EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020015475 (Gene tree)
Gene ID: 112648480
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 56233 bases
Position: chrQKWQ01001577.1:13702071-13758303
Accession: 16792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020019494	EST1	PF10374.9	8.6e-25	1	1
ENSCAFP00020019474	EST1	PF10374.9	8.9e-25	1	1
ENSCAFP00020019493	EST1	PF10374.9	9.1e-25	1	1
ENSCAFP00020019495	EST1	PF10374.9	2.2e-22	1	1
ENSCAFP00020019494	EST1_DNA_bind	PF10373.9	2.1e-55	1	1
ENSCAFP00020019474	EST1_DNA_bind	PF10373.9	2.2e-55	1	1
ENSCAFP00020019493	EST1_DNA_bind	PF10373.9	2.3e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020022561	SMG7-204	555	-	ENSCAFP00020019495	184 (aa)	-	-
ENSCAFT00020022560	SMG7-203	3411	-	ENSCAFP00020019494	1136 (aa)	-	-
ENSCAFT00020022563	SMG7-205	222	-	ENSCAFP00020019497	73 (aa)	-	-
ENSCAFT00020022540	SMG7-201	3510	-	ENSCAFP00020019474	1169 (aa)	-	UPI0002749FF9
ENSCAFT00020022559	SMG7-202	3561	-	ENSCAFP00020019493	1186 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020015475's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020015475's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020015475	SMG7	100	97.265	ENSG00000116698	SMG7	100	98.667	Homo_sapiens
ENSCAFG00020015475	SMG7	86	92.453	ENSAPOG00000009611	smg7	95	74.135	Acanthochromis_polyacanthus
ENSCAFG00020015475	SMG7	100	98.327	ENSAMEG00000002357	SMG7	100	98.601	Ailuropoda_melanoleuca
ENSCAFG00020015475	SMG7	70	94.574	ENSACIG00000015152	smg7	100	65.183	Amphilophus_citrinellus
ENSCAFG00020015475	SMG7	89	90.244	ENSAOCG00000013538	smg7	99	65.588	Amphiprion_ocellaris
ENSCAFG00020015475	SMG7	89	90.244	ENSAPEG00000007851	smg7	99	65.447	Amphiprion_percula
ENSCAFG00020015475	SMG7	89	90.244	ENSATEG00000006931	smg7	99	65.228	Anabas_testudineus
ENSCAFG00020015475	SMG7	99	88.860	ENSAPLG00000015811	SMG7	99	88.772	Anas_platyrhynchos
ENSCAFG00020015475	SMG7	99	87.647	ENSACAG00000014989	SMG7	99	87.993	Anolis_carolinensis
ENSCAFG00020015475	SMG7	98	98.361	ENSANAG00000028114	SMG7	99	98.361	Aotus_nancymaae
ENSCAFG00020015475	SMG7	89	90.244	ENSACLG00000022079	smg7	99	65.582	Astatotilapia_calliptera
ENSCAFG00020015475	SMG7	89	90.854	ENSAMXG00000020809	smg7	99	67.993	Astyanax_mexicanus
ENSCAFG00020015475	SMG7	100	97.009	ENSBTAG00000008003	SMG7	100	97.009	Bos_taurus
ENSCAFG00020015475	SMG7	99	97.089	ENSCJAG00000005135	SMG7	100	97.084	Callithrix_jacchus
ENSCAFG00020015475	SMG7	100	100.000	ENSCAFG00000013276	SMG7	100	100.000	Canis_familiaris
ENSCAFG00020015475	SMG7	97	96.646	ENSCHIG00000018192	SMG7	99	96.646	Capra_hircus
ENSCAFG00020015475	SMG7	100	96.581	ENSTSYG00000002667	SMG7	100	96.581	Carlito_syrichta
