EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020015914 (Gene tree)
Gene ID: -
Gene Symbol: SNRPD1
Alias: HsT2456|SNRPD|Sm-D1
Full Name: small nuclear ribonucleoprotein D1 polypeptide
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 27550 bases
Position: chrQKWQ01001577.1:63540137-63567686
Accession: 11158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020020045	LSM	PF01423.22	1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020023204	SNRPD1-201	387	-	ENSCAFP00020020045	128 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020015914's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020015914's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020015914	SNRPD1	58	31.081	ENSCAFG00020008920	LSM10	60	31.081

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020015914	SNRPD1	74	100.000	ENSG00000167088	SNRPD1	80	100.000	Homo_sapiens
ENSCAFG00020015914	SNRPD1	74	95.789	ENSAPOG00000019446	snrpd1	52	95.789	Acanthochromis_polyacanthus
ENSCAFG00020015914	SNRPD1	71	100.000	ENSAMEG00000002576	SNRPD1	78	100.000	Ailuropoda_melanoleuca
ENSCAFG00020015914	SNRPD1	69	95.455	ENSACIG00000011263	snrpd1	79	95.455	Amphilophus_citrinellus
ENSCAFG00020015914	SNRPD1	74	95.789	ENSAOCG00000007406	snrpd1	80	95.789	Amphiprion_ocellaris
ENSCAFG00020015914	SNRPD1	69	95.455	ENSAPEG00000012539	SNRPD1	79	95.455	Amphiprion_percula
ENSCAFG00020015914	SNRPD1	74	90.526	ENSAPEG00000014961	snrpd1	79	90.526	Amphiprion_percula
ENSCAFG00020015914	SNRPD1	74	95.789	ENSATEG00000014399	snrpd1	80	95.789	Anabas_testudineus
ENSCAFG00020015914	SNRPD1	71	100.000	ENSAPLG00000012256	SNRPD1	76	100.000	Anas_platyrhynchos
ENSCAFG00020015914	SNRPD1	74	100.000	ENSACAG00000006364	SNRPD1	80	100.000	Anolis_carolinensis
ENSCAFG00020015914	SNRPD1	74	100.000	ENSANAG00000025641	SNRPD1	80	100.000	Aotus_nancymaae
ENSCAFG00020015914	SNRPD1	69	95.455	ENSACLG00000017406	snrpd1	79	95.455	Astatotilapia_calliptera
ENSCAFG00020015914	SNRPD1	74	96.842	ENSAMXG00000004589	snrpd1	80	96.842	Astyanax_mexicanus
ENSCAFG00020015914	SNRPD1	74	95.789	ENSBTAG00000047266	-	80	95.789	Bos_taurus
ENSCAFG00020015914	SNRPD1	72	95.652	ENSBTAG00000055316	-	79	95.652	Bos_taurus
ENSCAFG00020015914	SNRPD1	74	100.000	ENSBTAG00000008292	SNRPD1	80	100.000	Bos_taurus
ENSCAFG00020015914	SNRPD1	74	97.895	ENSBTAG00000012376	-	71	97.895	Bos_taurus
ENSCAFG00020015914	SNRPD1	69	80.682	WBGene00004916	snr-3	75	76.596	Caenorhabditis_elegans
ENSCAFG00020015914	SNRPD1	74	100.000	ENSCJAG00000042955	SNRPD1	80	100.000	Callithrix_jacchus
