EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020014377 (Gene tree)
Gene ID: 112654417
Gene Symbol: -
Alias: -
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 2014 bases
Position: chrQKWQ01001620.1:442552-444565
Accession: 112654417
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020017961	Exo_endo_phos	PF03372.23	1.3e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020020833	-	957	-	ENSCAFP00020017961	318 (aa)	XP_025294717	UPI00004A5A89

Gene Model

Click here to download ENSCAFG00020014377's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020014377's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020014377	-	54	100.000	ENSCAFG00020023002	-	96	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020014377	-	100	95.283	ENSG00000100823	APEX1	100	95.283	Homo_sapiens
ENSCAFG00020014377	-	88	69.892	ENSAPOG00000017002	apex1	91	69.892	Acanthochromis_polyacanthus
ENSCAFG00020014377	-	100	95.597	ENSAMEG00000005418	APEX1	100	95.597	Ailuropoda_melanoleuca
ENSCAFG00020014377	-	87	71.223	ENSACIG00000010653	apex1	94	71.326	Amphilophus_citrinellus
ENSCAFG00020014377	-	99	65.506	ENSAOCG00000009649	apex1	99	65.300	Amphiprion_ocellaris
ENSCAFG00020014377	-	99	65.506	ENSAPEG00000021453	apex1	99	65.300	Amphiprion_percula
ENSCAFG00020014377	-	99	68.038	ENSATEG00000002883	apex1	97	68.038	Anabas_testudineus
ENSCAFG00020014377	-	100	70.186	ENSACAG00000008099	APEX1	100	70.186	Anolis_carolinensis
ENSCAFG00020014377	-	100	95.912	ENSANAG00000030117	APEX1	100	95.912	Aotus_nancymaae
ENSCAFG00020014377	-	86	71.636	ENSACLG00000018441	apex1	99	66.456	Astatotilapia_calliptera
ENSCAFG00020014377	-	100	65.625	ENSAMXG00000034699	apex1	100	65.625	Astyanax_mexicanus
ENSCAFG00020014377	-	100	93.396	ENSBTAG00000002745	APEX1	100	93.396	Bos_taurus
ENSCAFG00020014377	-	80	44.922	WBGene00001372	exo-3	88	44.922	Caenorhabditis_elegans
ENSCAFG00020014377	-	100	96.541	ENSCJAG00000009726	APEX1	100	96.541	Callithrix_jacchus
ENSCAFG00020014377	-	100	100.000	ENSCAFG00000032033	APEX1	100	100.000	Canis_familiaris
ENSCAFG00020014377	-	98	74.359	ENSCHIG00000014537	-	99	74.359	Capra_hircus
ENSCAFG00020014377	-	100	93.396	ENSCHIG00000007298	-	100	93.396	Capra_hircus
ENSCAFG00020014377	-	100	93.711	ENSTSYG00000034813	APEX1	100	93.711	Carlito_syrichta
ENSCAFG00020014377	-	85	88.930	ENSCAPG00000016235	APEX1	91	97.458	Cavia_aperea
ENSCAFG00020014377	-	100	94.025	ENSCPOG00000030909	APEX1	100	94.025	Cavia_porcellus
ENSCAFG00020014377	-	100	83.019	ENSCCAG00000031931	-	100	83.019	Cebus_capucinus
ENSCAFG00020014377	-	100	96.541	ENSCCAG00000033056	-	100	96.541	Cebus_capucinus
ENSCAFG00020014377	-	100	94.654	ENSCATG00000015580	APEX1	100	94.654	Cercocebus_atys
