EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020015363 (Gene tree)
Gene ID: 112676469
Gene Symbol: SBNO1
Alias: FLJ10701|FLJ10833|MOP3|Sno
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 46884 bases
Position: chrQKWQ01000714.1:6417176-6464059
Accession: 22973
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020020386	ResIII	PF04851.15	7e-08	1	1
ENSCAFP00020020357	ResIII	PF04851.15	8.8e-08	1	1
ENSCAFP00020020334	ResIII	PF04851.15	9.3e-08	1	1
ENSCAFP00020020349	ResIII	PF04851.15	9.4e-08	1	1
ENSCAFP00020020311	ResIII	PF04851.15	9.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020023556	SBNO1-204	4065	-	ENSCAFP00020020357	1354 (aa)	-	-
ENSCAFT00020023589	SBNO1-205	3792	-	ENSCAFP00020020386	1263 (aa)	-	-
ENSCAFT00020023548	SBNO1-203	4116	-	ENSCAFP00020020349	1371 (aa)	-	-
ENSCAFT00020023601	SBNO1-206	759	-	ENSCAFP00020020396	252 (aa)	-	-
ENSCAFT00020023533	SBNO1-202	4146	-	ENSCAFP00020020334	1381 (aa)	-	-
ENSCAFT00020023509	SBNO1-201	4161	-	ENSCAFP00020020311	1386 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020015363's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020015363's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020015363	SBNO1	82	56.723	ENSCAFG00020017115	SBNO2	73	67.574

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020015363	SBNO1	100	97.272	ENSG00000139697	SBNO1	100	97.272	Homo_sapiens
ENSCAFG00020015363	SBNO1	83	81.250	ENSAPOG00000003196	sbno1	98	80.172	Acanthochromis_polyacanthus
ENSCAFG00020015363	SBNO1	100	98.138	ENSAMEG00000015151	SBNO1	100	98.138	Ailuropoda_melanoleuca
ENSCAFG00020015363	SBNO1	99	79.649	ENSACIG00000008088	sbno1	95	79.649	Amphilophus_citrinellus
ENSCAFG00020015363	SBNO1	99	80.536	ENSAOCG00000014859	sbno1	94	80.536	Amphiprion_ocellaris
ENSCAFG00020015363	SBNO1	99	80.536	ENSAPEG00000006069	sbno1	94	80.536	Amphiprion_percula
ENSCAFG00020015363	SBNO1	99	82.852	ENSATEG00000006667	sbno1	95	82.852	Anabas_testudineus
ENSCAFG00020015363	SBNO1	99	92.586	ENSAPLG00000015674	SBNO1	100	91.176	Anas_platyrhynchos
ENSCAFG00020015363	SBNO1	100	91.219	ENSACAG00000015441	SBNO1	88	88.913	Anolis_carolinensis
ENSCAFG00020015363	SBNO1	100	97.200	ENSANAG00000029958	-	100	97.200	Aotus_nancymaae
ENSCAFG00020015363	SBNO1	99	75.238	ENSACLG00000024913	sbno1	99	75.109	Astatotilapia_calliptera
ENSCAFG00020015363	SBNO1	99	84.505	ENSAMXG00000019473	sbno1	95	84.505	Astyanax_mexicanus
ENSCAFG00020015363	SBNO1	99	97.773	ENSBTAG00000020505	SBNO1	99	97.773	Bos_taurus
ENSCAFG00020015363	SBNO1	100	97.200	ENSCJAG00000016599	SBNO1	100	97.200	Callithrix_jacchus
ENSCAFG00020015363	SBNO1	100	98.996	ENSCAFG00000007503	SBNO1	100	98.996	Canis_familiaris