ENSCAFG00020015914	SNRPD1	74	100.000	ENSCAFG00000018247	SNRPD1	80	100.000	Canis_familiaris
ENSCAFG00020015914	SNRPD1	73	98.925	ENSCHIG00000005557	SNRPD1	78	98.925	Capra_hircus
ENSCAFG00020015914	SNRPD1	74	100.000	ENSTSYG00000030028	SNRPD1	80	100.000	Carlito_syrichta
ENSCAFG00020015914	SNRPD1	71	98.901	ENSCAPG00000008103	SNRPD1	78	98.901	Cavia_aperea
ENSCAFG00020015914	SNRPD1	74	100.000	ENSCPOG00000004679	SNRPD1	80	100.000	Cavia_porcellus
ENSCAFG00020015914	SNRPD1	74	100.000	ENSCCAG00000032658	SNRPD1	80	100.000	Cebus_capucinus
ENSCAFG00020015914	SNRPD1	74	95.789	ENSCCAG00000016652	-	80	95.789	Cebus_capucinus
ENSCAFG00020015914	SNRPD1	74	95.789	ENSCCAG00000005390	-	80	95.789	Cebus_capucinus
ENSCAFG00020015914	SNRPD1	74	98.947	ENSCCAG00000020611	-	80	98.947	Cebus_capucinus
ENSCAFG00020015914	SNRPD1	74	100.000	ENSCATG00000039978	SNRPD1	80	100.000	Cercocebus_atys
ENSCAFG00020015914	SNRPD1	74	100.000	ENSCLAG00000008691	SNRPD1	80	100.000	Chinchilla_lanigera
ENSCAFG00020015914	SNRPD1	74	100.000	ENSCSAG00000017654	SNRPD1	80	100.000	Chlorocebus_sabaeus
ENSCAFG00020015914	SNRPD1	74	100.000	ENSCPBG00000023143	SNRPD1	80	100.000	Chrysemys_picta_bellii
ENSCAFG00020015914	SNRPD1	67	87.209	ENSCING00000024100	-	69	87.209	Ciona_intestinalis
ENSCAFG00020015914	SNRPD1	68	85.057	ENSCSAVG00000004578	-	70	85.057	Ciona_savignyi
ENSCAFG00020015914	SNRPD1	74	100.000	ENSCGRG00001021055	-	80	100.000	Cricetulus_griseus_chok1gshd
ENSCAFG00020015914	SNRPD1	74	74.737	ENSCGRG00001009945	-	98	67.890	Cricetulus_griseus_chok1gshd
ENSCAFG00020015914	SNRPD1	74	100.000	ENSCGRG00000000490	-	80	100.000	Cricetulus_griseus_crigri
ENSCAFG00020015914	SNRPD1	74	74.737	ENSCGRG00000006224	-	98	67.890	Cricetulus_griseus_crigri
ENSCAFG00020015914	SNRPD1	74	94.737	ENSCSEG00000018141	snrpd1	80	94.737	Cynoglossus_semilaevis
ENSCAFG00020015914	SNRPD1	74	95.789	ENSCVAG00000000534	snrpd1	80	95.789	Cyprinodon_variegatus
ENSCAFG00020015914	SNRPD1	74	96.842	ENSDARG00000011648	snrpd1	95	96.667	Danio_rerio
ENSCAFG00020015914	SNRPD1	74	100.000	ENSDNOG00000040310	SNRPD1	80	100.000	Dasypus_novemcinctus
ENSCAFG00020015914	SNRPD1	74	100.000	ENSDORG00000008349	Snrpd1	80	100.000	Dipodomys_ordii
ENSCAFG00020015914	SNRPD1	73	82.979	FBgn0261933	SmD1	90	73.214	Drosophila_melanogaster
ENSCAFG00020015914	SNRPD1	50	100.000	ENSETEG00000011689	SNRPD1	54	100.000	Echinops_telfairi
ENSCAFG00020015914	SNRPD1	74	91.579	ENSEBUG00000003170	snrpd1	93	91.489	Eptatretus_burgeri
