EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020015515 (Gene tree)
Gene ID: 112659202
Gene Symbol: RBM4
Alias: LARK|RBM4A|ZCCHC21|ZCRB3A
Full Name: RNA-binding protein 14
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 23457 bases
Position: chrQKWQ01000195.1:5180089-5203545
Accession: 112659202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020019515	zf-CCHC	PF00098.23	2.1e-07	1	1
ENSCAFP00020019515	RRM_5	PF13893.6	4.3e-08	1	2
ENSCAFP00020019515	RRM_5	PF13893.6	4.3e-08	2	2
ENSCAFP00020019515	RRM_1	PF00076.22	2.2e-34	1	2
ENSCAFP00020019515	RRM_1	PF00076.22	2.2e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020022581	RBM4-201	2215	-	ENSCAFP00020019515	365 (aa)	XP_025301473	UPI00005A36DA

Gene Model

Click here to download ENSCAFG00020015515's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020015515's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020015515	RBM4	100	88.219	ENSCAFG00020015519	RBM4B	100	87.671

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020015515	RBM4	100	99.178	ENSG00000173933	RBM4	100	100.000	Homo_sapiens
ENSCAFG00020015515	RBM4	100	87.945	ENSG00000173914	RBM4B	97	97.842	Homo_sapiens
ENSCAFG00020015515	RBM4	99	73.224	ENSG00000248643	RBM14-RBM4	100	74.044	Homo_sapiens
ENSCAFG00020015515	RBM4	100	88.493	ENSAMEG00000010906	RBM4B	100	87.945	Ailuropoda_melanoleuca
ENSCAFG00020015515	RBM4	100	100.000	ENSAMEG00000010914	RBM4	100	100.000	Ailuropoda_melanoleuca
ENSCAFG00020015515	RBM4	100	87.945	ENSANAG00000023478	RBM4B	97	97.842	Aotus_nancymaae
ENSCAFG00020015515	RBM4	100	97.534	ENSBTAG00000031688	RBM4	100	97.534	Bos_taurus
ENSCAFG00020015515	RBM4	100	88.767	ENSBTAG00000000423	RBM4B	100	88.219	Bos_taurus
ENSCAFG00020015515	RBM4	100	87.671	ENSCJAG00000013666	RBM4B	97	97.842	Callithrix_jacchus
ENSCAFG00020015515	RBM4	100	100.000	ENSCAFG00000012388	RBM4	100	100.000	Canis_familiaris
ENSCAFG00020015515	RBM4	100	88.219	ENSCAFG00000012378	RBM4B	100	87.671	Canis_familiaris
ENSCAFG00020015515	RBM4	100	88.767	ENSCHIG00000008907	RBM4B	100	88.219	Capra_hircus
ENSCAFG00020015515	RBM4	100	97.534	ENSCHIG00000020613	RBM4	100	97.534	Capra_hircus
ENSCAFG00020015515	RBM4	66	79.668	ENSTSYG00000009580	RBM4B	96	78.838	Carlito_syrichta
ENSCAFG00020015515	RBM4	100	87.671	ENSCAPG00000009570	RBM4B	100	87.397	Cavia_aperea
ENSCAFG00020015515	RBM4	100	99.178	ENSCAPG00000016600	RBM4	100	99.178	Cavia_aperea
ENSCAFG00020015515	RBM4	100	87.671	ENSCPOG00000013689	RBM4B	100	87.397	Cavia_porcellus
ENSCAFG00020015515	RBM4	100	99.178	ENSCPOG00000013194	RBM4	100	99.178	Cavia_porcellus
ENSCAFG00020015515	RBM4	100	87.945	ENSCCAG00000016501	RBM4B	97	97.842	Cebus_capucinus