ENSCAFG00020015363	SBNO1	99	98.030	ENSCHIG00000008382	SBNO1	99	98.030	Capra_hircus
ENSCAFG00020015363	SBNO1	100	97.775	ENSTSYG00000012749	SBNO1	100	97.775	Carlito_syrichta
ENSCAFG00020015363	SBNO1	97	97.961	ENSCAPG00000000384	SBNO1	100	97.295	Cavia_aperea
ENSCAFG00020015363	SBNO1	100	97.402	ENSCPOG00000008109	SBNO1	100	97.402	Cavia_porcellus
ENSCAFG00020015363	SBNO1	99	95.095	ENSCCAG00000035316	SBNO1	99	94.694	Cebus_capucinus
ENSCAFG00020015363	SBNO1	99	97.288	ENSCATG00000008239	SBNO1	99	97.288	Cercocebus_atys
ENSCAFG00020015363	SBNO1	100	97.402	ENSCLAG00000008995	SBNO1	100	97.402	Chinchilla_lanigera
ENSCAFG00020015363	SBNO1	85	97.927	ENSCSAG00000002064	SBNO1	100	97.927	Chlorocebus_sabaeus
ENSCAFG00020015363	SBNO1	96	93.462	ENSCHOG00000008814	SBNO1	96	93.462	Choloepus_hoffmanni
ENSCAFG00020015363	SBNO1	100	92.294	ENSCPBG00000025968	SBNO1	99	91.248	Chrysemys_picta_bellii
ENSCAFG00020015363	SBNO1	100	91.900	ENSCANG00000042688	-	100	91.828	Colobus_angolensis_palliatus
ENSCAFG00020015363	SBNO1	100	97.087	ENSCGRG00001017470	Sbno1	100	97.087	Cricetulus_griseus_chok1gshd
ENSCAFG00020015363	SBNO1	100	97.087	ENSCGRG00000004756	Sbno1	100	97.087	Cricetulus_griseus_crigri
ENSCAFG00020015363	SBNO1	99	80.610	ENSCSEG00000011919	sbno1	96	80.357	Cynoglossus_semilaevis
ENSCAFG00020015363	SBNO1	99	80.969	ENSCVAG00000007038	sbno1	97	80.790	Cyprinodon_variegatus
ENSCAFG00020015363	SBNO1	99	84.268	ENSDARG00000099080	sbno1	95	84.268	Danio_rerio
ENSCAFG00020015363	SBNO1	100	97.506	ENSDNOG00000017147	SBNO1	98	96.814	Dasypus_novemcinctus
ENSCAFG00020015363	SBNO1	100	90.210	ENSDORG00000015261	Sbno1	100	89.340	Dipodomys_ordii
ENSCAFG00020015363	SBNO1	93	90.596	ENSETEG00000005620	SBNO1	93	90.596	Echinops_telfairi
ENSCAFG00020015363	SBNO1	72	81.218	ENSEBUG00000013823	sbno1	85	81.218	Eptatretus_burgeri
ENSCAFG00020015363	SBNO1	54	97.368	ENSEASG00005012595	-	92	98.527	Equus_asinus_asinus
ENSCAFG00020015363	SBNO1	100	97.990	ENSECAG00000006127	SBNO1	100	97.990	Equus_caballus
ENSCAFG00020015363	SBNO1	82	99.451	ENSEEUG00000003793	SBNO1	83	99.451	Erinaceus_europaeus
ENSCAFG00020015363	SBNO1	99	84.865	ENSELUG00000002886	sbno1	95	84.865	Esox_lucius
ENSCAFG00020015363	SBNO1	99	98.635	ENSFCAG00000015331	SBNO1	99	98.635	Felis_catus
ENSCAFG00020015363	SBNO1	99	92.767	ENSFALG00000009273	SBNO1	100	91.176	Ficedula_albicollis
ENSCAFG00020015363	SBNO1	99	95.043	ENSFDAG00000014232	SBNO1	99	95.043	Fukomys_damarensis
ENSCAFG00020015363	SBNO1	99	80.969	ENSFHEG00000007360	sbno1	95	80.969	Fundulus_heteroclitus
ENSCAFG00020015363	SBNO1	96	82.385	ENSGMOG00000018229	sbno1	100	77.568	Gadus_morhua
