EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCAFG00020014752 (Gene tree)
Gene ID
112664333
Gene Symbol
POLR1A
Alias
DKFZP586M0122|FLJ21915|RPA1|RPO1-4
Full Name
RNA polymerase I subunit A
Gene Type
protein_coding
Species
Canis_lupus_dingo
Status
putative
Strand
Minus strand
Length
70276 bases
Position
chrQKWQ01001382.1:25166529-25236804
Accession
17264
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAFP00020019911RNA_pol_Rpb1_5PF04998.178.3e-10411
ENSCAFP00020019870RNA_pol_Rpb1_5PF04998.178.7e-10411
ENSCAFP00020019832RNA_pol_Rpb1_5PF04998.179.1e-10411
ENSCAFP00020019813RNA_pol_Rpb1_5PF04998.179.7e-10411
ENSCAFP00020019805RNA_pol_Rpb1_5PF04998.179.7e-10411
ENSCAFP00020019919RNA_pol_Rpb1_4PF05000.172.2e-2511
ENSCAFP00020019813RNA_pol_Rpb1_4PF05000.172.6e-2511
ENSCAFP00020019805RNA_pol_Rpb1_4PF05000.172.6e-2511
ENSCAFP00020019832RNA_pol_Rpb1_4PF05000.172.7e-2511
ENSCAFP00020019870RNA_pol_Rpb1_4PF05000.173e-2511
ENSCAFP00020019911RNA_pol_Rpb1_4PF05000.173.3e-2511
ENSCAFP00020019919RNA_pol_Rpb1_2PF00623.202.7e-7011
ENSCAFP00020019870RNA_pol_Rpb1_2PF00623.203.4e-7011
ENSCAFP00020019911RNA_pol_Rpb1_2PF00623.203.5e-7011
ENSCAFP00020019832RNA_pol_Rpb1_2PF00623.205.4e-7011
ENSCAFP00020019805RNA_pol_Rpb1_2PF00623.205.9e-7011
ENSCAFP00020019813RNA_pol_Rpb1_2PF00623.206.1e-7011
ENSCAFP00020019919RNA_pol_Rpb1_3PF04983.187.2e-3711
ENSCAFP00020019911RNA_pol_Rpb1_3PF04983.181.2e-3611
ENSCAFP00020019870RNA_pol_Rpb1_3PF04983.181.2e-3611
ENSCAFP00020019813RNA_pol_Rpb1_3PF04983.181.3e-3611
ENSCAFP00020019805RNA_pol_Rpb1_3PF04983.181.3e-3611
ENSCAFP00020019832RNA_pol_Rpb1_3PF04983.181.3e-3611
ENSCAFP00020019870RNA_pol_Rpb1_1PF04997.121.4e-2211
ENSCAFP00020019911RNA_pol_Rpb1_1PF04997.127.7e-2211
ENSCAFP00020019813RNA_pol_Rpb1_1PF04997.121.3e-2111
ENSCAFP00020019805RNA_pol_Rpb1_1PF04997.121.5e-2111
ENSCAFP00020019832RNA_pol_Rpb1_1PF04997.124.1e-2111
ENSCAFP00020019919RNA_pol_Rpb1_1PF04997.121.2e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAFT00020023052POLR1A-2062970-ENSCAFP00020019919989 (aa)--
ENSCAFT00020023043POLR1A-2054938-ENSCAFP000200199111645 (aa)--
ENSCAFT00020022925POLR1A-2015169-ENSCAFP000200198051722 (aa)--
ENSCAFT00020022936POLR1A-2025166-ENSCAFP000200198131721 (aa)--
ENSCAFT00020022999POLR1A-2044947-ENSCAFP000200198701648 (aa)--
ENSCAFT00020022957POLR1A-2035139-ENSCAFP000200198321712 (aa)--
Gene Model
Click here to download ENSCAFG00020014752's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020014752's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCAFG00020014752POLR1A8137.143ENSCAFG00020007929-6637.143
ENSCAFG00020014752POLR1A8631.548ENSCAFG00020014711POLR3A9131.548
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAFG00020014752POLR1A10090.382ENSG00000068654POLR1A10090.451Homo_sapiens
ENSCAFG00020014752POLR1A9569.483ENSAPOG00000017945polr1a9967.918Acanthochromis_polyacanthus
ENSCAFG00020014752POLR1A10095.647ENSAMEG00000005807POLR1A10096.311Ailuropoda_melanoleuca