ENSCAFG00020015914	SNRPD1	69	100.000	ENSEASG00005002433	SNRPD1	79	100.000	Equus_asinus_asinus
ENSCAFG00020015914	SNRPD1	69	100.000	ENSECAG00000014373	SNRPD1	79	100.000	Equus_caballus
ENSCAFG00020015914	SNRPD1	70	100.000	ENSEEUG00000004987	SNRPD1	100	100.000	Erinaceus_europaeus
ENSCAFG00020015914	SNRPD1	73	95.745	ENSELUG00000000088	snrpd1	79	95.745	Esox_lucius
ENSCAFG00020015914	SNRPD1	74	100.000	ENSFCAG00000012352	SNRPD1	80	100.000	Felis_catus
ENSCAFG00020015914	SNRPD1	69	100.000	ENSFALG00000002646	SNRPD1	79	100.000	Ficedula_albicollis
ENSCAFG00020015914	SNRPD1	74	96.842	ENSGMOG00000015607	snrpd1	80	96.842	Gadus_morhua
ENSCAFG00020015914	SNRPD1	74	100.000	ENSGALG00000041334	SNRPD1	80	100.000	Gallus_gallus
ENSCAFG00020015914	SNRPD1	74	95.789	ENSGAFG00000011171	snrpd1	80	95.789	Gambusia_affinis
ENSCAFG00020015914	SNRPD1	74	96.842	ENSGACG00000005201	SNRPD1	80	96.842	Gasterosteus_aculeatus
ENSCAFG00020015914	SNRPD1	74	100.000	ENSGAGG00000011197	SNRPD1	80	100.000	Gopherus_agassizii
ENSCAFG00020015914	SNRPD1	74	94.737	ENSGGOG00000026706	-	79	94.737	Gorilla_gorilla
ENSCAFG00020015914	SNRPD1	74	100.000	ENSGGOG00000041053	SNRPD1	80	100.000	Gorilla_gorilla
ENSCAFG00020015914	SNRPD1	74	95.789	ENSHBUG00000003236	snrpd1	80	95.789	Haplochromis_burtoni
ENSCAFG00020015914	SNRPD1	74	100.000	ENSHGLG00000007152	SNRPD1	80	100.000	Heterocephalus_glaber_female
ENSCAFG00020015914	SNRPD1	74	100.000	ENSHGLG00100008618	SNRPD1	80	100.000	Heterocephalus_glaber_male
ENSCAFG00020015914	SNRPD1	74	95.789	ENSIPUG00000003576	snrpd1	80	95.789	Ictalurus_punctatus
ENSCAFG00020015914	SNRPD1	74	100.000	ENSSTOG00000000485	SNRPD1	80	100.000	Ictidomys_tridecemlineatus
ENSCAFG00020015914	SNRPD1	74	100.000	ENSJJAG00000017698	Snrpd1	80	100.000	Jaculus_jaculus
ENSCAFG00020015914	SNRPD1	74	95.789	ENSKMAG00000005987	snrpd1	80	95.789	Kryptolebias_marmoratus
ENSCAFG00020015914	SNRPD1	74	95.789	ENSLBEG00000003327	snrpd1	80	95.789	Labrus_bergylta
ENSCAFG00020015914	SNRPD1	74	100.000	ENSLACG00000001955	SNRPD1	80	100.000	Latimeria_chalumnae
ENSCAFG00020015914	SNRPD1	73	96.774	ENSLOCG00000002003	snrpd1	79	96.774	Lepisosteus_oculatus
ENSCAFG00020015914	SNRPD1	73	97.872	ENSLAFG00000005819	SNRPD1	80	97.872	Loxodonta_africana
ENSCAFG00020015914	SNRPD1	74	100.000	ENSMFAG00000042080	SNRPD1	80	100.000	Macaca_fascicularis
ENSCAFG00020015914	SNRPD1	70	100.000	ENSMMUG00000003992	SNRPD1	77	100.000	Macaca_mulatta