ENSCAFG00020015475	SMG7	99	97.082	ENSCPOG00000008906	SMG7	100	97.082	Cavia_porcellus
ENSCAFG00020015475	SMG7	98	98.352	ENSCCAG00000028596	SMG7	99	98.352	Cebus_capucinus
ENSCAFG00020015475	SMG7	100	97.436	ENSCATG00000011063	SMG7	100	97.436	Cercocebus_atys
ENSCAFG00020015475	SMG7	100	96.496	ENSCLAG00000010751	SMG7	100	96.519	Chinchilla_lanigera
ENSCAFG00020015475	SMG7	100	97.265	ENSCSAG00000012654	SMG7	100	97.265	Chlorocebus_sabaeus
ENSCAFG00020015475	SMG7	89	88.061	ENSCHOG00000010522	SMG7	93	88.539	Choloepus_hoffmanni
ENSCAFG00020015475	SMG7	99	91.132	ENSCPBG00000015724	SMG7	99	90.970	Chrysemys_picta_bellii
ENSCAFG00020015475	SMG7	85	51.220	ENSCING00000006953	-	95	53.247	Ciona_intestinalis
ENSCAFG00020015475	SMG7	99	96.919	ENSCANG00000015680	SMG7	100	97.205	Colobus_angolensis_palliatus
ENSCAFG00020015475	SMG7	99	95.540	ENSCGRG00001013705	Smg7	100	95.369	Cricetulus_griseus_chok1gshd
ENSCAFG00020015475	SMG7	99	94.587	ENSCGRG00000018401	Smg7	100	95.387	Cricetulus_griseus_crigri
ENSCAFG00020015475	SMG7	83	90.789	ENSCSEG00000007392	-	88	89.103	Cynoglossus_semilaevis
ENSCAFG00020015475	SMG7	79	89.189	ENSCVAG00000011842	smg7	100	68.500	Cyprinodon_variegatus
ENSCAFG00020015475	SMG7	89	90.854	ENSDARG00000060767	smg7	99	67.079	Danio_rerio
ENSCAFG00020015475	SMG7	98	96.171	ENSDORG00000007331	Smg7	100	96.171	Dipodomys_ordii
ENSCAFG00020015475	SMG7	94	95.164	ENSETEG00000002654	SMG7	99	95.255	Echinops_telfairi
ENSCAFG00020015475	SMG7	100	98.120	ENSEASG00005006524	SMG7	100	98.120	Equus_asinus_asinus
ENSCAFG00020015475	SMG7	100	98.205	ENSECAG00000004313	SMG7	100	98.205	Equus_caballus
ENSCAFG00020015475	SMG7	93	97.325	ENSEEUG00000002024	SMG7	92	97.325	Erinaceus_europaeus
ENSCAFG00020015475	SMG7	89	90.244	ENSELUG00000010293	smg7	99	66.339	Esox_lucius
ENSCAFG00020015475	SMG7	99	98.459	ENSFCAG00000010900	SMG7	100	98.459	Felis_catus
ENSCAFG00020015475	SMG7	98	85.629	ENSFALG00000003047	SMG7	100	85.969	Ficedula_albicollis
ENSCAFG00020015475	SMG7	97	96.640	ENSFDAG00000012121	SMG7	99	96.524	Fukomys_damarensis
ENSCAFG00020015475	SMG7	89	87.195	ENSFHEG00000011073	smg7	99	63.908	Fundulus_heteroclitus
ENSCAFG00020015475	SMG7	89	87.805	ENSGMOG00000004916	smg7	89	74.109	Gadus_morhua
ENSCAFG00020015475	SMG7	99	88.303	ENSGALG00000004667	SMG7	99	88.664	Gallus_gallus
ENSCAFG00020015475	SMG7	97	84.066	ENSGAFG00000019000	smg7	99	63.863	Gambusia_affinis
ENSCAFG00020015475	SMG7	89	89.024	ENSGACG00000001634	smg7	99	64.654	Gasterosteus_aculeatus
ENSCAFG00020015475	SMG7	95	89.655	ENSGAGG00000024208	-	86	95.062	Gopherus_agassizii
ENSCAFG00020015475	SMG7	100	97.179	ENSGGOG00000002342	SMG7	100	97.179	Gorilla_gorilla
ENSCAFG00020015475	SMG7	89	90.244	ENSHBUG00000003726	smg7	98	72.081	Haplochromis_burtoni