ENSCAFG00020014377	-	100	94.025	ENSCLAG00000001002	APEX1	100	94.025	Chinchilla_lanigera
ENSCAFG00020014377	-	100	94.340	ENSCSAG00000016685	-	100	94.340	Chlorocebus_sabaeus
ENSCAFG00020014377	-	100	94.340	ENSCSAG00000016670	-	100	94.340	Chlorocebus_sabaeus
ENSCAFG00020014377	-	100	70.846	ENSCPBG00000009567	APEX1	100	70.846	Chrysemys_picta_bellii
ENSCAFG00020014377	-	93	53.465	ENSCING00000008137	-	83	58.779	Ciona_intestinalis
ENSCAFG00020014377	-	98	47.604	ENSCSAVG00000007144	-	100	52.510	Ciona_savignyi
ENSCAFG00020014377	-	100	94.969	ENSCANG00000030726	APEX1	100	94.969	Colobus_angolensis_palliatus
ENSCAFG00020014377	-	100	91.824	ENSCGRG00001017046	Apex1	100	91.824	Cricetulus_griseus_chok1gshd
ENSCAFG00020014377	-	100	91.824	ENSCGRG00000008984	Apex1	100	91.824	Cricetulus_griseus_crigri
ENSCAFG00020014377	-	99	65.094	ENSCSEG00000017499	apex1	99	64.465	Cynoglossus_semilaevis
ENSCAFG00020014377	-	88	71.685	ENSCVAG00000022075	apex1	99	66.456	Cyprinodon_variegatus
ENSCAFG00020014377	-	100	66.667	ENSDARG00000045843	apex1	100	65.109	Danio_rerio
ENSCAFG00020014377	-	100	89.308	ENSDNOG00000042234	APEX1	95	89.308	Dasypus_novemcinctus
ENSCAFG00020014377	-	100	94.025	ENSDORG00000001616	Apex1	100	94.025	Dipodomys_ordii
ENSCAFG00020014377	-	100	93.396	ENSETEG00000004855	-	100	93.396	Echinops_telfairi
ENSCAFG00020014377	-	75	64.854	ENSEBUG00000000622	-	92	64.854	Eptatretus_burgeri
ENSCAFG00020014377	-	100	96.226	ENSEASG00005017489	APEX1	74	96.226	Equus_asinus_asinus
ENSCAFG00020014377	-	100	96.226	ENSECAG00000022325	APEX1	82	96.226	Equus_caballus
ENSCAFG00020014377	-	91	93.750	ENSEEUG00000012569	APEX1	100	93.750	Erinaceus_europaeus
ENSCAFG00020014377	-	100	65.723	ENSELUG00000021706	apex1	100	66.562	Esox_lucius
ENSCAFG00020014377	-	100	95.912	ENSFCAG00000030869	APEX1	100	95.912	Felis_catus
ENSCAFG00020014377	-	100	93.082	ENSFDAG00000006120	APEX1	100	93.082	Fukomys_damarensis
ENSCAFG00020014377	-	99	67.722	ENSFHEG00000009031	apex1	83	67.722	Fundulus_heteroclitus
ENSCAFG00020014377	-	99	62.975	ENSGMOG00000007943	apex1	99	62.975	Gadus_morhua
ENSCAFG00020014377	-	88	72.401	ENSGAFG00000005311	apex1	99	67.405	Gambusia_affinis
ENSCAFG00020014377	-	99	66.246	ENSGACG00000019497	apex1	99	69.549	Gasterosteus_aculeatus
ENSCAFG00020014377	-	100	70.533	ENSGAGG00000014999	APEX1	100	70.533	Gopherus_agassizii
ENSCAFG00020014377	-	100	95.283	ENSGGOG00000002128	APEX1	100	95.283	Gorilla_gorilla
ENSCAFG00020014377	-	99	66.456	ENSHBUG00000005894	apex1	99	66.772	Haplochromis_burtoni
ENSCAFG00020014377	-	100	94.025	ENSHGLG00000002848	APEX1	100	94.025	Heterocephalus_glaber_female
ENSCAFG00020014377	-	100	94.025	ENSHGLG00100017878	APEX1	100	94.025	Heterocephalus_glaber_male
