EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020015648 (Gene tree)
Gene ID: 112648504
Gene Symbol: SWT1
Alias: C1orf26|FLJ20121|HsSwt1
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 90460 bases
Position: chrQKWQ01001577.1:15180928-15271387
Accession: 16785
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020019746	PIN_4	PF13638.6	4.2e-27	1	1
ENSCAFP00020019747	PIN_4	PF13638.6	4.4e-27	1	1
ENSCAFP00020019745	PIN_4	PF13638.6	4.6e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020022855	SWT1-201	2718	-	ENSCAFP00020019745	905 (aa)	-	-
ENSCAFT00020022857	SWT1-203	2607	-	ENSCAFP00020019747	868 (aa)	-	-
ENSCAFT00020022856	SWT1-202	2559	-	ENSCAFP00020019746	852 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020015648's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020015648's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020015648	SWT1	99	80.471	ENSG00000116668	SWT1	99	78.070	Homo_sapiens
ENSCAFG00020015648	SWT1	64	34.247	ENSAPOG00000014897	-	58	34.359	Acanthochromis_polyacanthus
ENSCAFG00020015648	SWT1	99	88.679	ENSAMEG00000013585	SWT1	100	86.249	Ailuropoda_melanoleuca
ENSCAFG00020015648	SWT1	64	34.589	ENSAOCG00000013932	swt1	58	34.701	Amphiprion_ocellaris
ENSCAFG00020015648	SWT1	64	34.418	ENSAPEG00000009613	-	58	34.530	Amphiprion_percula
ENSCAFG00020015648	SWT1	64	35.112	ENSATEG00000018946	swt1	57	35.112	Anabas_testudineus
ENSCAFG00020015648	SWT1	82	50.070	ENSAPLG00000008607	SWT1	99	49.388	Anas_platyrhynchos
ENSCAFG00020015648	SWT1	68	47.684	ENSACAG00000002276	SWT1	67	47.774	Anolis_carolinensis
ENSCAFG00020015648	SWT1	99	80.235	ENSANAG00000027068	SWT1	99	77.741	Aotus_nancymaae
ENSCAFG00020015648	SWT1	63	33.565	ENSACLG00000009742	swt1	68	33.391	Astatotilapia_calliptera
ENSCAFG00020015648	SWT1	68	39.189	ENSAMXG00000010971	swt1	60	38.758	Astyanax_mexicanus
ENSCAFG00020015648	SWT1	70	77.722	ENSBTAG00000004492	SWT1	100	76.682	Bos_taurus
ENSCAFG00020015648	SWT1	99	78.966	ENSCJAG00000005544	SWT1	100	76.561	Callithrix_jacchus
ENSCAFG00020015648	SWT1	99	99.527	ENSCAFG00000013543	SWT1	99	97.451	Canis_familiaris
ENSCAFG00020015648	SWT1	96	81.697	ENSCHIG00000023511	SWT1	100	87.648	Capra_hircus
ENSCAFG00020015648	SWT1	99	79.671	ENSTSYG00000010470	SWT1	100	77.547	Carlito_syrichta
ENSCAFG00020015648	SWT1	92	75.445	ENSCPOG00000014251	SWT1	100	72.845	Cavia_porcellus
ENSCAFG00020015648	SWT1	99	80.565	ENSCCAG00000033926	SWT1	99	78.180	Cebus_capucinus
ENSCAFG00020015648	SWT1	99	81.148	ENSCATG00000042210	SWT1	99	87.053	Cercocebus_atys
ENSCAFG00020015648	SWT1	98	76.038	ENSCLAG00000013959	SWT1	99	73.702	Chinchilla_lanigera
ENSCAFG00020015648	SWT1	99	80.562	ENSCSAG00000012895	SWT1	99	78.251	Chlorocebus_sabaeus
ENSCAFG00020015648	SWT1	62	87.500	ENSCHOG00000002211	-	64	87.500	Choloepus_hoffmanni
ENSCAFG00020015648	SWT1	98	47.712	ENSCPBG00000015691	SWT1	94	48.727	Chrysemys_picta_bellii
