EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020015288 (Gene tree)
Gene ID: 112677164
Gene Symbol: RC3H2
Alias: FLJ20301|FLJ20713|MNAB|RNF164
Full Name: ring finger and CCCH-type domains 2
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 39234 bases
Position: chrQKWQ01001968.1:1149005-1188238
Accession: 112677164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020019288	zf-CCCH	PF00642.24	5.4e-07	1	1
ENSCAFP00020019285	zf-CCCH	PF00642.24	5.5e-07	1	1
ENSCAFP00020019282	zf-CCCH	PF00642.24	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020022322	RC3H2-202	1437	-	ENSCAFP00020019285	478 (aa)	-	-
ENSCAFT00020022319	RC3H2-201	3570	XM_025475046	ENSCAFP00020019282	1189 (aa)	XP_025330827	UPI00005A1F6A
ENSCAFT00020022325	RC3H2-203	1470	-	ENSCAFP00020019288	489 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020015288's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020015288's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020015288	RC3H2	94	83.223	ENSCAFG00020017112	RC3H1	99	83.973

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020015288	RC3H2	100	99.582	ENSG00000056586	RC3H2	100	99.582	Homo_sapiens
ENSCAFG00020015288	RC3H2	95	87.168	ENSAPOG00000002117	rc3h2	93	56.731	Acanthochromis_polyacanthus
ENSCAFG00020015288	RC3H2	100	99.160	ENSAMEG00000006498	RC3H2	100	99.160	Ailuropoda_melanoleuca
ENSCAFG00020015288	RC3H2	93	86.486	ENSACIG00000005206	rc3h2	96	86.517	Amphilophus_citrinellus
ENSCAFG00020015288	RC3H2	92	87.783	ENSAOCG00000007724	rc3h2	98	86.564	Amphiprion_ocellaris
ENSCAFG00020015288	RC3H2	92	87.755	ENSAOCG00000019780	-	93	87.755	Amphiprion_ocellaris
ENSCAFG00020015288	RC3H2	94	87.528	ENSAPEG00000007757	rc3h2	93	56.993	Amphiprion_percula
ENSCAFG00020015288	RC3H2	94	86.414	ENSATEG00000019414	rc3h2	91	56.433	Anabas_testudineus
ENSCAFG00020015288	RC3H2	95	98.896	ENSAPLG00000013920	RC3H2	100	91.031	Anas_platyrhynchos
ENSCAFG00020015288	RC3H2	100	99.163	ENSANAG00000030862	RC3H2	100	99.163	Aotus_nancymaae
ENSCAFG00020015288	RC3H2	95	84.946	ENSACLG00000023136	rc3h2	92	55.895	Astatotilapia_calliptera
ENSCAFG00020015288	RC3H2	94	85.333	ENSAMXG00000006778	rc3h2	93	54.652	Astyanax_mexicanus
ENSCAFG00020015288	RC3H2	100	98.150	ENSBTAG00000023867	RC3H2	100	98.150	Bos_taurus
ENSCAFG00020015288	RC3H2	100	99.163	ENSCJAG00000020050	RC3H2	100	99.163	Callithrix_jacchus
ENSCAFG00020015288	RC3H2	92	100.000	ENSCAFG00000032522	-	100	100.000	Canis_familiaris
ENSCAFG00020015288	RC3H2	100	98.066	ENSCHIG00000019319	RC3H2	100	98.066	Capra_hircus