ENSCAFG00020014377	-	99	66.771	ENSHCOG00000009961	apex1	99	67.089	Hippocampus_comes
ENSCAFG00020014377	-	100	67.398	ENSIPUG00000005799	apex1	100	67.085	Ictalurus_punctatus
ENSCAFG00020014377	-	100	94.025	ENSSTOG00000010096	APEX1	100	94.025	Ictidomys_tridecemlineatus
ENSCAFG00020014377	-	100	93.082	ENSJJAG00000012067	-	100	93.082	Jaculus_jaculus
ENSCAFG00020014377	-	100	83.648	ENSJJAG00000003660	-	100	83.648	Jaculus_jaculus
ENSCAFG00020014377	-	94	84.899	ENSJJAG00000020465	-	96	84.899	Jaculus_jaculus
ENSCAFG00020014377	-	99	66.139	ENSKMAG00000021171	apex1	99	66.139	Kryptolebias_marmoratus
ENSCAFG00020014377	-	99	64.669	ENSLBEG00000010248	apex1	99	64.669	Labrus_bergylta
ENSCAFG00020014377	-	100	67.188	ENSLACG00000008617	APEX1	100	65.938	Latimeria_chalumnae
ENSCAFG00020014377	-	100	67.391	ENSLOCG00000015516	apex1	99	67.391	Lepisosteus_oculatus
ENSCAFG00020014377	-	100	93.396	ENSLAFG00000021872	APEX1	100	93.396	Loxodonta_africana
ENSCAFG00020014377	-	100	94.340	ENSMFAG00000002565	APEX1	100	94.340	Macaca_fascicularis
ENSCAFG00020014377	-	100	94.340	ENSMMUG00000048039	APEX1	100	94.340	Macaca_mulatta
ENSCAFG00020014377	-	100	94.340	ENSMNEG00000036944	APEX1	100	94.340	Macaca_nemestrina
ENSCAFG00020014377	-	100	94.654	ENSMLEG00000042125	APEX1	100	94.654	Mandrillus_leucophaeus
ENSCAFG00020014377	-	99	67.192	ENSMAMG00000023526	apex1	99	67.192	Mastacembelus_armatus
ENSCAFG00020014377	-	86	71.636	ENSMZEG00005014187	apex1	99	66.456	Maylandia_zebra
ENSCAFG00020014377	-	100	92.453	ENSMAUG00000013994	Apex1	100	92.453	Mesocricetus_auratus
ENSCAFG00020014377	-	100	95.283	ENSMICG00000043554	APEX1	100	95.283	Microcebus_murinus
ENSCAFG00020014377	-	100	93.082	ENSMOCG00000013721	Apex1	100	93.082	Microtus_ochrogaster
ENSCAFG00020014377	-	99	63.950	ENSMMOG00000010031	apex1	97	63.009	Mola_mola
ENSCAFG00020014377	-	100	84.062	ENSMODG00000007125	APEX1	100	83.642	Monodelphis_domestica
ENSCAFG00020014377	-	88	64.158	ENSMALG00000011699	apex1	75	64.158	Monopterus_albus
ENSCAFG00020014377	-	99	94.953	MGP_CAROLIEiJ_G0019209	Apex1	99	94.953	Mus_caroli
ENSCAFG00020014377	-	100	95.597	ENSMUSG00000035960	Apex1	100	95.597	Mus_musculus
ENSCAFG00020014377	-	100	95.597	MGP_PahariEiJ_G0030232	Apex1	100	95.597	Mus_pahari
ENSCAFG00020014377	-	100	95.597	MGP_SPRETEiJ_G0020101	Apex1	100	95.597	Mus_spretus
ENSCAFG00020014377	-	100	94.062	ENSMLUG00000028957	APEX1	100	94.062	Myotis_lucifugus
ENSCAFG00020014377	-	100	70.440	ENSNGAG00000021748	-	99	70.440	Nannospalax_galili
ENSCAFG00020014377	-	100	93.711	ENSNGAG00000002725	-	100	93.711	Nannospalax_galili
ENSCAFG00020014377	-	86	71.273	ENSNBRG00000005334	apex1	91	66.139	Neolamprologus_brichardi