ENSCAFG00020015648	SWT1	99	81.199	ENSCANG00000032207	SWT1	99	86.815	Colobus_angolensis_palliatus
ENSCAFG00020015648	SWT1	99	73.145	ENSCGRG00001022955	Swt1	100	69.045	Cricetulus_griseus_chok1gshd
ENSCAFG00020015648	SWT1	99	73.145	ENSCGRG00000010224	Swt1	100	71.021	Cricetulus_griseus_crigri
ENSCAFG00020015648	SWT1	65	34.396	ENSCSEG00000017352	swt1	75	34.003	Cynoglossus_semilaevis
ENSCAFG00020015648	SWT1	66	38.947	ENSDARG00000094010	swt1	57	38.947	Danio_rerio
ENSCAFG00020015648	SWT1	89	74.968	ENSDNOG00000005254	SWT1	100	72.727	Dasypus_novemcinctus
ENSCAFG00020015648	SWT1	94	77.943	ENSDORG00000010531	Swt1	95	77.943	Dipodomys_ordii
ENSCAFG00020015648	SWT1	97	78.795	ENSEASG00005005530	SWT1	99	78.147	Equus_asinus_asinus
ENSCAFG00020015648	SWT1	97	80.241	ENSECAG00000012085	SWT1	99	80.430	Equus_caballus
ENSCAFG00020015648	SWT1	87	86.207	ENSEEUG00000003664	SWT1	88	86.207	Erinaceus_europaeus
ENSCAFG00020015648	SWT1	65	35.945	ENSELUG00000020565	swt1	57	36.457	Esox_lucius
ENSCAFG00020015648	SWT1	99	86.941	ENSFCAG00000011286	SWT1	100	85.181	Felis_catus
ENSCAFG00020015648	SWT1	68	52.640	ENSFALG00000003206	SWT1	67	52.640	Ficedula_albicollis
ENSCAFG00020015648	SWT1	99	75.147	ENSFDAG00000007569	SWT1	100	72.887	Fukomys_damarensis
ENSCAFG00020015648	SWT1	68	54.932	ENSGALG00000034230	SWT1	67	55.102	Gallus_gallus
ENSCAFG00020015648	SWT1	77	31.034	ENSGAFG00000007803	-	68	31.474	Gambusia_affinis
ENSCAFG00020015648	SWT1	94	48.834	ENSGAGG00000025050	SWT1	99	58.621	Gopherus_agassizii
ENSCAFG00020015648	SWT1	62	86.450	ENSGGOG00000041167	-	95	86.450	Gorilla_gorilla
ENSCAFG00020015648	SWT1	65	33.445	ENSHBUG00000006188	swt1	68	33.277	Haplochromis_burtoni
ENSCAFG00020015648	SWT1	98	76.841	ENSHGLG00000006542	SWT1	97	76.841	Heterocephalus_glaber_female
ENSCAFG00020015648	SWT1	98	77.208	ENSHGLG00100014408	SWT1	99	75.000	Heterocephalus_glaber_male
ENSCAFG00020015648	SWT1	66	36.379	ENSIPUG00000009113	-	58	36.301	Ictalurus_punctatus
ENSCAFG00020015648	SWT1	99	77.529	ENSSTOG00000010356	SWT1	100	75.439	Ictidomys_tridecemlineatus
ENSCAFG00020015648	SWT1	97	70.482	ENSJJAG00000015927	Swt1	100	67.401	Jaculus_jaculus
ENSCAFG00020015648	SWT1	65	33.731	ENSKMAG00000012533	swt1	58	33.731	Kryptolebias_marmoratus
ENSCAFG00020015648	SWT1	65	35.833	ENSLBEG00000020663	-	59	35.833	Labrus_bergylta
ENSCAFG00020015648	SWT1	79	48.406	ENSLACG00000009194	SWT1	99	48.406	Latimeria_chalumnae
ENSCAFG00020015648	SWT1	64	41.982	ENSLOCG00000001749	swt1	98	41.405	Lepisosteus_oculatus
ENSCAFG00020015648	SWT1	69	88.776	ENSLAFG00000004346	-	100	88.776	Loxodonta_africana
ENSCAFG00020015648	SWT1	99	80.328	ENSMFAG00000031793	SWT1	99	86.325	Macaca_fascicularis
ENSCAFG00020015648	SWT1	99	78.306	ENSMMUG00000013882	SWT1	99	83.849	Macaca_mulatta
ENSCAFG00020015648	SWT1	99	80.539	ENSMNEG00000035502	SWT1	99	86.154	Macaca_nemestrina
