EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020015876 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 336 bases
Position: chrQKWQ01000163.1:11656847-11657182
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020020001	RRM_1	PF00076.22	6.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020023153	-	336	-	ENSCAFP00020020001	111 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020015876's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020015876's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020015876	-	90	94.000	ENSCAFG00020000852	-	100	92.793

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020015876	-	86	71.875	ENSG00000119705	SLIRP	95	80.556	Homo_sapiens
ENSCAFG00020015876	-	81	52.222	ENSAPOG00000001298	slirp	88	52.222	Acanthochromis_polyacanthus
ENSCAFG00020015876	-	82	81.319	ENSAMEG00000003975	SLIRP	100	81.319	Ailuropoda_melanoleuca
ENSCAFG00020015876	-	82	51.648	ENSACIG00000023083	slirp	88	51.648	Amphilophus_citrinellus
ENSCAFG00020015876	-	82	53.846	ENSAOCG00000006342	slirp	90	53.846	Amphiprion_ocellaris
ENSCAFG00020015876	-	82	53.846	ENSAPEG00000015719	-	91	53.846	Amphiprion_percula
ENSCAFG00020015876	-	82	53.846	ENSAPEG00000015917	slirp	90	53.846	Amphiprion_percula
ENSCAFG00020015876	-	67	55.405	ENSATEG00000013525	slirp	74	55.405	Anabas_testudineus
ENSCAFG00020015876	-	79	52.273	ENSAMXG00000018693	slirp	88	52.273	Astyanax_mexicanus
ENSCAFG00020015876	-	100	73.874	ENSCJAG00000016946	SLIRP	100	73.874	Callithrix_jacchus
ENSCAFG00020015876	-	100	74.775	ENSCCAG00000030130	SLIRP	100	74.775	Cebus_capucinus
ENSCAFG00020015876	-	100	71.171	ENSCATG00000036327	SLIRP	95	77.273	Cercocebus_atys
ENSCAFG00020015876	-	90	73.000	ENSCSAG00000011736	SLIRP	100	73.874	Chlorocebus_sabaeus
ENSCAFG00020015876	-	63	60.000	ENSCPBG00000026327	SLIRP	71	60.000	Chrysemys_picta_bellii
ENSCAFG00020015876	-	72	76.250	ENSCANG00000032892	SLIRP	90	79.545	Colobus_angolensis_palliatus
ENSCAFG00020015876	-	100	68.468	ENSCGRG00001024068	Slirp	100	68.468	Cricetulus_griseus_chok1gshd
ENSCAFG00020015876	-	100	68.468	ENSCGRG00000017440	Slirp	100	68.468	Cricetulus_griseus_crigri
ENSCAFG00020015876	-	81	51.111	ENSCSEG00000015766	slirp	82	51.111	Cynoglossus_semilaevis
ENSCAFG00020015876	-	65	59.722	ENSCVAG00000012504	slirp	71	59.722	Cyprinodon_variegatus
ENSCAFG00020015876	-	68	57.333	ENSDARG00000097753	slirp	72	58.108	Danio_rerio
ENSCAFG00020015876	-	82	71.429	ENSDNOG00000007721	SLIRP	100	65.766	Dasypus_novemcinctus
ENSCAFG00020015876	-	100	71.171	ENSDORG00000012379	Slirp	100	71.171	Dipodomys_ordii