ENSCAFG00020014377	-	100	94.969	ENSNLEG00000010839	APEX1	100	94.969	Nomascus_leucogenys
ENSCAFG00020014377	-	100	86.478	ENSMEUG00000014519	APEX1	100	85.266	Notamacropus_eugenii
ENSCAFG00020014377	-	100	93.396	ENSOPRG00000014029	APEX1	100	93.082	Ochotona_princeps
ENSCAFG00020014377	-	97	75.405	ENSODEG00000004777	-	99	75.405	Octodon_degus
ENSCAFG00020014377	-	100	70.988	ENSODEG00000006583	-	100	70.988	Octodon_degus
ENSCAFG00020014377	-	100	94.340	ENSODEG00000001703	-	100	94.340	Octodon_degus
ENSCAFG00020014377	-	87	71.583	ENSONIG00000012089	apex1	99	66.772	Oreochromis_niloticus
ENSCAFG00020014377	-	90	82.807	ENSOANG00000008836	APEX1	80	79.012	Ornithorhynchus_anatinus
ENSCAFG00020014377	-	100	95.283	ENSOCUG00000005022	APEX1	100	95.283	Oryctolagus_cuniculus
ENSCAFG00020014377	-	99	67.925	ENSORLG00000012378	apex1	99	67.925	Oryzias_latipes
ENSCAFG00020014377	-	99	67.925	ENSORLG00020021371	apex1	99	67.925	Oryzias_latipes_hni
ENSCAFG00020014377	-	99	67.925	ENSORLG00015020089	apex1	99	67.925	Oryzias_latipes_hsok
ENSCAFG00020014377	-	99	66.981	ENSOMEG00000018876	apex1	99	66.981	Oryzias_melastigma
ENSCAFG00020014377	-	100	94.340	ENSOGAG00000013335	-	100	94.340	Otolemur_garnettii
ENSCAFG00020014377	-	98	83.974	ENSOGAG00000029355	-	100	83.974	Otolemur_garnettii
ENSCAFG00020014377	-	100	92.453	ENSOARG00000019740	-	100	92.453	Ovis_aries
ENSCAFG00020014377	-	97	88.961	ENSOARG00000001876	-	100	88.961	Ovis_aries
ENSCAFG00020014377	-	99	78.165	ENSOARG00000014424	-	100	78.165	Ovis_aries
ENSCAFG00020014377	-	100	95.597	ENSPPAG00000038760	APEX1	100	95.597	Pan_paniscus
ENSCAFG00020014377	-	100	96.226	ENSPPRG00000011794	APEX1	100	96.226	Panthera_pardus
ENSCAFG00020014377	-	100	95.912	ENSPTIG00000014829	APEX1	100	95.912	Panthera_tigris_altaica
ENSCAFG00020014377	-	100	95.597	ENSPTRG00000006093	APEX1	100	95.597	Pan_troglodytes
ENSCAFG00020014377	-	100	94.654	ENSPANG00000022757	APEX1	100	94.654	Papio_anubis
ENSCAFG00020014377	-	87	69.675	ENSPKIG00000003504	apex1	100	66.149	Paramormyrops_kingsleyae
ENSCAFG00020014377	-	76	67.078	ENSPMGG00000016596	apex1	73	67.078	Periophthalmus_magnuspinnatus
ENSCAFG00020014377	-	100	94.654	ENSPEMG00000019097	Apex1	100	94.654	Peromyscus_maniculatus_bairdii
ENSCAFG00020014377	-	94	66.333	ENSPMAG00000007275	-	95	68.683	Petromyzon_marinus
ENSCAFG00020014377	-	100	84.013	ENSPCIG00000023274	APEX1	100	84.639	Phascolarctos_cinereus
ENSCAFG00020014377	-	88	72.760	ENSPFOG00000004178	apex1	99	67.405	Poecilia_formosa
ENSCAFG00020014377	-	88	72.401	ENSPLAG00000012779	apex1	99	67.823	Poecilia_latipinna
ENSCAFG00020014377	-	88	72.760	ENSPMEG00000019623	apex1	99	67.405	Poecilia_mexicana
ENSCAFG00020014377	-	88	72.043	ENSPREG00000014298	apex1	99	66.772	Poecilia_reticulata