ENSCAFG00020015288	RC3H2	79	89.125	ENSCAPG00000017086	RC3H2	93	80.339	Cavia_aperea
ENSCAFG00020015288	RC3H2	100	97.140	ENSCPOG00000008511	RC3H2	100	97.140	Cavia_porcellus
ENSCAFG00020015288	RC3H2	100	99.163	ENSCCAG00000001404	RC3H2	100	99.163	Cebus_capucinus
ENSCAFG00020015288	RC3H2	100	99.582	ENSCATG00000036655	RC3H2	100	99.582	Cercocebus_atys
ENSCAFG00020015288	RC3H2	100	97.393	ENSCLAG00000013261	RC3H2	100	97.393	Chinchilla_lanigera
ENSCAFG00020015288	RC3H2	89	97.458	ENSCSAG00000013416	RC3H2	100	97.458	Chlorocebus_sabaeus
ENSCAFG00020015288	RC3H2	95	98.896	ENSCPBG00000009811	RC3H2	100	89.774	Chrysemys_picta_bellii
ENSCAFG00020015288	RC3H2	100	99.582	ENSCANG00000043140	RC3H2	100	99.582	Colobus_angolensis_palliatus
ENSCAFG00020015288	RC3H2	100	94.870	ENSCGRG00001010006	Rc3h2	100	94.281	Cricetulus_griseus_chok1gshd
ENSCAFG00020015288	RC3H2	95	99.338	ENSCGRG00000009255	Rc3h2	100	94.505	Cricetulus_griseus_crigri
ENSCAFG00020015288	RC3H2	95	86.062	ENSCSEG00000017460	rc3h2	96	55.890	Cynoglossus_semilaevis
ENSCAFG00020015288	RC3H2	94	86.192	ENSCVAG00000012202	rc3h2	91	55.946	Cyprinodon_variegatus
ENSCAFG00020015288	RC3H2	95	84.735	ENSDARG00000063050	rc3h2	96	54.521	Danio_rerio
ENSCAFG00020015288	RC3H2	100	97.309	ENSDNOG00000014557	RC3H2	100	97.309	Dasypus_novemcinctus
ENSCAFG00020015288	RC3H2	100	96.720	ENSDORG00000006398	Rc3h2	100	96.720	Dipodomys_ordii
ENSCAFG00020015288	RC3H2	100	95.795	ENSEASG00005020897	RC3H2	100	95.795	Equus_asinus_asinus
ENSCAFG00020015288	RC3H2	100	98.823	ENSECAG00000022176	RC3H2	100	98.823	Equus_caballus
ENSCAFG00020015288	RC3H2	95	87.611	ENSELUG00000006105	rc3h2	93	57.065	Esox_lucius
ENSCAFG00020015288	RC3H2	100	99.159	ENSFCAG00000007375	RC3H2	100	99.159	Felis_catus
ENSCAFG00020015288	RC3H2	95	98.675	ENSFALG00000002011	RC3H2	100	91.199	Ficedula_albicollis
ENSCAFG00020015288	RC3H2	100	97.645	ENSFDAG00000012477	RC3H2	100	97.645	Fukomys_damarensis
ENSCAFG00020015288	RC3H2	94	87.082	ENSFHEG00000012272	rc3h2	93	55.644	Fundulus_heteroclitus
ENSCAFG00020015288	RC3H2	54	87.160	ENSGMOG00000016709	-	100	51.955	Gadus_morhua
ENSCAFG00020015288	RC3H2	95	98.896	ENSGALG00000001253	RC3H2	100	91.031	Gallus_gallus
ENSCAFG00020015288	RC3H2	95	85.841	ENSGAFG00000007679	rc3h2	96	54.850	Gambusia_affinis
ENSCAFG00020015288	RC3H2	92	86.878	ENSGACG00000017369	rc3h2	100	86.878	Gasterosteus_aculeatus
ENSCAFG00020015288	RC3H2	95	99.117	ENSGAGG00000018295	RC3H2	100	89.941	Gopherus_agassizii
ENSCAFG00020015288	RC3H2	100	99.372	ENSGGOG00000017062	RC3H2	100	99.372	Gorilla_gorilla
ENSCAFG00020015288	RC3H2	95	87.389	ENSHBUG00000003976	rc3h2	92	56.625	Haplochromis_burtoni