ENSCAFG00020014752POLR1A10064.994ENSACIG00000022147polr1a9772.917Amphilophus_citrinellus
ENSCAFG00020014752POLR1A10066.157ENSAOCG00000017336polr1a10068.816Amphiprion_ocellaris
ENSCAFG00020014752POLR1A9473.611ENSAPEG00000016105polr1a9873.611Amphiprion_percula
ENSCAFG00020014752POLR1A10066.859ENSATEG00000016773polr1a10066.765Anabas_testudineus
ENSCAFG00020014752POLR1A8771.866ENSAPLG00000013871POLR1A9973.012Anas_platyrhynchos
ENSCAFG00020014752POLR1A9969.769ENSACAG00000012141POLR1A9969.422Anolis_carolinensis
ENSCAFG00020014752POLR1A10089.507ENSANAG00000033927POLR1A10089.913Aotus_nancymaae
ENSCAFG00020014752POLR1A9372.222ENSACLG00000020541polr1a10063.919Astatotilapia_calliptera
ENSCAFG00020014752POLR1A10090.888ENSBTAG00000006481POLR1A10090.888Bos_taurus
ENSCAFG00020014752POLR1A9840.815WBGene00012999rpoa-19838.111Caenorhabditis_elegans
ENSCAFG00020014752POLR1A10089.224ENSCJAG00000019547POLR1A10089.397Callithrix_jacchus
ENSCAFG00020014752POLR1A10099.652ENSCAFG00000007613POLR1A10099.652Canis_familiaris
ENSCAFG00020014752POLR1A10089.675ENSCHIG00000018204POLR1A10089.211Capra_hircus
ENSCAFG00020014752POLR1A10088.747ENSTSYG00000002761POLR1A10088.747Carlito_syrichta
ENSCAFG00020014752POLR1A9390.022ENSCAPG00000010132POLR1A10084.896Cavia_aperea
ENSCAFG00020014752POLR1A10089.605ENSCPOG00000012350POLR1A10089.605Cavia_porcellus
ENSCAFG00020014752POLR1A10089.629ENSCCAG00000019839POLR1A10089.525Cebus_capucinus
ENSCAFG00020014752POLR1A10090.788ENSCATG00000029786POLR1A10090.856Cercocebus_atys
ENSCAFG00020014752POLR1A10089.611ENSCLAG00000005187POLR1A10089.437Chinchilla_lanigera
ENSCAFG00020014752POLR1A10090.667ENSCSAG00000016251POLR1A10090.677Chlorocebus_sabaeus
ENSCAFG00020014752POLR1A7995.105ENSCHOG00000003766-8495.882Choloepus_hoffmanni
ENSCAFG00020014752POLR1A9975.421ENSCPBG00000001115POLR1A9974.956Chrysemys_picta_bellii
ENSCAFG00020014752POLR1A9255.945ENSCSAVG00000007184-9255.486Ciona_savignyi
ENSCAFG00020014752POLR1A10087.840ENSCANG00000031785POLR1A10087.392Colobus_angolensis_palliatus
ENSCAFG00020014752POLR1A10083.585ENSCGRG00001006651Polr1a10083.585Cricetulus_griseus_chok1gshd
ENSCAFG00020014752POLR1A6087.003ENSCGRG00000010834Polr1a10087.003Cricetulus_griseus_crigri
ENSCAFG00020014752POLR1A10062.635ENSCSEG00000020190polr1a10062.740Cynoglossus_semilaevis
ENSCAFG00020014752POLR1A9569.937ENSCVAG00000020941polr1a10064.643Cyprinodon_variegatus
ENSCAFG00020014752POLR1A10067.284ENSDARG00000098375polr1a10066.529Danio_rerio
ENSCAFG00020014752POLR1A9588.229ENSDNOG00000010829POLR1A10083.082Dasypus_novemcinctus
ENSCAFG00020014752POLR1A10088.324ENSDORG00000008298Polr1a10088.324Dipodomys_ordii
ENSCAFG00020014752POLR1A9943.481FBgn0019938RpI19943.709Drosophila_melanogaster
ENSCAFG00020014752POLR1A8488.224ENSETEG00000000412-72100.000Echinops_telfairi
ENSCAFG00020014752POLR1A8867.442ENSEBUG00000005667-9367.442Eptatretus_burgeri
ENSCAFG00020014752POLR1A10093.101ENSEASG00005001625POLR1A10093.275Equus_asinus_asinus