ENSCAFG00020014377	-	100	94.654	ENSPPYG00000005565	APEX1	100	94.654	Pongo_abelii
ENSCAFG00020014377	-	100	91.195	ENSPCAG00000010376	APEX1	100	91.195	Procavia_capensis
ENSCAFG00020014377	-	100	95.283	ENSPCOG00000021564	APEX1	100	95.283	Propithecus_coquereli
ENSCAFG00020014377	-	100	94.688	ENSPVAG00000010736	APEX1	100	94.688	Pteropus_vampyrus
ENSCAFG00020014377	-	86	71.636	ENSPNYG00000023940	apex1	99	66.456	Pundamilia_nyererei
ENSCAFG00020014377	-	93	65.203	ENSPNAG00000020897	apex1	96	65.085	Pygocentrus_nattereri
ENSCAFG00020014377	-	100	94.654	ENSRNOG00000009663	Apex1	100	94.654	Rattus_norvegicus
ENSCAFG00020014377	-	100	94.654	ENSRBIG00000038325	APEX1	99	94.654	Rhinopithecus_bieti
ENSCAFG00020014377	-	100	81.761	ENSSBOG00000031372	-	100	79.874	Saimiri_boliviensis_boliviensis
ENSCAFG00020014377	-	100	96.226	ENSSBOG00000018921	-	100	96.226	Saimiri_boliviensis_boliviensis
ENSCAFG00020014377	-	100	83.025	ENSSHAG00000013524	APEX1	100	83.025	Sarcophilus_harrisii
ENSCAFG00020014377	-	100	63.208	ENSSFOG00015001948	apex1	100	63.208	Scleropages_formosus
ENSCAFG00020014377	-	87	69.424	ENSSMAG00000013348	apex1	99	64.873	Scophthalmus_maximus
ENSCAFG00020014377	-	99	65.615	ENSSDUG00000016377	apex1	99	65.506	Seriola_dumerili
ENSCAFG00020014377	-	99	66.246	ENSSLDG00000023005	apex1	99	66.139	Seriola_lalandi_dorsalis
ENSCAFG00020014377	-	90	73.333	ENSSPUG00000000531	APEX1	95	73.239	Sphenodon_punctatus
ENSCAFG00020014377	-	99	65.823	ENSSPAG00000000458	apex1	99	65.823	Stegastes_partitus
ENSCAFG00020014377	-	100	95.283	ENSSSCG00000040060	-	100	95.283	Sus_scrofa
ENSCAFG00020014377	-	93	59.603	ENSSSCG00000039705	-	92	60.211	Sus_scrofa
ENSCAFG00020014377	-	74	60.593	ENSTGUG00000014378	APEX1	100	60.593	Taeniopygia_guttata
ENSCAFG00020014377	-	87	67.626	ENSTRUG00000004268	apex1	95	63.608	Takifugu_rubripes
ENSCAFG00020014377	-	99	64.241	ENSTNIG00000005778	apex1	99	63.608	Tetraodon_nigroviridis
ENSCAFG00020014377	-	100	91.509	ENSTBEG00000006405	APEX1	100	91.509	Tupaia_belangeri
ENSCAFG00020014377	-	74	95.763	ENSTTRG00000007860	APEX1	100	95.763	Tursiops_truncatus
ENSCAFG00020014377	-	100	95.912	ENSUAMG00000010457	APEX1	100	95.912	Ursus_americanus
ENSCAFG00020014377	-	100	95.912	ENSUMAG00000009178	APEX1	100	95.912	Ursus_maritimus
ENSCAFG00020014377	-	74	91.102	ENSVPAG00000005083	APEX1	100	91.102	Vicugna_pacos
ENSCAFG00020014377	-	100	99.371	ENSVVUG00000009010	APEX1	100	99.371	Vulpes_vulpes
ENSCAFG00020014377	-	100	65.831	ENSXETG00000024773	apex1	100	65.831	Xenopus_tropicalis
ENSCAFG00020014377	-	99	68.038	ENSXCOG00000015233	apex1	99	68.038	Xiphophorus_couchianus
ENSCAFG00020014377	-	100	67.296	ENSXMAG00000006195	apex1	99	68.038	Xiphophorus_maculatus