ENSCAFG00020015914	SNRPD1	74	100.000	ENSMNEG00000041296	SNRPD1	80	100.000	Macaca_nemestrina
ENSCAFG00020015914	SNRPD1	74	100.000	ENSMLEG00000028659	SNRPD1	80	100.000	Mandrillus_leucophaeus
ENSCAFG00020015914	SNRPD1	74	95.789	ENSMAMG00000012971	snrpd1	80	95.789	Mastacembelus_armatus
ENSCAFG00020015914	SNRPD1	74	95.789	ENSMZEG00005004685	snrpd1	80	95.789	Maylandia_zebra
ENSCAFG00020015914	SNRPD1	71	100.000	ENSMGAG00000011598	SNRPD1	75	100.000	Meleagris_gallopavo
ENSCAFG00020015914	SNRPD1	74	83.158	ENSMAUG00000016467	-	86	83.158	Mesocricetus_auratus
ENSCAFG00020015914	SNRPD1	70	100.000	ENSMAUG00000006829	-	59	100.000	Mesocricetus_auratus
ENSCAFG00020015914	SNRPD1	74	83.158	ENSMAUG00000016502	-	86	83.158	Mesocricetus_auratus
ENSCAFG00020015914	SNRPD1	74	100.000	ENSMICG00000044066	SNRPD1	80	100.000	Microcebus_murinus
ENSCAFG00020015914	SNRPD1	74	100.000	ENSMOCG00000017367	Snrpd1	80	100.000	Microtus_ochrogaster
ENSCAFG00020015914	SNRPD1	74	95.789	ENSMMOG00000019089	snrpd1	80	95.789	Mola_mola
ENSCAFG00020015914	SNRPD1	74	100.000	ENSMODG00000021487	SNRPD1	80	100.000	Monodelphis_domestica
ENSCAFG00020015914	SNRPD1	74	95.789	ENSMALG00000014459	snrpd1	80	95.789	Monopterus_albus
ENSCAFG00020015914	SNRPD1	74	100.000	MGP_CAROLIEiJ_G0021994	Snrpd1	80	100.000	Mus_caroli
ENSCAFG00020015914	SNRPD1	74	100.000	ENSMUSG00000002477	Snrpd1	80	100.000	Mus_musculus
ENSCAFG00020015914	SNRPD1	74	100.000	MGP_PahariEiJ_G0018731	Snrpd1	80	100.000	Mus_pahari
ENSCAFG00020015914	SNRPD1	74	100.000	MGP_SPRETEiJ_G0022910	Snrpd1	80	100.000	Mus_spretus
ENSCAFG00020015914	SNRPD1	71	100.000	ENSMPUG00000005567	-	78	100.000	Mustela_putorius_furo
ENSCAFG00020015914	SNRPD1	74	98.947	ENSMPUG00000020041	-	80	98.947	Mustela_putorius_furo
ENSCAFG00020015914	SNRPD1	73	98.925	ENSMLUG00000009124	SNRPD1	72	98.925	Myotis_lucifugus
ENSCAFG00020015914	SNRPD1	74	100.000	ENSNGAG00000023946	Snrpd1	80	100.000	Nannospalax_galili
ENSCAFG00020015914	SNRPD1	73	95.745	ENSNBRG00000012119	snrpd1	78	95.745	Neolamprologus_brichardi
ENSCAFG00020015914	SNRPD1	74	96.842	ENSNLEG00000031430	SNRPD1	79	96.842	Nomascus_leucogenys
ENSCAFG00020015914	SNRPD1	74	100.000	ENSODEG00000005764	SNRPD1	80	100.000	Octodon_degus
ENSCAFG00020015914	SNRPD1	74	95.789	ENSONIG00000002486	snrpd1	80	95.789	Oreochromis_niloticus
ENSCAFG00020015914	SNRPD1	70	90.000	ENSOANG00000004638	-	76	90.000	Ornithorhynchus_anatinus
ENSCAFG00020015914	SNRPD1	71	100.000	ENSOCUG00000023761	-	78	100.000	Oryctolagus_cuniculus