ENSCAFG00020014752POLR1A10093.101ENSECAG00000010092POLR1A10094.933Equus_caballus
ENSCAFG00020014752POLR1A10093.101ENSECAG00000036306-10094.933Equus_caballus
ENSCAFG00020014752POLR1A10093.101ENSECAG00000030510-10094.933Equus_caballus
ENSCAFG00020014752POLR1A8595.745ENSEEUG00000000676POLR1A8595.556Erinaceus_europaeus
ENSCAFG00020014752POLR1A10067.072ENSELUG00000012769polr1a9966.017Esox_lucius
ENSCAFG00020014752POLR1A10094.893ENSFCAG00000008966POLR1A10094.893Felis_catus
ENSCAFG00020014752POLR1A9971.496ENSFALG00000010082POLR1A9971.496Ficedula_albicollis
ENSCAFG00020014752POLR1A10089.437ENSFDAG00000013726POLR1A10089.379Fukomys_damarensis
ENSCAFG00020014752POLR1A10063.199ENSFHEG00000005996polr1a10063.227Fundulus_heteroclitus
ENSCAFG00020014752POLR1A10061.538ENSGMOG00000002230polr1a10060.846Gadus_morhua
ENSCAFG00020014752POLR1A9576.034ENSGALG00000038160-9970.097Gallus_gallus
ENSCAFG00020014752POLR1A10065.929ENSGAFG00000015266polr1a10065.929Gambusia_affinis
ENSCAFG00020014752POLR1A9570.053ENSGACG00000018791polr1a10064.642Gasterosteus_aculeatus
ENSCAFG00020014752POLR1A9075.887ENSGAGG00000004984-9681.589Gopherus_agassizii
ENSCAFG00020014752POLR1A10090.324ENSGGOG00000001788POLR1A10090.394Gorilla_gorilla
ENSCAFG00020014752POLR1A9566.348ENSHBUG00000020021polr1a9572.222Haplochromis_burtoni
ENSCAFG00020014752POLR1A10089.954ENSHGLG00000006334POLR1A10089.954Heterocephalus_glaber_female
ENSCAFG00020014752POLR1A10089.693ENSHGLG00100006614POLR1A10089.693Heterocephalus_glaber_male
ENSCAFG00020014752POLR1A10063.935ENSHCOG00000003345polr1a9569.444Hippocampus_comes
ENSCAFG00020014752POLR1A10065.941ENSIPUG00000013174polr1a10066.059Ictalurus_punctatus
ENSCAFG00020014752POLR1A10086.992ENSSTOG00000012580POLR1A10087.348Ictidomys_tridecemlineatus
ENSCAFG00020014752POLR1A10088.058ENSJJAG00000013113Polr1a10088.058Jaculus_jaculus
ENSCAFG00020014752POLR1A10065.662ENSKMAG00000007399polr1a10065.603Kryptolebias_marmoratus
ENSCAFG00020014752POLR1A10064.741ENSLBEG00000015401polr1a9967.992Labrus_bergylta
ENSCAFG00020014752POLR1A9077.095ENSLACG00000003218polr1a10076.714Latimeria_chalumnae
ENSCAFG00020014752POLR1A10070.908ENSLOCG00000010881polr1a10070.653Lepisosteus_oculatus
ENSCAFG00020014752POLR1A10089.751ENSLAFG00000014948POLR1A10089.913Loxodonta_africana
ENSCAFG00020014752POLR1A10090.672ENSMFAG00000046097POLR1A10090.799Macaca_fascicularis
ENSCAFG00020014752POLR1A10090.556ENSMMUG00000015815POLR1A10090.683Macaca_mulatta
ENSCAFG00020014752POLR1A10090.672ENSMNEG00000043313POLR1A10090.799Macaca_nemestrina
ENSCAFG00020014752POLR1A10090.093ENSMLEG00000042428POLR1A10090.220Mandrillus_leucophaeus
ENSCAFG00020014752POLR1A10066.509ENSMAMG00000016565polr1a10066.390Mastacembelus_armatus
ENSCAFG00020014752POLR1A10066.088ENSMZEG00005004915polr1a10066.529Maylandia_zebra
ENSCAFG00020014752POLR1A9575.873ENSMGAG00000013111POLR1A9969.378Meleagris_gallopavo
ENSCAFG00020014752POLR1A9287.848ENSMAUG00000008497Polr1a10087.658Mesocricetus_auratus
ENSCAFG00020014752POLR1A10091.367ENSMICG00000000757POLR1A10091.309Microcebus_murinus