ENSCAFG00020015475	SMG7	99	95.487	ENSHGLG00000009353	SMG7	100	96.613	Heterocephalus_glaber_female
ENSCAFG00020015475	SMG7	99	96.283	ENSHGLG00100009637	-	99	96.283	Heterocephalus_glaber_male
ENSCAFG00020015475	SMG7	97	88.614	ENSHGLG00100004878	-	99	88.438	Heterocephalus_glaber_male
ENSCAFG00020015475	SMG7	95	78.977	ENSHCOG00000012804	-	88	84.242	Hippocampus_comes
ENSCAFG00020015475	SMG7	85	92.994	ENSIPUG00000016997	smg7	99	67.860	Ictalurus_punctatus
ENSCAFG00020015475	SMG7	98	97.563	ENSSTOG00000000401	SMG7	100	97.563	Ictidomys_tridecemlineatus
ENSCAFG00020015475	SMG7	97	94.263	ENSJJAG00000012351	Smg7	99	94.351	Jaculus_jaculus
ENSCAFG00020015475	SMG7	95	86.782	ENSJJAG00000000309	-	98	86.782	Jaculus_jaculus
ENSCAFG00020015475	SMG7	72	93.182	ENSKMAG00000004900	smg7	100	62.084	Kryptolebias_marmoratus
ENSCAFG00020015475	SMG7	84	92.903	ENSLBEG00000002983	smg7	99	65.574	Labrus_bergylta
ENSCAFG00020015475	SMG7	52	62.500	ENSLBEG00000005220	-	75	64.098	Labrus_bergylta
ENSCAFG00020015475	SMG7	86	94.340	ENSLACG00000000972	SMG7	99	76.021	Latimeria_chalumnae
ENSCAFG00020015475	SMG7	89	93.252	ENSLOCG00000002010	smg7	99	69.154	Lepisosteus_oculatus
ENSCAFG00020015475	SMG7	98	97.128	ENSLAFG00000008186	SMG7	100	97.128	Loxodonta_africana
ENSCAFG00020015475	SMG7	100	97.350	ENSMFAG00000031653	SMG7	99	98.352	Macaca_fascicularis
ENSCAFG00020015475	SMG7	100	97.436	ENSMMUG00000018458	SMG7	100	97.436	Macaca_mulatta
ENSCAFG00020015475	SMG7	98	98.352	ENSMNEG00000034798	SMG7	99	98.352	Macaca_nemestrina
ENSCAFG00020015475	SMG7	100	97.436	ENSMLEG00000037170	SMG7	100	97.436	Mandrillus_leucophaeus
ENSCAFG00020015475	SMG7	89	89.634	ENSMAMG00000018733	smg7	86	64.332	Mastacembelus_armatus
ENSCAFG00020015475	SMG7	89	90.244	ENSMZEG00005015247	smg7	99	65.411	Maylandia_zebra
ENSCAFG00020015475	SMG7	97	88.241	ENSMGAG00000001561	SMG7	98	88.510	Meleagris_gallopavo
ENSCAFG00020015475	SMG7	98	95.997	ENSMAUG00000019484	Smg7	100	95.822	Mesocricetus_auratus
ENSCAFG00020015475	SMG7	99	97.431	ENSMICG00000007145	SMG7	100	97.822	Microcebus_murinus
ENSCAFG00020015475	SMG7	98	95.997	ENSMOCG00000020748	Smg7	100	95.822	Microtus_ochrogaster
ENSCAFG00020015475	SMG7	86	89.937	ENSMMOG00000001524	smg7	99	63.903	Mola_mola
ENSCAFG00020015475	SMG7	92	92.994	ENSMODG00000007139	SMG7	99	93.090	Monodelphis_domestica
ENSCAFG00020015475	SMG7	89	90.244	ENSMALG00000000061	smg7	94	69.154	Monopterus_albus
ENSCAFG00020015475	SMG7	98	95.648	MGP_CAROLIEiJ_G0014704	Smg7	100	95.213	Mus_caroli
ENSCAFG00020015475	SMG7	98	95.474	ENSMUSG00000042772	Smg7	100	95.300	Mus_musculus
ENSCAFG00020015475	SMG7	98	95.561	MGP_PahariEiJ_G0027940	Smg7	100	95.387	Mus_pahari