ENSCAFG00020015914	SNRPD1	74	98.947	ENSOCUG00000014399	-	80	98.947	Oryctolagus_cuniculus
ENSCAFG00020015914	SNRPD1	69	95.455	ENSORLG00000012516	snrpd1	79	95.455	Oryzias_latipes
ENSCAFG00020015914	SNRPD1	74	95.789	ENSORLG00020005743	snrpd1	80	95.789	Oryzias_latipes_hni
ENSCAFG00020015914	SNRPD1	74	95.789	ENSORLG00015013402	snrpd1	80	95.789	Oryzias_latipes_hsok
ENSCAFG00020015914	SNRPD1	74	95.789	ENSOMEG00000011571	snrpd1	80	95.789	Oryzias_melastigma
ENSCAFG00020015914	SNRPD1	71	100.000	ENSOGAG00000007833	SNRPD1	76	100.000	Otolemur_garnettii
ENSCAFG00020015914	SNRPD1	74	100.000	ENSOARG00000003413	-	71	100.000	Ovis_aries
ENSCAFG00020015914	SNRPD1	74	100.000	ENSPPAG00000042593	SNRPD1	80	100.000	Pan_paniscus
ENSCAFG00020015914	SNRPD1	74	100.000	ENSPPRG00000002399	SNRPD1	80	100.000	Panthera_pardus
ENSCAFG00020015914	SNRPD1	74	67.368	ENSPPRG00000005009	-	74	67.368	Panthera_pardus
ENSCAFG00020015914	SNRPD1	70	100.000	ENSPTIG00000013206	SNRPD1	79	100.000	Panthera_tigris_altaica
ENSCAFG00020015914	SNRPD1	74	100.000	ENSPTRG00000009909	SNRPD1	80	100.000	Pan_troglodytes
ENSCAFG00020015914	SNRPD1	74	93.684	ENSPTRG00000050159	-	81	93.684	Pan_troglodytes
ENSCAFG00020015914	SNRPD1	74	100.000	ENSPANG00000023478	SNRPD1	80	100.000	Papio_anubis
ENSCAFG00020015914	SNRPD1	74	96.842	ENSPKIG00000003985	SNRPD1	80	96.842	Paramormyrops_kingsleyae
ENSCAFG00020015914	SNRPD1	69	95.455	ENSPKIG00000021610	snrpd1	79	95.455	Paramormyrops_kingsleyae
ENSCAFG00020015914	SNRPD1	74	95.789	ENSPMGG00000001862	snrpd1	80	95.789	Periophthalmus_magnuspinnatus
ENSCAFG00020015914	SNRPD1	74	100.000	ENSPEMG00000014773	-	80	100.000	Peromyscus_maniculatus_bairdii
ENSCAFG00020015914	SNRPD1	73	83.333	ENSPMAG00000003938	-	80	82.474	Petromyzon_marinus
ENSCAFG00020015914	SNRPD1	74	100.000	ENSPCIG00000020320	SNRPD1	80	100.000	Phascolarctos_cinereus
ENSCAFG00020015914	SNRPD1	74	95.789	ENSPFOG00000012448	SNRPD1	84	95.789	Poecilia_formosa
ENSCAFG00020015914	SNRPD1	74	95.789	ENSPLAG00000006738	snrpd1	84	95.789	Poecilia_latipinna
ENSCAFG00020015914	SNRPD1	74	95.789	ENSPMEG00000021942	snrpd1	84	95.789	Poecilia_mexicana
ENSCAFG00020015914	SNRPD1	74	95.789	ENSPREG00000007094	snrpd1	80	95.789	Poecilia_reticulata
ENSCAFG00020015914	SNRPD1	74	100.000	ENSPPYG00000025874	SNRPD1	80	100.000	Pongo_abelii
ENSCAFG00020015914	SNRPD1	74	100.000	ENSPCOG00000013327	SNRPD1	80	100.000	Propithecus_coquereli
ENSCAFG00020015914	SNRPD1	74	100.000	ENSPVAG00000005511	SNRPD1	64	100.000	Pteropus_vampyrus