ENSCAFG00020015363	SBNO1	87	93.401	ENSGALG00000003392	SBNO1	99	91.315	Gallus_gallus
ENSCAFG00020015363	SBNO1	99	81.329	ENSGAFG00000003960	sbno1	95	81.149	Gambusia_affinis
ENSCAFG00020015363	SBNO1	96	82.117	ENSGACG00000015633	sbno1	99	78.032	Gasterosteus_aculeatus
ENSCAFG00020015363	SBNO1	100	92.473	ENSGAGG00000001065	SBNO1	99	92.948	Gopherus_agassizii
ENSCAFG00020015363	SBNO1	100	97.559	ENSGGOG00000015000	SBNO1	100	97.559	Gorilla_gorilla
ENSCAFG00020015363	SBNO1	99	69.365	ENSHBUG00000011910	sbno1	99	69.331	Haplochromis_burtoni
ENSCAFG00020015363	SBNO1	100	96.626	ENSHGLG00000014165	-	100	96.626	Heterocephalus_glaber_female
ENSCAFG00020015363	SBNO1	91	82.318	ENSHCOG00000003246	sbno1	95	82.609	Hippocampus_comes
ENSCAFG00020015363	SBNO1	99	83.453	ENSIPUG00000015830	Sbno1	93	85.484	Ictalurus_punctatus
ENSCAFG00020015363	SBNO1	100	98.110	ENSSTOG00000023221	SBNO1	100	98.110	Ictidomys_tridecemlineatus
ENSCAFG00020015363	SBNO1	100	96.985	ENSJJAG00000001741	Sbno1	100	96.985	Jaculus_jaculus
ENSCAFG00020015363	SBNO1	99	81.408	ENSKMAG00000009696	sbno1	95	81.851	Kryptolebias_marmoratus
ENSCAFG00020015363	SBNO1	99	82.765	ENSLBEG00000007623	sbno1	95	82.765	Labrus_bergylta
ENSCAFG00020015363	SBNO1	99	80.500	ENSLACG00000017227	SBNO1	99	82.591	Latimeria_chalumnae
ENSCAFG00020015363	SBNO1	99	86.871	ENSLOCG00000005725	sbno1	95	86.871	Lepisosteus_oculatus
ENSCAFG00020015363	SBNO1	100	96.554	ENSLAFG00000002135	SBNO1	100	96.554	Loxodonta_africana
ENSCAFG00020015363	SBNO1	100	97.272	ENSMFAG00000031429	SBNO1	100	97.272	Macaca_fascicularis
ENSCAFG00020015363	SBNO1	100	97.272	ENSMMUG00000011496	SBNO1	100	97.272	Macaca_mulatta
ENSCAFG00020015363	SBNO1	99	97.107	ENSMLEG00000033260	SBNO1	99	97.288	Mandrillus_leucophaeus
ENSCAFG00020015363	SBNO1	99	82.491	ENSMAMG00000005473	sbno1	95	82.491	Mastacembelus_armatus
ENSCAFG00020015363	SBNO1	99	92.948	ENSMGAG00000003274	SBNO1	100	91.248	Meleagris_gallopavo
ENSCAFG00020015363	SBNO1	52	98.336	ENSMAUG00000004834	-	99	98.336	Mesocricetus_auratus
ENSCAFG00020015363	SBNO1	100	96.554	ENSMICG00000006573	-	99	97.638	Microcebus_murinus
ENSCAFG00020015363	SBNO1	100	96.929	ENSMOCG00000009390	Sbno1	100	96.929	Microtus_ochrogaster
ENSCAFG00020015363	SBNO1	99	81.429	ENSMMOG00000008691	sbno1	94	81.250	Mola_mola
ENSCAFG00020015363	SBNO1	99	94.746	ENSMODG00000012470	SBNO1	98	94.253	Monodelphis_domestica
ENSCAFG00020015363	SBNO1	99	80.072	ENSMALG00000001056	sbno1	95	80.072	Monopterus_albus
ENSCAFG00020015363	SBNO1	99	96.739	MGP_CAROLIEiJ_G0027749	Sbno1	99	98.336	Mus_caroli
ENSCAFG00020015363	SBNO1	99	96.739	ENSMUSG00000038095	Sbno1	99	98.638	Mus_musculus
ENSCAFG00020015363	SBNO1	99	96.695	MGP_PahariEiJ_G0024329	Sbno1	99	98.336	Mus_pahari