ENSCAFG00020014752POLR1A10088.109ENSMOCG00000000122Polr1a10087.935Microtus_ochrogaster
ENSCAFG00020014752POLR1A10065.458ENSMMOG00000010216polr1a10065.458Mola_mola
ENSCAFG00020014752POLR1A9582.049ENSMODG00000009335POLR1A10074.670Monodelphis_domestica
ENSCAFG00020014752POLR1A10066.010ENSMALG00000013363polr1a10065.962Monopterus_albus
ENSCAFG00020014752POLR1A10086.195MGP_CAROLIEiJ_G0028494Polr1a10085.963Mus_caroli
ENSCAFG00020014752POLR1A10086.253ENSMUSG00000049553Polr1a10086.079Mus_musculus
ENSCAFG00020014752POLR1A10087.072MGP_PahariEiJ_G0022230Polr1a10086.899Mus_pahari
ENSCAFG00020014752POLR1A10085.071MGP_SPRETEiJ_G0029499Polr1a10085.257Mus_spretus
ENSCAFG00020014752POLR1A10095.299ENSMPUG00000009135POLR1A10095.299Mustela_putorius_furo
ENSCAFG00020014752POLR1A10090.677ENSMLUG00000015723POLR1A10090.677Myotis_lucifugus
ENSCAFG00020014752POLR1A10088.290ENSNGAG00000017907Polr1a10088.116Nannospalax_galili
ENSCAFG00020014752POLR1A10066.352ENSNBRG00000000519polr1a10066.706Neolamprologus_brichardi
ENSCAFG00020014752POLR1A10088.524ENSNLEG00000002264POLR1A10088.422Nomascus_leucogenys
ENSCAFG00020014752POLR1A7693.701ENSMEUG00000011665-7693.701Notamacropus_eugenii
ENSCAFG00020014752POLR1A9595.745ENSOPRG00000008269POLR1A9795.556Ochotona_princeps
ENSCAFG00020014752POLR1A10089.089ENSODEG00000003542POLR1A10089.379Octodon_degus
ENSCAFG00020014752POLR1A10066.609ENSONIG00000015895polr1a10066.609Oreochromis_niloticus
ENSCAFG00020014752POLR1A7369.619ENSOANG00000012384-10069.755Ornithorhynchus_anatinus
ENSCAFG00020014752POLR1A10090.203ENSOCUG00000010138POLR1A10090.145Oryctolagus_cuniculus
ENSCAFG00020014752POLR1A10064.495ENSORLG00000008753polr1a9964.588Oryzias_latipes
ENSCAFG00020014752POLR1A10064.128ENSORLG00020020726polr1a9964.107Oryzias_latipes_hni
ENSCAFG00020014752POLR1A9675.532ENSORLG00015016071polr1a9975.556Oryzias_latipes_hsok
ENSCAFG00020014752POLR1A10089.913ENSOGAG00000004031POLR1A10089.913Otolemur_garnettii
ENSCAFG00020014752POLR1A10090.620ENSOARG00000020601POLR1A10090.620Ovis_aries
ENSCAFG00020014752POLR1A10090.324ENSPPAG00000042450POLR1A10090.394Pan_paniscus
ENSCAFG00020014752POLR1A10095.067ENSPPRG00000006702POLR1A10095.067Panthera_pardus
ENSCAFG00020014752POLR1A10094.505ENSPTIG00000018783POLR1A10094.505Panthera_tigris_altaica
ENSCAFG00020014752POLR1A10089.873ENSPTRG00000012147POLR1A10090.451Pan_troglodytes
ENSCAFG00020014752POLR1A10090.672ENSPANG00000025908POLR1A10090.741Papio_anubis
ENSCAFG00020014752POLR1A9476.389ENSPKIG00000005468polr1a9976.389Paramormyrops_kingsleyae
ENSCAFG00020014752POLR1A6572.481ENSPSIG00000009321-9972.481Pelodiscus_sinensis
ENSCAFG00020014752POLR1A9667.542ENSPMGG00000009718polr1a9570.759Periophthalmus_magnuspinnatus
ENSCAFG00020014752POLR1A10088.341ENSPEMG00000022224Polr1a10088.341Peromyscus_maniculatus_bairdii
ENSCAFG00020014752POLR1A9583.474ENSPCIG00000004222POLR1A9979.245Phascolarctos_cinereus
ENSCAFG00020014752POLR1A10064.471ENSPFOG00000005025polr1a10064.412Poecilia_formosa