ENSCAFG00020015876	-	90	66.000	ENSETEG00000010345	SLIRP	100	65.766	Echinops_telfairi
ENSCAFG00020015876	-	100	81.982	ENSEASG00005020193	SLIRP	100	81.982	Equus_asinus_asinus
ENSCAFG00020015876	-	96	61.682	ENSEEUG00000007257	SLIRP	99	61.682	Erinaceus_europaeus
ENSCAFG00020015876	-	77	54.651	ENSELUG00000016800	slirp	84	54.651	Esox_lucius
ENSCAFG00020015876	-	79	79.545	ENSFCAG00000036326	SLIRP	90	79.545	Felis_catus
ENSCAFG00020015876	-	64	53.521	ENSFALG00000012583	SLIRP	67	53.521	Ficedula_albicollis
ENSCAFG00020015876	-	97	67.257	ENSFDAG00000008347	SLIRP	100	67.257	Fukomys_damarensis
ENSCAFG00020015876	-	73	50.617	ENSFHEG00000004709	slirp	86	50.617	Fundulus_heteroclitus
ENSCAFG00020015876	-	67	58.108	ENSGMOG00000016948	slirp	71	58.108	Gadus_morhua
ENSCAFG00020015876	-	67	52.632	ENSGALG00000031238	SLIRP	88	48.936	Gallus_gallus
ENSCAFG00020015876	-	84	54.839	ENSGAFG00000010998	slirp	91	54.839	Gambusia_affinis
ENSCAFG00020015876	-	65	56.944	ENSGACG00000020137	slirp	84	56.944	Gasterosteus_aculeatus
ENSCAFG00020015876	-	81	55.556	ENSGAGG00000009953	SLIRP	62	55.556	Gopherus_agassizii
ENSCAFG00020015876	-	86	70.833	ENSGGOG00000011059	-	95	78.409	Gorilla_gorilla
ENSCAFG00020015876	-	100	67.568	ENSHGLG00000018491	SLIRP	100	67.568	Heterocephalus_glaber_female
ENSCAFG00020015876	-	100	67.568	ENSHGLG00100014153	SLIRP	100	67.568	Heterocephalus_glaber_male
ENSCAFG00020015876	-	68	61.039	ENSHCOG00000006795	slirp	78	61.039	Hippocampus_comes
ENSCAFG00020015876	-	80	50.562	ENSIPUG00000010214	SLIRP	87	50.562	Ictalurus_punctatus
ENSCAFG00020015876	-	90	82.000	ENSSTOG00000034316	SLIRP	100	81.982	Ictidomys_tridecemlineatus
ENSCAFG00020015876	-	81	40.000	ENSKMAG00000002038	slirp	87	40.000	Kryptolebias_marmoratus
ENSCAFG00020015876	-	80	50.562	ENSLBEG00000007564	slirp	89	50.562	Labrus_bergylta
ENSCAFG00020015876	-	82	53.846	ENSLACG00000013434	SLIRP	87	53.846	Latimeria_chalumnae
ENSCAFG00020015876	-	90	72.000	ENSMFAG00000042960	SLIRP	95	77.273	Macaca_fascicularis
ENSCAFG00020015876	-	90	72.000	ENSMMUG00000029256	SLIRP	95	78.409	Macaca_mulatta
ENSCAFG00020015876	-	90	72.000	ENSMNEG00000028921	SLIRP	95	77.273	Macaca_nemestrina
ENSCAFG00020015876	-	85	73.404	ENSMLEG00000043644	SLIRP	90	77.273	Mandrillus_leucophaeus
ENSCAFG00020015876	-	81	53.333	ENSMZEG00005004617	slirp	89	53.333	Maylandia_zebra
ENSCAFG00020015876	-	100	73.874	ENSMAUG00000003857	Slirp	100	73.874	Mesocricetus_auratus
ENSCAFG00020015876	-	100	68.468	ENSMICG00000012080	SLIRP	100	68.468	Microcebus_murinus
ENSCAFG00020015876	-	98	74.312	ENSMOCG00000016019	Slirp	97	74.312	Microtus_ochrogaster