ENSCAFG00020015648	SWT1	99	81.551	ENSMLEG00000038692	SWT1	99	87.053	Mandrillus_leucophaeus
ENSCAFG00020015648	SWT1	65	33.613	ENSMZEG00005018489	swt1	68	33.445	Maylandia_zebra
ENSCAFG00020015648	SWT1	68	53.500	ENSMGAG00000000973	SWT1	100	53.500	Meleagris_gallopavo
ENSCAFG00020015648	SWT1	99	66.667	ENSMAUG00000007996	Swt1	97	65.093	Mesocricetus_auratus
ENSCAFG00020015648	SWT1	99	82.139	ENSMICG00000014975	SWT1	100	79.409	Microcebus_murinus
ENSCAFG00020015648	SWT1	99	71.378	ENSMOCG00000009776	Swt1	98	69.451	Microtus_ochrogaster
ENSCAFG00020015648	SWT1	99	61.645	ENSMODG00000007472	SWT1	99	59.375	Monodelphis_domestica
ENSCAFG00020015648	SWT1	64	35.739	ENSMALG00000019308	swt1	57	35.739	Monopterus_albus
ENSCAFG00020015648	SWT1	99	70.047	MGP_CAROLIEiJ_G0014692	Swt1	99	69.011	Mus_caroli
ENSCAFG00020015648	SWT1	99	68.868	ENSMUSG00000052748	Swt1	98	68.022	Mus_musculus
ENSCAFG00020015648	SWT1	99	71.849	MGP_PahariEiJ_G0027928	Swt1	98	70.362	Mus_pahari
ENSCAFG00020015648	SWT1	99	69.811	MGP_SPRETEiJ_G0015499	Swt1	98	68.791	Mus_spretus
ENSCAFG00020015648	SWT1	99	87.500	ENSMPUG00000011913	SWT1	100	84.928	Mustela_putorius_furo
ENSCAFG00020015648	SWT1	99	78.092	ENSMLUG00000001142	SWT1	98	76.872	Myotis_lucifugus
ENSCAFG00020015648	SWT1	99	73.852	ENSNGAG00000021080	Swt1	98	72.887	Nannospalax_galili
ENSCAFG00020015648	SWT1	99	80.235	ENSNLEG00000018031	SWT1	99	77.632	Nomascus_leucogenys
ENSCAFG00020015648	SWT1	99	47.953	ENSMEUG00000000236	-	94	48.304	Notamacropus_eugenii
ENSCAFG00020015648	SWT1	89	66.588	ENSOPRG00000000692	SWT1	88	66.588	Ochotona_princeps
ENSCAFG00020015648	SWT1	63	34.926	ENSONIG00000009994	swt1	99	34.783	Oreochromis_niloticus
ENSCAFG00020015648	SWT1	92	56.538	ENSOANG00000001013	-	100	57.019	Ornithorhynchus_anatinus
ENSCAFG00020015648	SWT1	99	71.345	ENSOCUG00000004901	SWT1	99	68.271	Oryctolagus_cuniculus
ENSCAFG00020015648	SWT1	63	33.162	ENSORLG00000009682	swt1	58	33.162	Oryzias_latipes
ENSCAFG00020015648	SWT1	63	33.276	ENSORLG00020011654	swt1	59	33.276	Oryzias_latipes_hni
ENSCAFG00020015648	SWT1	63	33.162	ENSORLG00015007734	swt1	59	33.162	Oryzias_latipes_hsok
ENSCAFG00020015648	SWT1	76	32.997	ENSOMEG00000006607	swt1	66	33.094	Oryzias_melastigma
ENSCAFG00020015648	SWT1	99	79.388	ENSOGAG00000016195	SWT1	100	77.228	Otolemur_garnettii
ENSCAFG00020015648	SWT1	99	81.958	ENSOARG00000004156	SWT1	98	80.000	Ovis_aries
ENSCAFG00020015648	SWT1	99	80.235	ENSPPAG00000021400	SWT1	99	77.851	Pan_paniscus
ENSCAFG00020015648	SWT1	99	87.647	ENSPPRG00000023754	SWT1	100	85.730	Panthera_pardus
ENSCAFG00020015648	SWT1	99	87.529	ENSPTIG00000021889	SWT1	100	85.620	Panthera_tigris_altaica
ENSCAFG00020015648	SWT1	99	80.235	ENSPTRG00000001777	SWT1	99	77.851	Pan_troglodytes
ENSCAFG00020015648	SWT1	99	80.562	ENSPANG00000005099	SWT1	99	86.542	Papio_anubis
ENSCAFG00020015648	SWT1	66	36.189	ENSPKIG00000005979	swt1	59	36.189	Paramormyrops_kingsleyae