ENSCAFG00020015288	RC3H2	100	98.745	ENSHGLG00000012014	-	100	98.745	Heterocephalus_glaber_female
ENSCAFG00020015288	RC3H2	100	97.311	ENSHGLG00100018015	RC3H2	100	97.311	Heterocephalus_glaber_male
ENSCAFG00020015288	RC3H2	94	83.742	ENSHCOG00000003006	rc3h2	87	57.806	Hippocampus_comes
ENSCAFG00020015288	RC3H2	95	83.407	ENSIPUG00000021433	rc3h2	90	56.907	Ictalurus_punctatus
ENSCAFG00020015288	RC3H2	100	97.981	ENSSTOG00000010655	RC3H2	100	97.981	Ictidomys_tridecemlineatus
ENSCAFG00020015288	RC3H2	100	96.725	ENSJJAG00000022376	Rc3h2	100	96.725	Jaculus_jaculus
ENSCAFG00020015288	RC3H2	95	85.619	ENSKMAG00000010936	rc3h2	91	56.346	Kryptolebias_marmoratus
ENSCAFG00020015288	RC3H2	95	93.598	ENSLOCG00000002894	rc3h2	94	62.752	Lepisosteus_oculatus
ENSCAFG00020015288	RC3H2	100	96.468	ENSLAFG00000003521	RC3H2	100	96.468	Loxodonta_africana
ENSCAFG00020015288	RC3H2	100	99.582	ENSMFAG00000035621	RC3H2	100	99.582	Macaca_fascicularis
ENSCAFG00020015288	RC3H2	100	99.582	ENSMMUG00000021134	RC3H2	100	99.582	Macaca_mulatta
ENSCAFG00020015288	RC3H2	100	97.733	ENSMNEG00000031599	RC3H2	100	97.733	Macaca_nemestrina
ENSCAFG00020015288	RC3H2	100	99.582	ENSMLEG00000033809	RC3H2	100	99.582	Mandrillus_leucophaeus
ENSCAFG00020015288	RC3H2	92	87.528	ENSMAMG00000009119	rc3h2	93	87.528	Mastacembelus_armatus
ENSCAFG00020015288	RC3H2	95	87.389	ENSMZEG00005017019	rc3h2	92	56.333	Maylandia_zebra
ENSCAFG00020015288	RC3H2	95	98.462	ENSMGAG00000007984	RC3H2	100	90.962	Meleagris_gallopavo
ENSCAFG00020015288	RC3H2	95	84.327	ENSMAUG00000003117	Rc3h2	95	89.211	Mesocricetus_auratus
ENSCAFG00020015288	RC3H2	100	99.372	ENSMICG00000003227	RC3H2	100	99.372	Microcebus_murinus
ENSCAFG00020015288	RC3H2	100	95.374	ENSMOCG00000009592	Rc3h2	100	95.374	Microtus_ochrogaster
ENSCAFG00020015288	RC3H2	96	85.777	ENSMMOG00000021305	rc3h2	90	87.082	Mola_mola
ENSCAFG00020015288	RC3H2	95	99.117	ENSMODG00000019725	RC3H2	79	94.029	Monodelphis_domestica
ENSCAFG00020015288	RC3H2	92	86.364	ENSMALG00000017885	rc3h2	92	86.364	Monopterus_albus
ENSCAFG00020015288	RC3H2	100	98.536	MGP_CAROLIEiJ_G0023516	Rc3h2	100	98.536	Mus_caroli
ENSCAFG00020015288	RC3H2	100	98.117	ENSMUSG00000075376	Rc3h2	100	98.117	Mus_musculus
ENSCAFG00020015288	RC3H2	100	98.536	MGP_PahariEiJ_G0024969	Rc3h2	100	98.536	Mus_pahari
ENSCAFG00020015288	RC3H2	100	98.326	MGP_SPRETEiJ_G0024436	Rc3h2	100	98.326	Mus_spretus
ENSCAFG00020015288	RC3H2	100	98.654	ENSMPUG00000014141	RC3H2	100	98.654	Mustela_putorius_furo
ENSCAFG00020015288	RC3H2	100	97.143	ENSMLUG00000013992	RC3H2	100	97.143	Myotis_lucifugus