ENSCAFG00020015914	SNRPD1	74	95.789	ENSPNAG00000017824	snrpd1	80	95.789	Pygocentrus_nattereri
ENSCAFG00020015914	SNRPD1	74	100.000	ENSRNOG00000013714	Snrpd1	80	100.000	Rattus_norvegicus
ENSCAFG00020015914	SNRPD1	74	100.000	ENSRBIG00000022996	SNRPD1	80	100.000	Rhinopithecus_bieti
ENSCAFG00020015914	SNRPD1	74	100.000	ENSRROG00000027640	SNRPD1	80	100.000	Rhinopithecus_roxellana
ENSCAFG00020015914	SNRPD1	74	100.000	ENSSBOG00000020998	SNRPD1	80	100.000	Saimiri_boliviensis_boliviensis
ENSCAFG00020015914	SNRPD1	74	100.000	ENSSHAG00000011791	SNRPD1	80	100.000	Sarcophilus_harrisii
ENSCAFG00020015914	SNRPD1	88	82.301	ENSSFOG00015022253	-	80	94.737	Scleropages_formosus
ENSCAFG00020015914	SNRPD1	74	94.737	ENSSFOG00015008809	-	80	94.737	Scleropages_formosus
ENSCAFG00020015914	SNRPD1	74	94.737	ENSSMAG00000008765	snrpd1	80	94.737	Scophthalmus_maximus
ENSCAFG00020015914	SNRPD1	71	94.505	ENSSDUG00000010521	snrpd1	78	93.478	Seriola_dumerili
ENSCAFG00020015914	SNRPD1	74	95.789	ENSSLDG00000011858	snrpd1	80	95.789	Seriola_lalandi_dorsalis
ENSCAFG00020015914	SNRPD1	52	100.000	ENSSARG00000004271	SNRPD1	100	100.000	Sorex_araneus
ENSCAFG00020015914	SNRPD1	74	100.000	ENSSPUG00000002824	SNRPD1	80	100.000	Sphenodon_punctatus
ENSCAFG00020015914	SNRPD1	69	95.455	ENSSPAG00000015229	snrpd1	79	95.455	Stegastes_partitus
ENSCAFG00020015914	SNRPD1	74	100.000	ENSSSCG00000003701	SNRPD1	80	100.000	Sus_scrofa
ENSCAFG00020015914	SNRPD1	71	100.000	ENSTGUG00000005095	SNRPD1	76	100.000	Taeniopygia_guttata
ENSCAFG00020015914	SNRPD1	69	95.455	ENSTRUG00000008977	snrpd1	79	95.455	Takifugu_rubripes
ENSCAFG00020015914	SNRPD1	62	89.873	ENSTNIG00000001224	snrpd1	76	89.873	Tetraodon_nigroviridis
ENSCAFG00020015914	SNRPD1	50	100.000	ENSTBEG00000013776	SNRPD1	73	100.000	Tupaia_belangeri
ENSCAFG00020015914	SNRPD1	71	100.000	ENSTTRG00000002654	SNRPD1	79	100.000	Tursiops_truncatus
ENSCAFG00020015914	SNRPD1	73	100.000	ENSUAMG00000013431	SNRPD1	94	100.000	Ursus_americanus
ENSCAFG00020015914	SNRPD1	74	100.000	ENSUMAG00000019740	SNRPD1	80	100.000	Ursus_maritimus
ENSCAFG00020015914	SNRPD1	74	100.000	ENSVPAG00000010056	SNRPD1	64	100.000	Vicugna_pacos
ENSCAFG00020015914	SNRPD1	69	100.000	ENSVVUG00000004009	SNRPD1	79	100.000	Vulpes_vulpes
ENSCAFG00020015914	SNRPD1	74	97.895	ENSXETG00000027354	snrpd1	80	97.895	Xenopus_tropicalis
ENSCAFG00020015914	SNRPD1	74	95.789	ENSXCOG00000020108	snrpd1	80	95.789	Xiphophorus_couchianus
ENSCAFG00020015914	SNRPD1	74	95.789	ENSXMAG00000003368	snrpd1	80	95.789	Xiphophorus_maculatus