ENSCAFG00020015876	-	78	51.724	ENSMMOG00000018268	slirp	87	51.724	Mola_mola
ENSCAFG00020015876	-	63	62.857	ENSMODG00000005207	-	99	62.857	Monodelphis_domestica
ENSCAFG00020015876	-	81	53.333	ENSMALG00000012581	slirp	90	53.333	Monopterus_albus
ENSCAFG00020015876	-	97	75.926	MGP_CAROLIEiJ_G0017995	Slirp	100	75.926	Mus_caroli
ENSCAFG00020015876	-	98	76.147	ENSMUSG00000021040	Slirp	97	76.147	Mus_musculus
ENSCAFG00020015876	-	98	76.147	MGP_SPRETEiJ_G0018840	Slirp	97	76.147	Mus_spretus
ENSCAFG00020015876	-	83	82.609	ENSMLUG00000024998	-	100	76.577	Myotis_lucifugus
ENSCAFG00020015876	-	90	79.000	ENSMLUG00000029544	-	100	76.577	Myotis_lucifugus
ENSCAFG00020015876	-	97	71.296	ENSNGAG00000016363	Slirp	100	71.296	Nannospalax_galili
ENSCAFG00020015876	-	93	64.078	ENSNLEG00000027238	-	93	69.136	Nomascus_leucogenys
ENSCAFG00020015876	-	100	67.568	ENSNLEG00000032459	-	95	72.727	Nomascus_leucogenys
ENSCAFG00020015876	-	98	71.560	ENSODEG00000012580	SLIRP	99	70.330	Octodon_degus
ENSCAFG00020015876	-	81	54.444	ENSONIG00000011692	slirp	89	54.444	Oreochromis_niloticus
ENSCAFG00020015876	-	66	68.493	ENSOANG00000022366	SLIRP	66	68.493	Ornithorhynchus_anatinus
ENSCAFG00020015876	-	81	53.333	ENSORLG00000010761	slirp	68	53.333	Oryzias_latipes
ENSCAFG00020015876	-	81	54.444	ENSORLG00020022188	slirp	88	54.444	Oryzias_latipes_hni
ENSCAFG00020015876	-	100	46.847	ENSORLG00015020171	slirp	99	46.847	Oryzias_latipes_hsok
ENSCAFG00020015876	-	81	54.444	ENSOMEG00000019321	slirp	88	54.444	Oryzias_melastigma
ENSCAFG00020015876	-	86	70.833	ENSPPAG00000040710	-	95	78.409	Pan_paniscus
ENSCAFG00020015876	-	79	79.545	ENSPPRG00000014350	SLIRP	90	79.545	Panthera_pardus
ENSCAFG00020015876	-	79	79.545	ENSPTIG00000014196	SLIRP	90	79.545	Panthera_tigris_altaica
ENSCAFG00020015876	-	85	72.340	ENSPTRG00000030691	SLIRP	95	78.409	Pan_troglodytes
ENSCAFG00020015876	-	100	72.973	ENSPANG00000026323	SLIRP	95	78.409	Papio_anubis
ENSCAFG00020015876	-	61	52.941	ENSPKIG00000008831	slirp	67	52.941	Paramormyrops_kingsleyae
ENSCAFG00020015876	-	61	66.176	ENSPMGG00000010541	slirp	78	66.176	Periophthalmus_magnuspinnatus
ENSCAFG00020015876	-	88	70.707	ENSPEMG00000013234	Slirp	96	67.273	Peromyscus_maniculatus_bairdii
ENSCAFG00020015876	-	61	48.529	ENSPMAG00000009355	slirp	76	48.529	Petromyzon_marinus
ENSCAFG00020015876	-	61	63.235	ENSPCIG00000026842	-	73	63.235	Phascolarctos_cinereus
ENSCAFG00020015876	-	84	52.688	ENSPFOG00000006758	slirp	91	52.688	Poecilia_formosa
ENSCAFG00020015876	-	84	53.763	ENSPLAG00000011140	slirp	91	53.763	Poecilia_latipinna
