EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020015566 (Gene tree)
Gene ID: 112671642
Gene Symbol: GAR1
Alias: NOLA1
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 7137 bases
Position: chrQKWQ01001846.1:3633428-3640564
Accession: 14264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020019582	Gar1	PF04410.14	9.1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020022665	GAR1-201	1273	-	ENSCAFP00020019582	192 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020015566's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020015566's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020015566	GAR1	96	97.826	ENSAMEG00000004605	GAR1	89	97.826	Ailuropoda_melanoleuca
ENSCAFG00020015566	GAR1	55	89.623	ENSAPLG00000010926	GAR1	58	89.524	Anas_platyrhynchos
ENSCAFG00020015566	GAR1	96	96.237	ENSBTAG00000000748	GAR1	88	96.237	Bos_taurus
ENSCAFG00020015566	GAR1	77	93.878	ENSCAFG00000011503	GAR1	60	93.878	Canis_familiaris
ENSCAFG00020015566	GAR1	67	88.372	ENSCHIG00000011049	-	51	90.099	Capra_hircus
ENSCAFG00020015566	GAR1	96	96.774	ENSCHIG00000016026	-	87	96.774	Capra_hircus
ENSCAFG00020015566	GAR1	74	76.923	ENSTSYG00000026632	-	54	90.566	Carlito_syrichta
ENSCAFG00020015566	GAR1	57	99.083	ENSTSYG00000013668	-	50	99.057	Carlito_syrichta
ENSCAFG00020015566	GAR1	57	99.091	ENSCATG00000021854	GAR1	54	99.057	Cercocebus_atys
ENSCAFG00020015566	GAR1	57	97.273	ENSCLAG00000005335	GAR1	96	96.104	Chinchilla_lanigera
ENSCAFG00020015566	GAR1	56	99.065	ENSCSAG00000003922	GAR1	54	99.057	Chlorocebus_sabaeus
ENSCAFG00020015566	GAR1	55	92.453	ENSCPBG00000004310	GAR1	68	78.358	Chrysemys_picta_bellii
ENSCAFG00020015566	GAR1	56	93.458	ENSCVAG00000002103	gar1	50	93.269	Cyprinodon_variegatus
ENSCAFG00020015566	GAR1	57	98.165	ENSDNOG00000037632	GAR1	54	98.113	Dasypus_novemcinctus
ENSCAFG00020015566	GAR1	96	96.809	ENSECAG00000013624	GAR1	87	96.809	Equus_caballus
ENSCAFG00020015566	GAR1	76	57.241	ENSFCAG00000025841	-	55	63.793	Felis_catus
ENSCAFG00020015566	GAR1	96	100.000	ENSFCAG00000040791	-	88	100.000	Felis_catus
ENSCAFG00020015566	GAR1	54	93.269	ENSGAGG00000004393	GAR1	54	91.509	Gopherus_agassizii
ENSCAFG00020015566	GAR1	58	80.180	ENSGGOG00000036205	-	53	80.189	Gorilla_gorilla
ENSCAFG00020015566	GAR1	56	99.065	ENSHGLG00000000493	GAR1	96	98.630	Heterocephalus_glaber_female
ENSCAFG00020015566	GAR1	57	96.330	ENSSTOG00000005577	GAR1	68	96.154	Ictidomys_tridecemlineatus
ENSCAFG00020015566	GAR1	79	66.225	ENSLACG00000003306	GAR1	63	87.619	Latimeria_chalumnae
ENSCAFG00020015566	GAR1	56	83.333	ENSMFAG00000003572	-	52	82.075	Macaca_fascicularis
ENSCAFG00020015566	GAR1	57	95.413	ENSMAUG00000016788	Gar1	88	80.357	Mesocricetus_auratus
ENSCAFG00020015566	GAR1	57	96.330	ENSMOCG00000001340	Gar1	66	100.000	Microtus_ochrogaster
ENSCAFG00020015566	GAR1	56	96.262	ENSMMOG00000004156	gar1	51	96.154	Mola_mola
ENSCAFG00020015566	GAR1	57	95.413	MGP_CAROLIEiJ_G0025627	Gar1	66	100.000	Mus_caroli
ENSCAFG00020015566	GAR1	57	95.455	ENSMUSG00000028010	Gar1	66	100.000	Mus_musculus