ENSCAFG00020015515	RBM4	55	73.632	ENSCCAG00000023319	-	100	73.632	Cebus_capucinus
ENSCAFG00020015515	RBM4	100	87.945	ENSCATG00000035353	RBM4B	97	97.842	Cercocebus_atys
ENSCAFG00020015515	RBM4	100	98.904	ENSCLAG00000014756	RBM4	100	98.904	Chinchilla_lanigera
ENSCAFG00020015515	RBM4	100	87.671	ENSCLAG00000015287	RBM4B	100	87.397	Chinchilla_lanigera
ENSCAFG00020015515	RBM4	100	87.945	ENSCSAG00000008361	RBM4B	100	87.397	Chlorocebus_sabaeus
ENSCAFG00020015515	RBM4	62	98.678	ENSCHOG00000009753	RBM14-RBM4	100	98.678	Choloepus_hoffmanni
ENSCAFG00020015515	RBM4	100	89.041	ENSCHOG00000002892	RBM4B	100	88.493	Choloepus_hoffmanni
ENSCAFG00020015515	RBM4	100	74.413	ENSCPBG00000023800	-	100	73.560	Chrysemys_picta_bellii
ENSCAFG00020015515	RBM4	100	87.945	ENSCANG00000021868	RBM4B	97	97.842	Colobus_angolensis_palliatus
ENSCAFG00020015515	RBM4	100	95.342	ENSCGRG00001016609	-	97	98.551	Cricetulus_griseus_chok1gshd
ENSCAFG00020015515	RBM4	100	84.658	ENSCGRG00001024693	Rbm4b	100	85.205	Cricetulus_griseus_chok1gshd
ENSCAFG00020015515	RBM4	100	95.342	ENSCGRG00000010183	-	97	98.551	Cricetulus_griseus_crigri
ENSCAFG00020015515	RBM4	100	84.658	ENSCGRG00000012112	Rbm4b	100	85.205	Cricetulus_griseus_crigri
ENSCAFG00020015515	RBM4	100	87.397	ENSDNOG00000045639	-	100	86.849	Dasypus_novemcinctus
ENSCAFG00020015515	RBM4	100	88.493	ENSDNOG00000019500	-	100	87.945	Dasypus_novemcinctus
ENSCAFG00020015515	RBM4	100	99.452	ENSDNOG00000032390	RBM4	100	99.452	Dasypus_novemcinctus
ENSCAFG00020015515	RBM4	100	95.068	ENSDORG00000004538	-	100	95.342	Dipodomys_ordii
ENSCAFG00020015515	RBM4	100	85.205	ENSDORG00000029108	Rbm4b	100	85.753	Dipodomys_ordii
ENSCAFG00020015515	RBM4	62	63.877	ENSETEG00000018142	-	100	64.317	Echinops_telfairi
ENSCAFG00020015515	RBM4	100	88.219	ENSEASG00005005068	RBM4B	100	87.671	Equus_asinus_asinus
ENSCAFG00020015515	RBM4	100	98.082	ENSEASG00005005064	RBM4	100	98.082	Equus_asinus_asinus
ENSCAFG00020015515	RBM4	100	98.082	ENSECAG00000022940	RBM4	100	98.082	Equus_caballus
ENSCAFG00020015515	RBM4	100	87.945	ENSECAG00000022987	RBM4B	100	87.397	Equus_caballus
ENSCAFG00020015515	RBM4	100	88.525	ENSEEUG00000000058	RBM4B	100	87.671	Erinaceus_europaeus
ENSCAFG00020015515	RBM4	100	87.671	ENSFCAG00000007394	RBM4B	97	97.842	Felis_catus
ENSCAFG00020015515	RBM4	100	100.000	ENSFCAG00000029651	RBM4	100	100.000	Felis_catus
ENSCAFG00020015515	RBM4	100	68.817	ENSFALG00000002073	-	100	67.925	Ficedula_albicollis
ENSCAFG00020015515	RBM4	100	87.671	ENSFDAG00000015530	RBM4B	100	87.397	Fukomys_damarensis
ENSCAFG00020015515	RBM4	100	98.356	ENSFDAG00000005447	RBM4	100	98.356	Fukomys_damarensis
ENSCAFG00020015515	RBM4	100	76.923	ENSGALG00000037946	-	100	75.000	Gallus_gallus