ENSCAFG00020015876	-	84	52.688	ENSPMEG00000019535	slirp	91	52.688	Poecilia_mexicana
ENSCAFG00020015876	-	84	52.688	ENSPREG00000011673	slirp	91	52.688	Poecilia_reticulata
ENSCAFG00020015876	-	88	69.388	ENSPPYG00000006030	SLIRP	97	69.725	Pongo_abelii
ENSCAFG00020015876	-	100	69.369	ENSPCOG00000015159	SLIRP	100	69.369	Propithecus_coquereli
ENSCAFG00020015876	-	81	58.889	ENSPNAG00000008633	slirp	90	58.889	Pygocentrus_nattereri
ENSCAFG00020015876	-	90	75.000	ENSRBIG00000032222	-	100	75.676	Rhinopithecus_bieti
ENSCAFG00020015876	-	69	77.922	ENSRBIG00000032998	-	81	78.409	Rhinopithecus_bieti
ENSCAFG00020015876	-	88	72.449	ENSRBIG00000035817	-	100	73.394	Rhinopithecus_bieti
ENSCAFG00020015876	-	68	78.667	ENSRBIG00000031396	-	86	79.070	Rhinopithecus_bieti
ENSCAFG00020015876	-	83	73.913	ENSRROG00000041312	-	99	74.757	Rhinopithecus_roxellana
ENSCAFG00020015876	-	90	74.000	ENSRROG00000036656	-	100	74.775	Rhinopithecus_roxellana
ENSCAFG00020015876	-	69	77.922	ENSRROG00000017133	-	92	78.409	Rhinopithecus_roxellana
ENSCAFG00020015876	-	68	80.000	ENSRROG00000035604	-	86	80.233	Rhinopithecus_roxellana
ENSCAFG00020015876	-	79	77.273	ENSSBOG00000020014	SLIRP	95	77.273	Saimiri_boliviensis_boliviensis
ENSCAFG00020015876	-	69	59.740	ENSSFOG00015011165	slirp	78	59.740	Scleropages_formosus
ENSCAFG00020015876	-	78	43.678	ENSSMAG00000012930	slirp	85	43.678	Scophthalmus_maximus
ENSCAFG00020015876	-	80	56.180	ENSSDUG00000021883	slirp	59	56.180	Seriola_dumerili
ENSCAFG00020015876	-	80	56.180	ENSSLDG00000023136	slirp	79	56.180	Seriola_lalandi_dorsalis
ENSCAFG00020015876	-	65	54.167	ENSSPUG00000009346	SLIRP	73	54.167	Sphenodon_punctatus
ENSCAFG00020015876	-	67	55.405	ENSSPAG00000013477	slirp	74	55.405	Stegastes_partitus
ENSCAFG00020015876	-	100	75.676	ENSSSCG00000028167	SLIRP	100	75.676	Sus_scrofa
ENSCAFG00020015876	-	64	52.113	ENSTGUG00000012337	SLIRP	84	47.253	Taeniopygia_guttata
ENSCAFG00020015876	-	80	50.000	ENSTRUG00000020127	slirp	88	50.000	Takifugu_rubripes
ENSCAFG00020015876	-	100	81.982	ENSUAMG00000022445	SLIRP	100	81.982	Ursus_americanus
ENSCAFG00020015876	-	100	82.883	ENSUMAG00000007166	SLIRP	100	82.883	Ursus_maritimus
ENSCAFG00020015876	-	100	74.775	ENSVPAG00000001781	SLIRP	100	74.775	Vicugna_pacos
ENSCAFG00020015876	-	86	92.708	ENSVVUG00000004436	SLIRP	100	90.090	Vulpes_vulpes
ENSCAFG00020015876	-	63	60.000	ENSXETG00000030343	SLIRP	79	60.000	Xenopus_tropicalis
ENSCAFG00020015876	-	84	51.613	ENSXCOG00000009422	slirp	91	51.613	Xiphophorus_couchianus
ENSCAFG00020015876	-	84	52.688	ENSXMAG00000015655	slirp	91	52.688	Xiphophorus_maculatus