ENSCAFG00020015363	SBNO1	99	96.739	MGP_SPRETEiJ_G0028747	Sbno1	99	98.638	Mus_spretus
ENSCAFG00020015363	SBNO1	100	98.492	ENSMPUG00000001658	SBNO1	100	98.492	Mustela_putorius_furo
ENSCAFG00020015363	SBNO1	100	97.200	ENSMLUG00000017159	SBNO1	100	97.200	Myotis_lucifugus
ENSCAFG00020015363	SBNO1	100	97.272	ENSNGAG00000012620	Sbno1	100	97.272	Nannospalax_galili
ENSCAFG00020015363	SBNO1	99	77.917	ENSNBRG00000019189	sbno1	99	75.128	Neolamprologus_brichardi
ENSCAFG00020015363	SBNO1	99	94.959	ENSNLEG00000001502	SBNO1	99	94.558	Nomascus_leucogenys
ENSCAFG00020015363	SBNO1	67	76.956	ENSMEUG00000008768	-	93	84.322	Notamacropus_eugenii
ENSCAFG00020015363	SBNO1	99	95.126	ENSOPRG00000011054	SBNO1	100	93.692	Ochotona_princeps
ENSCAFG00020015363	SBNO1	100	97.402	ENSODEG00000009997	SBNO1	100	97.402	Octodon_degus
ENSCAFG00020015363	SBNO1	99	81.047	ENSONIG00000015348	sbno1	95	81.047	Oreochromis_niloticus
ENSCAFG00020015363	SBNO1	98	95.624	ENSOCUG00000002441	SBNO1	95	95.551	Oryctolagus_cuniculus
ENSCAFG00020015363	SBNO1	99	80.325	ENSORLG00000001593	sbno1	95	80.325	Oryzias_latipes
ENSCAFG00020015363	SBNO1	99	80.325	ENSORLG00020015216	sbno1	95	80.325	Oryzias_latipes_hni
ENSCAFG00020015363	SBNO1	99	80.505	ENSORLG00015002726	sbno1	95	80.505	Oryzias_latipes_hsok
ENSCAFG00020015363	SBNO1	99	80.762	ENSOMEG00000019313	sbno1	95	80.762	Oryzias_melastigma
ENSCAFG00020015363	SBNO1	52	95.613	ENSOGAG00000010781	-	100	94.768	Otolemur_garnettii
ENSCAFG00020015363	SBNO1	99	97.346	ENSOARG00000004404	SBNO1	99	97.346	Ovis_aries
ENSCAFG00020015363	SBNO1	100	97.638	ENSPPAG00000024635	SBNO1	100	97.638	Pan_paniscus
ENSCAFG00020015363	SBNO1	99	98.635	ENSPPRG00000022092	SBNO1	99	98.635	Panthera_pardus
ENSCAFG00020015363	SBNO1	100	98.349	ENSPTIG00000017803	SBNO1	100	98.349	Panthera_tigris_altaica
ENSCAFG00020015363	SBNO1	100	97.717	ENSPTRG00000005597	SBNO1	100	97.717	Pan_troglodytes
ENSCAFG00020015363	SBNO1	100	97.559	ENSPANG00000011640	SBNO1	100	97.559	Papio_anubis
ENSCAFG00020015363	SBNO1	99	84.144	ENSPKIG00000001441	sbno1	95	84.144	Paramormyrops_kingsleyae
ENSCAFG00020015363	SBNO1	99	92.086	ENSPSIG00000009572	-	100	90.609	Pelodiscus_sinensis
ENSCAFG00020015363	SBNO1	91	88.514	ENSPSIG00000009256	-	100	86.946	Pelodiscus_sinensis
ENSCAFG00020015363	SBNO1	100	96.693	ENSPEMG00000016087	Sbno1	100	96.693	Peromyscus_maniculatus_bairdii
ENSCAFG00020015363	SBNO1	99	94.565	ENSPCIG00000010985	SBNO1	99	93.754	Phascolarctos_cinereus
ENSCAFG00020015363	SBNO1	99	81.329	ENSPFOG00000005069	sbno1	95	81.149	Poecilia_formosa
ENSCAFG00020015363	SBNO1	99	81.329	ENSPLAG00000015015	sbno1	95	81.149	Poecilia_latipinna