ENSCAFG00020015515	RBM4	100	75.521	ENSGAGG00000008553	-	100	73.890	Gopherus_agassizii
ENSCAFG00020015515	RBM4	100	87.945	ENSGGOG00000011698	RBM4B	97	97.842	Gorilla_gorilla
ENSCAFG00020015515	RBM4	100	88.219	ENSHGLG00000016412	-	100	87.671	Heterocephalus_glaber_female
ENSCAFG00020015515	RBM4	79	55.655	ENSHGLG00000000117	-	95	65.753	Heterocephalus_glaber_female
ENSCAFG00020015515	RBM4	100	98.356	ENSHGLG00000009991	RBM4	100	98.356	Heterocephalus_glaber_female
ENSCAFG00020015515	RBM4	100	73.699	ENSHGLG00000002853	-	100	73.699	Heterocephalus_glaber_female
ENSCAFG00020015515	RBM4	100	84.384	ENSHGLG00100003854	RBM4	97	99.275	Heterocephalus_glaber_male
ENSCAFG00020015515	RBM4	100	87.158	ENSHGLG00100003978	-	100	86.885	Heterocephalus_glaber_male
ENSCAFG00020015515	RBM4	96	74.785	ENSHGLG00100020033	-	100	74.785	Heterocephalus_glaber_male
ENSCAFG00020015515	RBM4	100	99.726	ENSSTOG00000022811	RBM4	100	99.726	Ictidomys_tridecemlineatus
ENSCAFG00020015515	RBM4	100	87.945	ENSSTOG00000011226	RBM4B	100	87.671	Ictidomys_tridecemlineatus
ENSCAFG00020015515	RBM4	100	84.110	ENSJJAG00000020870	Rbm4b	100	83.836	Jaculus_jaculus
ENSCAFG00020015515	RBM4	100	84.384	ENSLAFG00000002285	RBM4B	100	84.932	Loxodonta_africana
ENSCAFG00020015515	RBM4	100	96.164	ENSLAFG00000028147	-	100	96.164	Loxodonta_africana
ENSCAFG00020015515	RBM4	100	87.945	ENSMFAG00000033927	RBM4B	97	98.551	Macaca_fascicularis
ENSCAFG00020015515	RBM4	100	87.945	ENSMNEG00000043371	RBM4B	97	97.842	Macaca_nemestrina
ENSCAFG00020015515	RBM4	100	87.945	ENSMLEG00000028563	RBM4B	97	98.551	Mandrillus_leucophaeus
ENSCAFG00020015515	RBM4	100	84.384	ENSMAUG00000017027	Rbm4b	100	84.658	Mesocricetus_auratus
ENSCAFG00020015515	RBM4	100	88.493	ENSMICG00000003820	RBM4B	97	97.842	Microcebus_murinus
ENSCAFG00020015515	RBM4	100	84.932	ENSMOCG00000001835	Rbm4b	100	85.479	Microtus_ochrogaster
ENSCAFG00020015515	RBM4	100	91.304	ENSMODG00000008056	-	100	91.576	Monodelphis_domestica
ENSCAFG00020015515	RBM4	100	95.628	MGP_CAROLIEiJ_G0022516	-	100	95.628	Mus_caroli
ENSCAFG00020015515	RBM4	100	85.479	MGP_CAROLIEiJ_G0022515	Rbm4b	100	86.027	Mus_caroli
ENSCAFG00020015515	RBM4	99	68.120	MGP_CAROLIEiJ_G0022514	-	100	68.937	Mus_caroli
ENSCAFG00020015515	RBM4	100	85.205	ENSMUSG00000033760	Rbm4b	91	97.842	Mus_musculus
ENSCAFG00020015515	RBM4	100	95.628	ENSMUSG00000094936	Rbm4	100	98.837	Mus_musculus
ENSCAFG00020015515	RBM4	100	95.628	ENSMUSG00000096370	Gm21992	100	95.628	Mus_musculus
ENSCAFG00020015515	RBM4	100	95.902	MGP_PahariEiJ_G0014011	-	100	95.902	Mus_pahari
ENSCAFG00020015515	RBM4	100	84.932	MGP_PahariEiJ_G0014012	Rbm4b	100	85.479	Mus_pahari
