENSPNYG00000009846upf3b9345.266Pundamilia_nyererei
ENSCAFG00020014268UPF3A9654.176ENSPNAG00000019532upf3a9454.978Pygocentrus_nattereri
ENSCAFG00020014268UPF3A5255.172ENSRNOG00000039994Upf3b9147.758Rattus_norvegicus
ENSCAFG00020014268UPF3A8670.388ENSRNOG00000017397Upf3a9770.560Rattus_norvegicus
ENSCAFG00020014268UPF3A8572.794ENSRBIG00000034007UPF3A9272.902Rhinopithecus_bieti
ENSCAFG00020014268UPF3A5852.857ENSRROG00000041031UPF3B8763.830Rhinopithecus_roxellana
ENSCAFG00020014268UPF3A8373.804ENSRROG00000012212UPF3A8373.804Rhinopithecus_roxellana
ENSCAFG00020014268UPF3A8246.135ENSSBOG00000019740UPF3B8966.129Saimiri_boliviensis_boliviensis
ENSCAFG00020014268UPF3A9567.105ENSSBOG00000029989UPF3A9567.105Saimiri_boliviensis_boliviensis
ENSCAFG00020014268UPF3A8771.981ENSSHAG00000009895UPF3A9971.981Sarcophilus_harrisii
ENSCAFG00020014268UPF3A8247.087ENSSHAG00000008634UPF3B8746.572Sarcophilus_harrisii
ENSCAFG00020014268UPF3A8445.991ENSSFOG00015005614upf3b9143.560Scleropages_formosus
ENSCAFG00020014268UPF3A8352.580ENSSFOG00015021851upf3a9352.298Scleropages_formosus
ENSCAFG00020014268UPF3A5361.742ENSSMAG00000012913upf3b9147.796Scophthalmus_maximus
ENSCAFG00020014268UPF3A8165.544ENSSARG00000007262UPF3A9462.694Sorex_araneus
ENSCAFG00020014268UPF3A8544.366ENSSPUG00000013082UPF3B8745.735Sphenodon_punctatus
ENSCAFG00020014268UPF3A5162.598ENSSPAG00000009989upf3b9349.539Stegastes_partitus
ENSCAFG00020014268UPF3A8245.025ENSSSCG00000012617UPF3B8845.581Sus_scrofa
ENSCAFG00020014268UPF3A9972.899ENSSSCG00000024679UPF3A9572.899Sus_scrofa
ENSCAFG00020014268UPF3A8145.636ENSTGUG00000003413UPF3B9346.617Taeniopygia_guttata
ENSCAFG00020014268UPF3A8273.604ENSTGUG00000009493UPF3A10073.604Taeniopygia_guttata
ENSCAFG00020014268UPF3A9652.268ENSTRUG00000012730upf3a9252.516Takifugu_rubripes
ENSCAFG00020014268UPF3A8350.249ENSTNIG00000014973upf3a9950.860Tetraodon_nigroviridis
ENSCAFG00020014268UPF3A6563.259ENSTBEG00000017186-9863.259Tupaia_belangeri
ENSCAFG00020014268UPF3A9965.678ENSTTRG00000015414UPF3A9765.678Tursiops_truncatus
ENSCAFG00020014268UPF3A8245.185ENSUAMG00000024565UPF3B8944.471Ursus_americanus
ENSCAFG00020014268UPF3A8143.490ENSUMAG00000002150UPF3B8344.140Ursus_maritimus
ENSCAFG00020014268UPF3A8474.690ENSVPAG00000003525UPF3A9774.690Vicugna_pacos
ENSCAFG00020014268UPF3A8245.823ENSVVUG00000011594UPF3B8366.102Vulpes_vulpes
ENSCAFG00020014268UPF3A9994.292ENSVVUG00000013538UPF3A9694.292Vulpes_vulpes
ENSCAFG00020014268UPF3A8158.462ENSXETG00000002572upf3a9058.462Xenopus_tropicalis
ENSCAFG00020014268UPF3A8144.975ENSXETG00000007440upf3b7468.023Xenopus_tropicalis
ENSCAFG00020014268UPF3A8445.343ENSXMAG00000013452upf3a8458.809Xiphophorus_maculatus

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