ENSCAFG00020015648	SWT1	98	47.338	ENSPSIG00000008961	SWT1	93	47.338	Pelodiscus_sinensis
ENSCAFG00020015648	SWT1	99	71.967	ENSPEMG00000008208	Swt1	98	70.033	Peromyscus_maniculatus_bairdii
ENSCAFG00020015648	SWT1	99	61.155	ENSPCIG00000002443	SWT1	99	72.519	Phascolarctos_cinereus
ENSCAFG00020015648	SWT1	64	33.333	ENSPFOG00000010988	-	69	33.993	Poecilia_formosa
ENSCAFG00020015648	SWT1	64	33.333	ENSPLAG00000022908	-	60	33.388	Poecilia_latipinna
ENSCAFG00020015648	SWT1	77	31.857	ENSPMEG00000006943	-	68	31.857	Poecilia_mexicana
ENSCAFG00020015648	SWT1	99	80.118	ENSPPYG00000000415	SWT1	99	77.632	Pongo_abelii
ENSCAFG00020015648	SWT1	99	66.981	ENSPCAG00000008337	SWT1	99	63.846	Procavia_capensis
ENSCAFG00020015648	SWT1	74	89.011	ENSPCOG00000018195	-	96	89.011	Propithecus_coquereli
ENSCAFG00020015648	SWT1	83	81.487	ENSPVAG00000005968	SWT1	80	81.717	Pteropus_vampyrus
ENSCAFG00020015648	SWT1	65	33.613	ENSPNYG00000012934	swt1	68	33.445	Pundamilia_nyererei
ENSCAFG00020015648	SWT1	68	37.416	ENSPNAG00000017795	swt1	61	37.793	Pygocentrus_nattereri
ENSCAFG00020015648	SWT1	99	70.775	ENSRNOG00000032258	Swt1	98	70.131	Rattus_norvegicus
ENSCAFG00020015648	SWT1	97	78.872	ENSRBIG00000040630	SWT1	99	83.562	Rhinopithecus_bieti
ENSCAFG00020015648	SWT1	71	78.325	ENSRROG00000028596	SWT1	100	76.012	Rhinopithecus_roxellana
ENSCAFG00020015648	SWT1	99	80.774	ENSSBOG00000028825	SWT1	99	78.228	Saimiri_boliviensis_boliviensis
ENSCAFG00020015648	SWT1	99	61.768	ENSSHAG00000009241	SWT1	99	59.402	Sarcophilus_harrisii
ENSCAFG00020015648	SWT1	66	39.719	ENSSFOG00015004895	swt1	57	39.367	Scleropages_formosus
ENSCAFG00020015648	SWT1	64	34.364	ENSSDUG00000012345	swt1	58	34.364	Seriola_dumerili
ENSCAFG00020015648	SWT1	64	34.192	ENSSLDG00000003821	swt1	58	34.192	Seriola_lalandi_dorsalis
ENSCAFG00020015648	SWT1	61	50.000	ENSSARG00000011524	-	99	50.096	Sorex_araneus
ENSCAFG00020015648	SWT1	82	49.727	ENSSPUG00000003899	SWT1	81	49.729	Sphenodon_punctatus
ENSCAFG00020015648	SWT1	64	32.534	ENSSPAG00000001030	swt1	58	32.534	Stegastes_partitus
ENSCAFG00020015648	SWT1	99	85.142	ENSSSCG00000015569	SWT1	100	82.308	Sus_scrofa
ENSCAFG00020015648	SWT1	65	53.309	ENSTGUG00000003718	-	100	53.584	Taeniopygia_guttata
ENSCAFG00020015648	SWT1	64	34.790	ENSTRUG00000006420	swt1	61	34.904	Takifugu_rubripes
ENSCAFG00020015648	SWT1	54	93.548	ENSTBEG00000016891	-	54	93.548	Tupaia_belangeri
ENSCAFG00020015648	SWT1	100	78.509	ENSTTRG00000005914	SWT1	100	78.180	Tursiops_truncatus
ENSCAFG00020015648	SWT1	100	87.899	ENSUAMG00000020937	SWT1	99	89.697	Ursus_americanus
ENSCAFG00020015648	SWT1	99	88.797	ENSUMAG00000021918	SWT1	100	86.579	Ursus_maritimus
ENSCAFG00020015648	SWT1	92	88.652	ENSVPAG00000011855	SWT1	92	88.652	Vicugna_pacos
ENSCAFG00020015648	SWT1	99	98.817	ENSVVUG00000009182	SWT1	100	96.464	Vulpes_vulpes
ENSCAFG00020015648	SWT1	67	32.680	ENSXMAG00000023472	-	62	32.528	Xiphophorus_maculatus