ENSCAFG00020015515	RBM4	100	95.902	MGP_PahariEiJ_G0014013	-	100	95.902	Mus_pahari
ENSCAFG00020015515	RBM4	100	79.268	MGP_SPRETEiJ_G0023430	-	100	79.268	Mus_spretus
ENSCAFG00020015515	RBM4	100	74.306	MGP_SPRETEiJ_G0023429	-	100	75.000	Mus_spretus
ENSCAFG00020015515	RBM4	100	79.268	MGP_SPRETEiJ_G0023428	-	94	79.268	Mus_spretus
ENSCAFG00020015515	RBM4	100	99.726	ENSMPUG00000003443	RBM4	100	99.726	Mustela_putorius_furo
ENSCAFG00020015515	RBM4	100	88.767	ENSMPUG00000003450	RBM4B	100	88.219	Mustela_putorius_furo
ENSCAFG00020015515	RBM4	100	86.575	ENSMLUG00000001290	RBM4B	100	85.753	Myotis_lucifugus
ENSCAFG00020015515	RBM4	99	97.245	ENSMLUG00000004076	RBM4	95	97.245	Myotis_lucifugus
ENSCAFG00020015515	RBM4	100	86.339	ENSNGAG00000016292	Rbm4b	100	86.027	Nannospalax_galili
ENSCAFG00020015515	RBM4	100	87.123	ENSNLEG00000006213	RBM4B	97	97.842	Nomascus_leucogenys
ENSCAFG00020015515	RBM4	100	99.178	ENSNLEG00000035021	RBM4	100	99.178	Nomascus_leucogenys
ENSCAFG00020015515	RBM4	62	86.784	ENSMEUG00000005739	-	100	86.784	Notamacropus_eugenii
ENSCAFG00020015515	RBM4	100	88.767	ENSMEUG00000001445	-	100	88.767	Notamacropus_eugenii
ENSCAFG00020015515	RBM4	100	98.630	ENSOPRG00000009149	RBM4	100	98.630	Ochotona_princeps
ENSCAFG00020015515	RBM4	100	88.767	ENSOPRG00000009158	RBM4B	100	87.945	Ochotona_princeps
ENSCAFG00020015515	RBM4	100	78.630	ENSODEG00000001866	-	100	79.178	Octodon_degus
ENSCAFG00020015515	RBM4	100	87.945	ENSODEG00000017696	-	100	87.671	Octodon_degus
ENSCAFG00020015515	RBM4	100	78.904	ENSOANG00000003143	-	84	78.630	Ornithorhynchus_anatinus
ENSCAFG00020015515	RBM4	100	86.027	ENSOANG00000011036	-	100	84.932	Ornithorhynchus_anatinus
ENSCAFG00020015515	RBM4	100	88.219	ENSOCUG00000006695	LARK	100	87.671	Oryctolagus_cuniculus
ENSCAFG00020015515	RBM4	100	99.726	ENSOCUG00000004731	RBM4	100	99.726	Oryctolagus_cuniculus
ENSCAFG00020015515	RBM4	100	88.219	ENSOGAG00000015648	RBM4B	100	87.671	Otolemur_garnettii
ENSCAFG00020015515	RBM4	100	99.178	ENSOGAG00000015647	RBM4	100	99.178	Otolemur_garnettii
ENSCAFG00020015515	RBM4	100	88.493	ENSOARG00000007759	RBM4B	100	88.493	Ovis_aries
ENSCAFG00020015515	RBM4	100	93.699	ENSOARG00000007700	RBM4	100	94.247	Ovis_aries
ENSCAFG00020015515	RBM4	100	87.945	ENSPPAG00000015125	RBM4B	97	97.842	Pan_paniscus
ENSCAFG00020015515	RBM4	100	100.000	ENSPPRG00000003533	RBM4	100	100.000	Panthera_pardus
ENSCAFG00020015515	RBM4	100	87.397	ENSPPRG00000003388	RBM4B	97	97.842	Panthera_pardus
ENSCAFG00020015515	RBM4	100	85.205	ENSPTIG00000016180	RBM4	97	99.275	Panthera_tigris_altaica
ENSCAFG00020015515	RBM4	100	87.397	ENSPTIG00000015426	RBM4B	97	97.842	Panthera_tigris_altaica
ENSCAFG00020015515	RBM4	100	87.945	ENSPTRG00000003935	RBM4B	97	97.842	Pan_troglodytes