ENSCAFG00020015475	SMG7	98	95.561	MGP_SPRETEiJ_G0015511	Smg7	100	95.387	Mus_spretus
ENSCAFG00020015475	SMG7	96	98.751	ENSMPUG00000011732	SMG7	97	98.751	Mustela_putorius_furo
ENSCAFG00020015475	SMG7	97	97.087	ENSMLUG00000015417	SMG7	99	97.087	Myotis_lucifugus
ENSCAFG00020015475	SMG7	99	95.748	ENSNGAG00000009836	Smg7	100	95.906	Nannospalax_galili
ENSCAFG00020015475	SMG7	98	61.471	ENSNBRG00000024343	smg7	98	70.000	Neolamprologus_brichardi
ENSCAFG00020015475	SMG7	100	97.521	ENSNLEG00000018018	SMG7	100	97.521	Nomascus_leucogenys
ENSCAFG00020015475	SMG7	71	91.870	ENSMEUG00000004681	SMG7	73	91.870	Notamacropus_eugenii
ENSCAFG00020015475	SMG7	84	97.419	ENSOPRG00000013942	SMG7	96	84.826	Ochotona_princeps
ENSCAFG00020015475	SMG7	98	96.432	ENSODEG00000010390	SMG7	100	96.432	Octodon_degus
ENSCAFG00020015475	SMG7	89	90.244	ENSONIG00000000277	smg7	99	65.188	Oreochromis_niloticus
ENSCAFG00020015475	SMG7	96	91.135	ENSOANG00000000994	SMG7	100	91.223	Ornithorhynchus_anatinus
ENSCAFG00020015475	SMG7	100	89.316	ENSOCUG00000005887	SMG7	95	89.487	Oryctolagus_cuniculus
ENSCAFG00020015475	SMG7	98	83.333	ENSORLG00000007314	smg7	70	92.763	Oryzias_latipes
ENSCAFG00020015475	SMG7	89	88.415	ENSORLG00020015779	smg7	99	64.138	Oryzias_latipes_hni
ENSCAFG00020015475	SMG7	89	88.957	ENSORLG00015012289	smg7	99	63.681	Oryzias_latipes_hsok
ENSCAFG00020015475	SMG7	89	88.415	ENSOMEG00000002328	smg7	99	63.786	Oryzias_melastigma
ENSCAFG00020015475	SMG7	94	96.804	ENSOGAG00000003107	SMG7	93	96.804	Otolemur_garnettii
ENSCAFG00020015475	SMG7	100	96.581	ENSOARG00000001352	SMG7	100	96.581	Ovis_aries
ENSCAFG00020015475	SMG7	98	98.333	ENSPPAG00000031619	SMG7	100	97.293	Pan_paniscus
ENSCAFG00020015475	SMG7	99	98.630	ENSPPRG00000011222	SMG7	100	98.630	Panthera_pardus
ENSCAFG00020015475	SMG7	96	98.427	ENSPTIG00000007242	SMG7	100	98.427	Panthera_tigris_altaica
ENSCAFG00020015475	SMG7	98	98.333	ENSPTRG00000001764	SMG7	100	97.293	Pan_troglodytes
ENSCAFG00020015475	SMG7	100	97.436	ENSPANG00000004520	SMG7	100	97.436	Papio_anubis
ENSCAFG00020015475	SMG7	85	91.083	ENSPKIG00000007242	smg7	100	68.000	Paramormyrops_kingsleyae
ENSCAFG00020015475	SMG7	97	90.941	ENSPSIG00000012201	SMG7	99	90.765	Pelodiscus_sinensis
ENSCAFG00020015475	SMG7	85	85.987	ENSPMGG00000002179	-	93	81.065	Periophthalmus_magnuspinnatus
ENSCAFG00020015475	SMG7	57	57.653	ENSPMGG00000021833	smg7	89	57.653	Periophthalmus_magnuspinnatus
ENSCAFG00020015475	SMG7	98	94.778	ENSPEMG00000011315	Smg7	100	94.604	Peromyscus_maniculatus_bairdii
ENSCAFG00020015475	SMG7	99	92.633	ENSPCIG00000003786	SMG7	99	92.470	Phascolarctos_cinereus
ENSCAFG00020015475	SMG7	89	87.805	ENSPFOG00000019219	smg7	99	63.547	Poecilia_formosa
ENSCAFG00020015475	SMG7	89	87.805	ENSPLAG00000001446	smg7	99	63.582	Poecilia_latipinna