ENSCAFG00020015288	RC3H2	100	95.616	ENSNGAG00000009763	-	100	95.616	Nannospalax_galili
ENSCAFG00020015288	RC3H2	95	87.389	ENSNBRG00000009276	rc3h2	92	56.422	Neolamprologus_brichardi
ENSCAFG00020015288	RC3H2	100	99.582	ENSNLEG00000017204	RC3H2	100	99.582	Nomascus_leucogenys
ENSCAFG00020015288	RC3H2	63	99.209	ENSMEUG00000001299	-	64	99.209	Notamacropus_eugenii
ENSCAFG00020015288	RC3H2	79	98.670	ENSOPRG00000000135	RC3H2	93	92.785	Ochotona_princeps
ENSCAFG00020015288	RC3H2	100	98.745	ENSODEG00000005918	-	100	98.745	Octodon_degus
ENSCAFG00020015288	RC3H2	94	87.973	ENSONIG00000003945	rc3h2	100	59.095	Oreochromis_niloticus
ENSCAFG00020015288	RC3H2	95	99.117	ENSOANG00000008194	RC3H2	100	93.241	Ornithorhynchus_anatinus
ENSCAFG00020015288	RC3H2	100	97.813	ENSOCUG00000008804	RC3H2	100	97.813	Oryctolagus_cuniculus
ENSCAFG00020015288	RC3H2	94	87.528	ENSORLG00000010018	rc3h2	92	56.128	Oryzias_latipes
ENSCAFG00020015288	RC3H2	94	87.528	ENSORLG00020013257	rc3h2	92	56.444	Oryzias_latipes_hni
ENSCAFG00020015288	RC3H2	94	87.528	ENSORLG00015001525	rc3h2	92	56.356	Oryzias_latipes_hsok
ENSCAFG00020015288	RC3H2	94	87.528	ENSOMEG00000023540	rc3h2	93	56.426	Oryzias_melastigma
ENSCAFG00020015288	RC3H2	100	97.313	ENSOGAG00000010678	RC3H2	100	97.313	Otolemur_garnettii
ENSCAFG00020015288	RC3H2	100	97.985	ENSOARG00000013965	RC3H2	100	97.985	Ovis_aries
ENSCAFG00020015288	RC3H2	100	99.372	ENSPPAG00000036013	RC3H2	100	99.372	Pan_paniscus
ENSCAFG00020015288	RC3H2	100	99.076	ENSPPRG00000008698	RC3H2	100	99.076	Panthera_pardus
ENSCAFG00020015288	RC3H2	100	99.076	ENSPTIG00000014257	RC3H2	100	99.076	Panthera_tigris_altaica
ENSCAFG00020015288	RC3H2	100	99.372	ENSPTRG00000021339	RC3H2	100	99.372	Pan_troglodytes
ENSCAFG00020015288	RC3H2	100	95.970	ENSPANG00000025840	RC3H2	100	95.970	Papio_anubis
ENSCAFG00020015288	RC3H2	95	89.183	ENSPKIG00000021910	rc3h2	90	60.376	Paramormyrops_kingsleyae
ENSCAFG00020015288	RC3H2	95	98.896	ENSPSIG00000005393	RC3H2	100	90.277	Pelodiscus_sinensis
ENSCAFG00020015288	RC3H2	93	86.682	ENSPMGG00000023963	rc3h2	94	86.682	Periophthalmus_magnuspinnatus
ENSCAFG00020015288	RC3H2	100	95.458	ENSPEMG00000023441	Rc3h2	100	95.458	Peromyscus_maniculatus_bairdii
ENSCAFG00020015288	RC3H2	95	99.338	ENSPCIG00000025559	RC3H2	100	93.300	Phascolarctos_cinereus
ENSCAFG00020015288	RC3H2	95	86.062	ENSPFOG00000019699	rc3h2	100	58.008	Poecilia_formosa
ENSCAFG00020015288	RC3H2	95	85.619	ENSPLAG00000005799	rc3h2	90	63.303	Poecilia_latipinna
ENSCAFG00020015288	RC3H2	95	86.062	ENSPMEG00000014187	rc3h2	93	54.890	Poecilia_mexicana