ENSCAFG00020015566	GAR1	57	97.273	MGP_PahariEiJ_G0027076	Gar1	66	100.000	Mus_pahari
ENSCAFG00020015566	GAR1	57	95.455	MGP_SPRETEiJ_G0026580	Gar1	66	100.000	Mus_spretus
ENSCAFG00020015566	GAR1	96	99.457	ENSMPUG00000008615	GAR1	88	99.457	Mustela_putorius_furo
ENSCAFG00020015566	GAR1	96	92.347	ENSMLUG00000003776	GAR1	88	92.347	Myotis_lucifugus
ENSCAFG00020015566	GAR1	57	97.273	ENSNGAG00000008268	Gar1	99	96.053	Nannospalax_galili
ENSCAFG00020015566	GAR1	58	82.883	ENSNLEG00000034282	-	54	82.075	Nomascus_leucogenys
ENSCAFG00020015566	GAR1	57	85.321	ENSOPRG00000012089	GAR1	57	91.525	Ochotona_princeps
ENSCAFG00020015566	GAR1	56	98.131	ENSODEG00000011083	GAR1	55	97.170	Octodon_degus
ENSCAFG00020015566	GAR1	57	98.165	ENSOGAG00000004693	GAR1	50	98.113	Otolemur_garnettii
ENSCAFG00020015566	GAR1	96	96.774	ENSOARG00000004910	GAR1	88	96.774	Ovis_aries
ENSCAFG00020015566	GAR1	57	99.083	ENSPPAG00000014081	GAR1	53	99.057	Pan_paniscus
ENSCAFG00020015566	GAR1	96	99.457	ENSPPRG00000023697	GAR1	88	99.457	Panthera_pardus
ENSCAFG00020015566	GAR1	99	97.906	ENSPTIG00000021565	GAR1	88	99.457	Panthera_tigris_altaica
ENSCAFG00020015566	GAR1	57	99.091	ENSPTRG00000016364	GAR1	54	99.057	Pan_troglodytes
ENSCAFG00020015566	GAR1	57	95.413	ENSPEMG00000015838	Gar1	66	98.077	Peromyscus_maniculatus_bairdii
ENSCAFG00020015566	GAR1	56	93.458	ENSPMEG00000009320	gar1	50	93.269	Poecilia_mexicana
ENSCAFG00020015566	GAR1	56	99.065	ENSPCOG00000027049	GAR1	54	99.057	Propithecus_coquereli
ENSCAFG00020015566	GAR1	95	96.739	ENSPVAG00000005992	GAR1	77	96.739	Pteropus_vampyrus
ENSCAFG00020015566	GAR1	57	91.818	ENSPNYG00000020926	gar1	54	84.496	Pundamilia_nyererei
ENSCAFG00020015566	GAR1	57	96.364	ENSRNOG00000061146	Gar1	61	97.115	Rattus_norvegicus
ENSCAFG00020015566	GAR1	58	81.250	ENSRBIG00000042411	-	63	71.094	Rhinopithecus_bieti
ENSCAFG00020015566	GAR1	56	99.065	ENSRBIG00000019547	GAR1	54	99.057	Rhinopithecus_bieti
ENSCAFG00020015566	GAR1	58	81.250	ENSRROG00000044348	-	61	71.094	Rhinopithecus_roxellana
ENSCAFG00020015566	GAR1	57	99.091	ENSRROG00000028454	GAR1	54	99.057	Rhinopithecus_roxellana
ENSCAFG00020015566	GAR1	55	93.396	ENSSPUG00000008707	GAR1	59	91.509	Sphenodon_punctatus
ENSCAFG00020015566	GAR1	96	97.312	ENSSSCG00000009137	GAR1	89	97.312	Sus_scrofa
ENSCAFG00020015566	GAR1	52	89.899	ENSTGUG00000004185	GAR1	65	90.625	Taeniopygia_guttata
ENSCAFG00020015566	GAR1	61	89.744	ENSTRUG00000020580	gar1	59	82.258	Takifugu_rubripes
ENSCAFG00020015566	GAR1	54	93.269	ENSTNIG00000013023	gar1	59	93.269	Tetraodon_nigroviridis
ENSCAFG00020015566	GAR1	100	97.917	ENSUAMG00000005652	GAR1	100	97.917	Ursus_americanus
ENSCAFG00020015566	GAR1	96	97.826	ENSUMAG00000000776	GAR1	88	97.826	Ursus_maritimus
ENSCAFG00020015566	GAR1	96	98.378	ENSVPAG00000009844	GAR1	78	98.378	Vicugna_pacos
ENSCAFG00020015566	GAR1	96	100.000	ENSVVUG00000017612	GAR1	95	100.000	Vulpes_vulpes
ENSCAFG00020015566	GAR1	64	86.885	ENSXETG00000024114	gar1	67	74.830	Xenopus_tropicalis