ENSCAFG00020015475	SMG7	89	87.805	ENSPMEG00000005218	smg7	99	62.832	Poecilia_mexicana
ENSCAFG00020015475	SMG7	89	87.195	ENSPREG00000019039	smg7	92	61.654	Poecilia_reticulata
ENSCAFG00020015475	SMG7	99	97.257	ENSPPYG00000000427	SMG7	99	97.257	Pongo_abelii
ENSCAFG00020015475	SMG7	90	88.578	ENSPCAG00000008360	SMG7	94	85.332	Procavia_capensis
ENSCAFG00020015475	SMG7	100	97.947	ENSPCOG00000011996	SMG7	100	97.947	Propithecus_coquereli
ENSCAFG00020015475	SMG7	84	98.065	ENSPVAG00000000851	SMG7	89	92.308	Pteropus_vampyrus
ENSCAFG00020015475	SMG7	89	90.244	ENSPNYG00000007643	smg7	99	65.437	Pundamilia_nyererei
ENSCAFG00020015475	SMG7	89	90.244	ENSPNAG00000011374	smg7	98	69.192	Pygocentrus_nattereri
ENSCAFG00020015475	SMG7	99	94.859	ENSRNOG00000027962	Smg7	100	94.974	Rattus_norvegicus
ENSCAFG00020015475	SMG7	100	97.350	ENSRBIG00000036316	SMG7	100	97.350	Rhinopithecus_bieti
ENSCAFG00020015475	SMG7	100	97.350	ENSRROG00000035719	SMG7	100	97.350	Rhinopithecus_roxellana
ENSCAFG00020015475	SMG7	97	97.753	ENSSBOG00000023454	SMG7	100	97.118	Saimiri_boliviensis_boliviensis
ENSCAFG00020015475	SMG7	99	92.642	ENSSHAG00000013147	SMG7	99	92.138	Sarcophilus_harrisii
ENSCAFG00020015475	SMG7	89	89.024	ENSSFOG00015017252	smg7	99	76.842	Scleropages_formosus
ENSCAFG00020015475	SMG7	89	90.244	ENSSMAG00000006067	smg7	99	65.844	Scophthalmus_maximus
ENSCAFG00020015475	SMG7	89	90.244	ENSSDUG00000017543	smg7	99	65.039	Seriola_dumerili
ENSCAFG00020015475	SMG7	91	89.222	ENSSLDG00000003750	-	99	89.222	Seriola_lalandi_dorsalis
ENSCAFG00020015475	SMG7	99	89.576	ENSSPUG00000002064	SMG7	99	89.488	Sphenodon_punctatus
ENSCAFG00020015475	SMG7	77	94.326	ENSSPAG00000008733	smg7	99	66.638	Stegastes_partitus
ENSCAFG00020015475	SMG7	100	97.949	ENSSSCG00000015558	SMG7	100	97.949	Sus_scrofa
ENSCAFG00020015475	SMG7	99	88.546	ENSTGUG00000003928	SMG7	100	88.899	Taeniopygia_guttata
ENSCAFG00020015475	SMG7	95	81.818	ENSTRUG00000003612	-	96	81.818	Takifugu_rubripes
ENSCAFG00020015475	SMG7	89	85.455	ENSTNIG00000002802	smg7	99	63.331	Tetraodon_nigroviridis
ENSCAFG00020015475	SMG7	78	95.339	ENSTBEG00000003220	SMG7	75	95.339	Tupaia_belangeri
ENSCAFG00020015475	SMG7	94	97.808	ENSTTRG00000014778	SMG7	94	97.808	Tursiops_truncatus
ENSCAFG00020015475	SMG7	96	94.698	ENSUAMG00000017473	SMG7	100	94.698	Ursus_americanus
ENSCAFG00020015475	SMG7	94	98.816	ENSUMAG00000016389	SMG7	100	98.816	Ursus_maritimus
ENSCAFG00020015475	SMG7	100	99.829	ENSVVUG00000008976	SMG7	100	99.829	Vulpes_vulpes
ENSCAFG00020015475	SMG7	86	90.506	ENSXETG00000012528	smg7	99	71.316	Xenopus_tropicalis
ENSCAFG00020015475	SMG7	89	88.415	ENSXMAG00000007123	smg7	99	63.932	Xiphophorus_maculatus