ENSCAFG00020014752POLR1A10064.716ENSPLAG00000021389polr1a10064.858Poecilia_latipinna
ENSCAFG00020014752POLR1A10063.208ENSPMEG00000006463polr1a10063.406Poecilia_mexicana
ENSCAFG00020014752POLR1A10064.951ENSPREG00000002389polr1a10064.821Poecilia_reticulata
ENSCAFG00020014752POLR1A10089.745ENSPPYG00000012217POLR1A10089.803Pongo_abelii
ENSCAFG00020014752POLR1A92100.000ENSPCAG00000011582POLR1A92100.000Procavia_capensis
ENSCAFG00020014752POLR1A10090.788ENSPCOG00000026987POLR1A10090.788Propithecus_coquereli
ENSCAFG00020014752POLR1A9590.614ENSPVAG00000012674POLR1A9590.278Pteropus_vampyrus
ENSCAFG00020014752POLR1A10066.088ENSPNYG00000000026polr1a9872.222Pundamilia_nyererei
ENSCAFG00020014752POLR1A10066.763ENSPNAG00000019223polr1a9969.046Pygocentrus_nattereri
ENSCAFG00020014752POLR1A10087.935ENSRNOG00000009545Polr1a10087.761Rattus_norvegicus
ENSCAFG00020014752POLR1A10090.029ENSRBIG00000028335POLR1A10090.214Rhinopithecus_bieti
ENSCAFG00020014752POLR1A10089.971ENSRROG00000031473POLR1A10090.156Rhinopithecus_roxellana
ENSCAFG00020014752POLR1A9447.692YOR341WRPA1909047.692Saccharomyces_cerevisiae
ENSCAFG00020014752POLR1A10088.934ENSSBOG00000030262POLR1A10089.108Saimiri_boliviensis_boliviensis
ENSCAFG00020014752POLR1A10073.484ENSSHAG00000014739POLR1A10073.657Sarcophilus_harrisii
ENSCAFG00020014752POLR1A9573.171ENSSFOG00015019716polr1a10067.886Scleropages_formosus
ENSCAFG00020014752POLR1A10066.529ENSSMAG00000014342polr1a9771.034Scophthalmus_maximus
ENSCAFG00020014752POLR1A10067.129ENSSDUG00000014631polr1a10067.118Seriola_dumerili
ENSCAFG00020014752POLR1A10065.830ENSSLDG00000024095polr1a9771.528Seriola_lalandi_dorsalis
ENSCAFG00020014752POLR1A7597.872ENSSARG00000003136-7697.872Sorex_araneus
ENSCAFG00020014752POLR1A9579.167ENSSPUG00000004215POLR1A9878.974Sphenodon_punctatus
ENSCAFG00020014752POLR1A9766.183ENSSPAG00000016341polr1a9472.676Stegastes_partitus
ENSCAFG00020014752POLR1A9593.001ENSSSCG00000008226POLR1A9992.567Sus_scrofa
ENSCAFG00020014752POLR1A9574.894ENSTGUG00000010704POLR1A10070.253Taeniopygia_guttata
ENSCAFG00020014752POLR1A10064.699ENSTRUG00000002210polr1a9964.542Takifugu_rubripes
ENSCAFG00020014752POLR1A10059.988ENSTNIG00000010116polr1a10059.988Tetraodon_nigroviridis
ENSCAFG00020014752POLR1A7496.460ENSTBEG00000008646POLR1A7496.460Tupaia_belangeri
ENSCAFG00020014752POLR1A10087.464ENSTTRG00000008597POLR1A10087.870Tursiops_truncatus
ENSCAFG00020014752POLR1A7195.347ENSUAMG00000012158-9496.952Ursus_americanus
ENSCAFG00020014752POLR1A10095.473ENSUMAG00000006700POLR1A10095.473Ursus_maritimus
ENSCAFG00020014752POLR1A10099.071ENSVVUG00000001245POLR1A10099.071Vulpes_vulpes
ENSCAFG00020014752POLR1A10068.303ENSXETG00000001952polr1a10069.629Xenopus_tropicalis
ENSCAFG00020014752POLR1A7074.406ENSXCOG00000013384polr1a9275.092Xiphophorus_couchianus
ENSCAFG00020014752POLR1A10065.097ENSXMAG00000004032polr1a10065.097Xiphophorus_maculatus

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