ENSCAFG00020015515	RBM4	100	87.945	ENSPANG00000020672	RBM4B	97	97.842	Papio_anubis
ENSCAFG00020015515	RBM4	100	74.536	ENSPSIG00000003430	-	100	73.670	Pelodiscus_sinensis
ENSCAFG00020015515	RBM4	76	77.855	ENSPSIG00000003477	-	95	77.397	Pelodiscus_sinensis
ENSCAFG00020015515	RBM4	100	85.205	ENSPEMG00000009144	Rbm4b	100	85.753	Peromyscus_maniculatus_bairdii
ENSCAFG00020015515	RBM4	100	98.082	ENSPPYG00000003012	RBM4	100	98.082	Pongo_abelii
ENSCAFG00020015515	RBM4	100	87.945	ENSPPYG00000003010	RBM4B	100	87.397	Pongo_abelii
ENSCAFG00020015515	RBM4	100	97.260	ENSPCAG00000003393	-	100	97.260	Procavia_capensis
ENSCAFG00020015515	RBM4	100	88.219	ENSPCOG00000027885	RBM4B	97	97.842	Propithecus_coquereli
ENSCAFG00020015515	RBM4	100	88.493	ENSPVAG00000010487	RBM4B	100	87.945	Pteropus_vampyrus
ENSCAFG00020015515	RBM4	100	99.178	ENSPVAG00000010486	RBM4	100	99.178	Pteropus_vampyrus
ENSCAFG00020015515	RBM4	100	85.753	ENSRNOG00000061795	Rbm4b	100	86.301	Rattus_norvegicus
ENSCAFG00020015515	RBM4	100	96.721	ENSRNOG00000050741	Rbm4	100	96.721	Rattus_norvegicus
ENSCAFG00020015515	RBM4	100	87.945	ENSRBIG00000019394	RBM4B	97	97.842	Rhinopithecus_bieti
ENSCAFG00020015515	RBM4	100	87.945	ENSRROG00000032850	RBM4B	97	97.842	Rhinopithecus_roxellana
ENSCAFG00020015515	RBM4	100	87.397	ENSSBOG00000034474	RBM4B	97	97.122	Saimiri_boliviensis_boliviensis
ENSCAFG00020015515	RBM4	100	87.123	ENSSHAG00000008386	-	100	86.849	Sarcophilus_harrisii
ENSCAFG00020015515	RBM4	100	88.219	ENSSARG00000010710	RBM4B	100	87.945	Sorex_araneus
ENSCAFG00020015515	RBM4	100	100.000	ENSSSCG00000032437	RBM4	100	100.000	Sus_scrofa
ENSCAFG00020015515	RBM4	77	78.840	ENSTGUG00000016779	-	94	78.125	Taeniopygia_guttata
ENSCAFG00020015515	RBM4	100	86.301	ENSTBEG00000003748	RBM4B	100	86.027	Tupaia_belangeri
ENSCAFG00020015515	RBM4	63	99.545	ENSTBEG00000003727	-	70	99.545	Tupaia_belangeri
ENSCAFG00020015515	RBM4	100	88.219	ENSTTRG00000011166	RBM4B	100	87.671	Tursiops_truncatus
ENSCAFG00020015515	RBM4	100	98.082	ENSTTRG00000011164	RBM4	100	98.082	Tursiops_truncatus
ENSCAFG00020015515	RBM4	100	88.767	ENSUAMG00000004745	RBM4B	100	88.219	Ursus_americanus
ENSCAFG00020015515	RBM4	100	100.000	ENSUAMG00000014882	RBM4	100	100.000	Ursus_americanus
ENSCAFG00020015515	RBM4	64	99.574	ENSUMAG00000011738	-	97	99.275	Ursus_maritimus
ENSCAFG00020015515	RBM4	100	88.219	ENSVPAG00000001950	RBM4B	100	87.671	Vicugna_pacos
ENSCAFG00020015515	RBM4	100	97.534	ENSVPAG00000001949	RBM4	100	97.534	Vicugna_pacos
ENSCAFG00020015515	RBM4	100	88.219	ENSVVUG00000010619	RBM4B	100	87.671	Vulpes_vulpes
ENSCAFG00020015515	RBM4	100	99.452	ENSVVUG00000010622	RBM4	100	99.452	Vulpes_vulpes