ENSCAFG00020015363	SBNO1	99	81.329	ENSPMEG00000021212	sbno1	95	81.149	Poecilia_mexicana
ENSCAFG00020015363	SBNO1	99	80.969	ENSPREG00000017746	sbno1	95	80.790	Poecilia_reticulata
ENSCAFG00020015363	SBNO1	100	96.913	ENSPPYG00000005084	SBNO1	100	96.913	Pongo_abelii
ENSCAFG00020015363	SBNO1	89	92.603	ENSPCAG00000008634	SBNO1	88	92.572	Procavia_capensis
ENSCAFG00020015363	SBNO1	100	97.631	ENSPCOG00000024277	SBNO1	100	97.631	Propithecus_coquereli
ENSCAFG00020015363	SBNO1	92	99.398	ENSPVAG00000015304	SBNO1	87	99.398	Pteropus_vampyrus
ENSCAFG00020015363	SBNO1	99	81.047	ENSPNYG00000004291	sbno1	95	81.047	Pundamilia_nyererei
ENSCAFG00020015363	SBNO1	99	85.252	ENSPNAG00000015622	sbno1	95	85.072	Pygocentrus_nattereri
ENSCAFG00020015363	SBNO1	99	97.163	ENSRNOG00000001064	Sbno1	99	97.163	Rattus_norvegicus
ENSCAFG00020015363	SBNO1	100	97.717	ENSRROG00000034230	SBNO1	100	97.717	Rhinopithecus_roxellana
ENSCAFG00020015363	SBNO1	96	93.590	ENSSBOG00000015422	SBNO1	100	93.590	Saimiri_boliviensis_boliviensis
ENSCAFG00020015363	SBNO1	99	84.324	ENSSFOG00015019025	sbno1	95	84.324	Scleropages_formosus
ENSCAFG00020015363	SBNO1	99	80.969	ENSSMAG00000013640	sbno1	95	80.969	Scophthalmus_maximus
ENSCAFG00020015363	SBNO1	99	82.491	ENSSDUG00000023480	sbno1	95	82.491	Seriola_dumerili
ENSCAFG00020015363	SBNO1	99	82.491	ENSSLDG00000007928	sbno1	95	82.491	Seriola_lalandi_dorsalis
ENSCAFG00020015363	SBNO1	91	95.907	ENSSARG00000002594	SBNO1	89	97.280	Sorex_araneus
ENSCAFG00020015363	SBNO1	99	91.171	ENSSPUG00000012640	SBNO1	100	90.095	Sphenodon_punctatus
ENSCAFG00020015363	SBNO1	99	80.969	ENSSPAG00000016244	sbno1	95	80.969	Stegastes_partitus
ENSCAFG00020015363	SBNO1	100	97.775	ENSSSCG00000009776	SBNO1	100	97.775	Sus_scrofa
ENSCAFG00020015363	SBNO1	99	92.948	ENSTGUG00000005380	SBNO1	100	91.105	Taeniopygia_guttata
ENSCAFG00020015363	SBNO1	99	82.299	ENSTRUG00000018490	sbno1	95	82.299	Takifugu_rubripes
ENSCAFG00020015363	SBNO1	57	69.877	ENSTNIG00000013506	sbno1	99	70.632	Tetraodon_nigroviridis
ENSCAFG00020015363	SBNO1	100	98.492	ENSUAMG00000019671	SBNO1	100	98.492	Ursus_americanus
ENSCAFG00020015363	SBNO1	100	98.492	ENSUMAG00000004002	SBNO1	100	98.492	Ursus_maritimus
ENSCAFG00020015363	SBNO1	95	97.826	ENSVPAG00000007024	SBNO1	95	97.826	Vicugna_pacos
ENSCAFG00020015363	SBNO1	100	99.067	ENSVVUG00000027807	SBNO1	100	99.067	Vulpes_vulpes
ENSCAFG00020015363	SBNO1	99	90.018	ENSXETG00000031930	SBNO1	95	90.018	Xenopus_tropicalis
ENSCAFG00020015363	SBNO1	86	82.415	ENSXCOG00000011607	sbno1	90	82.199	Xiphophorus_couchianus
ENSCAFG00020015363	SBNO1	99	80.969	ENSXMAG00000002140	sbno1	95	80.790	Xiphophorus_maculatus