ENSCAFG00020015288	RC3H2	95	86.062	ENSPREG00000008979	rc3h2	92	54.714	Poecilia_reticulata
ENSCAFG00020015288	RC3H2	87	90.219	ENSPCAG00000010154	RC3H2	86	90.219	Procavia_capensis
ENSCAFG00020015288	RC3H2	95	84.946	ENSPNYG00000012063	rc3h2	92	55.895	Pundamilia_nyererei
ENSCAFG00020015288	RC3H2	95	86.283	ENSPNAG00000017502	rc3h2	88	58.410	Pygocentrus_nattereri
ENSCAFG00020015288	RC3H2	100	95.627	ENSRNOG00000009196	Rc3h2	100	95.627	Rattus_norvegicus
ENSCAFG00020015288	RC3H2	100	99.582	ENSRBIG00000032579	RC3H2	100	99.582	Rhinopithecus_bieti
ENSCAFG00020015288	RC3H2	100	99.582	ENSRROG00000043784	RC3H2	100	99.582	Rhinopithecus_roxellana
ENSCAFG00020015288	RC3H2	100	98.954	ENSSBOG00000029100	RC3H2	100	98.954	Saimiri_boliviensis_boliviensis
ENSCAFG00020015288	RC3H2	95	99.338	ENSSHAG00000007498	RC3H2	100	93.311	Sarcophilus_harrisii
ENSCAFG00020015288	RC3H2	92	90.023	ENSSFOG00015000964	rc3h2	91	90.023	Scleropages_formosus
ENSCAFG00020015288	RC3H2	95	86.062	ENSSMAG00000020048	rc3h2	93	56.503	Scophthalmus_maximus
ENSCAFG00020015288	RC3H2	95	86.947	ENSSDUG00000016022	rc3h2	93	56.930	Seriola_dumerili
ENSCAFG00020015288	RC3H2	95	86.947	ENSSLDG00000016070	rc3h2	93	56.491	Seriola_lalandi_dorsalis
ENSCAFG00020015288	RC3H2	100	96.138	ENSSARG00000012329	RC3H2	100	96.138	Sorex_araneus
ENSCAFG00020015288	RC3H2	95	97.788	ENSSPUG00000001457	RC3H2	100	87.960	Sphenodon_punctatus
ENSCAFG00020015288	RC3H2	94	87.751	ENSSPAG00000005233	rc3h2	93	56.556	Stegastes_partitus
ENSCAFG00020015288	RC3H2	100	99.163	ENSSSCG00000005575	RC3H2	100	98.487	Sus_scrofa
ENSCAFG00020015288	RC3H2	95	98.896	ENSTGUG00000006889	-	100	91.282	Taeniopygia_guttata
ENSCAFG00020015288	RC3H2	92	86.199	ENSTRUG00000003364	rc3h2	100	86.199	Takifugu_rubripes
ENSCAFG00020015288	RC3H2	96	83.080	ENSTNIG00000004942	rc3h2	100	58.559	Tetraodon_nigroviridis
ENSCAFG00020015288	RC3H2	95	98.455	ENSTBEG00000009622	RC3H2	86	97.222	Tupaia_belangeri
ENSCAFG00020015288	RC3H2	95	99.338	ENSTTRG00000016954	RC3H2	94	98.935	Tursiops_truncatus
ENSCAFG00020015288	RC3H2	100	99.327	ENSUAMG00000015355	RC3H2	100	99.327	Ursus_americanus
ENSCAFG00020015288	RC3H2	100	99.791	ENSUMAG00000003161	RC3H2	100	99.791	Ursus_maritimus
ENSCAFG00020015288	RC3H2	100	98.153	ENSVPAG00000005994	RC3H2	100	98.153	Vicugna_pacos
ENSCAFG00020015288	RC3H2	100	99.832	ENSVVUG00000009519	RC3H2	100	99.832	Vulpes_vulpes
ENSCAFG00020015288	RC3H2	94	86.414	ENSXCOG00000005002	rc3h2	99	84.165	Xiphophorus_couchianus
ENSCAFG00020015288	RC3H2	94	86.860	ENSXMAG00000001724	rc3h2	91	55.437	Xiphophorus_maculatus