EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020016049 (Gene tree)
Gene ID: 112678548
Gene Symbol: -
Alias: -
Full Name: ribosome biogenesis regulatory protein homolog
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 1098 bases
Position: chrQKWQ01000163.1:16138341-16139438
Accession: 112651256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020020223	RRS1	PF04939.12	4.4e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020023413	-	1098	-	ENSCAFP00020020223	365 (aa)	XP_025290071	UPI00004A6F1C

Gene Model

Click here to download ENSCAFG00020016049's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020016049's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020016049	-	100	100.000	ENSCAFG00020020365	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020016049	-	100	94.247	ENSG00000179041	RRS1	100	94.247	Homo_sapiens
ENSCAFG00020016049	-	87	66.352	ENSATEG00000011743	rrs1	92	65.432	Anabas_testudineus
ENSCAFG00020016049	-	100	92.603	ENSANAG00000018116	RRS1	100	92.603	Aotus_nancymaae
ENSCAFG00020016049	-	84	66.230	ENSAMXG00000037893	rrs1	79	66.230	Astyanax_mexicanus
ENSCAFG00020016049	-	100	93.973	ENSBTAG00000016716	RRS1	100	93.973	Bos_taurus
ENSCAFG00020016049	-	70	44.528	WBGene00007617	rrbs-1	78	44.528	Caenorhabditis_elegans
ENSCAFG00020016049	-	100	92.603	ENSCJAG00000022034	RRS1	100	92.603	Callithrix_jacchus
ENSCAFG00020016049	-	100	100.000	ENSCAFG00000007313	RRS1	100	100.000	Canis_familiaris
ENSCAFG00020016049	-	100	94.247	ENSCHIG00000009141	RRS1	100	94.247	Capra_hircus
ENSCAFG00020016049	-	90	89.091	ENSCPOG00000000647	RRS1	99	89.356	Cavia_porcellus
ENSCAFG00020016049	-	100	92.055	ENSCCAG00000032186	RRS1	100	92.055	Cebus_capucinus
ENSCAFG00020016049	-	100	93.699	ENSCATG00000016944	RRS1	100	93.699	Cercocebus_atys
ENSCAFG00020016049	-	100	92.877	ENSCSAG00000018552	RRS1	100	92.877	Chlorocebus_sabaeus
ENSCAFG00020016049	-	87	95.899	ENSCHOG00000002455	RRS1	100	94.247	Choloepus_hoffmanni
ENSCAFG00020016049	-	87	64.615	ENSCPBG00000021374	RRS1	91	64.688	Chrysemys_picta_bellii
ENSCAFG00020016049	-	86	47.785	ENSCING00000002177	-	89	49.655	Ciona_intestinalis
ENSCAFG00020016049	-	87	47.368	ENSCSAVG00000011819	-	89	49.315	Ciona_savignyi
ENSCAFG00020016049	-	100	93.151	ENSCANG00000012718	RRS1	100	93.151	Colobus_angolensis_palliatus
ENSCAFG00020016049	-	100	87.397	ENSCGRG00001002391	-	100	87.397	Cricetulus_griseus_chok1gshd
ENSCAFG00020016049	-	97	84.507	ENSCGRG00001015575	-	99	84.225	Cricetulus_griseus_chok1gshd
ENSCAFG00020016049	-	82	55.482	ENSCSEG00000014750	rrs1	90	54.128	Cynoglossus_semilaevis
ENSCAFG00020016049	-	84	56.678	ENSCVAG00000017878	rrs1	98	52.222	Cyprinodon_variegatus
ENSCAFG00020016049	-	82	66.333	ENSDARG00000003941	rrs1	90	64.537	Danio_rerio
ENSCAFG00020016049	-	100	92.055	ENSDNOG00000017900	RRS1	99	92.055	Dasypus_novemcinctus
ENSCAFG00020016049	-	61	93.213	ENSDORG00000026331	Rrs1	100	87.732	Dipodomys_ordii
ENSCAFG00020016049	-	79	44.407	FBgn0052409	CG32409	84	44.407	Drosophila_melanogaster
ENSCAFG00020016049	-	55	89.055	ENSETEG00000000935	-	55	89.055	Echinops_telfairi
ENSCAFG00020016049	-	84	53.922	ENSEBUG00000013506	rrs1	95	55.052	Eptatretus_burgeri
ENSCAFG00020016049	-	100	95.342	ENSEASG00005001691	RRS1	100	95.342	Equus_asinus_asinus
ENSCAFG00020016049	-	100	86.575	ENSECAG00000004492	RRS1	100	87.397	Equus_caballus
ENSCAFG00020016049	-	100	90.959	ENSEEUG00000013719	RRS1	100	90.959	Erinaceus_europaeus
ENSCAFG00020016049	-	100	96.164	ENSFCAG00000014332	RRS1	100	96.164	Felis_catus
ENSCAFG00020016049	-	80	64.570	ENSGALG00000030890	RRS1	90	64.286	Gallus_gallus
ENSCAFG00020016049	-	86	62.857	ENSGACG00000002969	rrs1	87	63.782	Gasterosteus_aculeatus
ENSCAFG00020016049	-	87	63.914	ENSGAGG00000023718	RRS1	88	64.375	Gopherus_agassizii
ENSCAFG00020016049	-	100	94.247	ENSGGOG00000026663	RRS1	100	94.247	Gorilla_gorilla
ENSCAFG00020016049	-	100	90.685	ENSHGLG00000021423	RRS1	100	90.685	Heterocephalus_glaber_female
ENSCAFG00020016049	-	100	90.685	ENSHGLG00100020640	RRS1	100	90.685	Heterocephalus_glaber_male
ENSCAFG00020016049	-	98	62.396	ENSHCOG00000015358	rrs1	84	67.101	Hippocampus_comes
ENSCAFG00020016049	-	82	65.101	ENSIPUG00000014412	rrs1	89	64.423	Ictalurus_punctatus
ENSCAFG00020016049	-	100	93.151	ENSSTOG00000026310	RRS1	100	93.151	Ictidomys_tridecemlineatus
ENSCAFG00020016049	-	76	81.720	ENSJJAG00000020395	-	100	71.739	Jaculus_jaculus
ENSCAFG00020016049	-	84	90.260	ENSJJAG00000011507	-	100	88.011	Jaculus_jaculus
ENSCAFG00020016049	-	82	65.116	ENSKMAG00000008238	rrs1	88	65.116	Kryptolebias_marmoratus
ENSCAFG00020016049	-	85	66.452	ENSLACG00000004058	RRS1	95	66.454	Latimeria_chalumnae
ENSCAFG00020016049	-	84	68.525	ENSLOCG00000017812	rrs1	91	67.732	Lepisosteus_oculatus
ENSCAFG00020016049	-	87	95.584	ENSLAFG00000015405	RRS1	99	93.425	Loxodonta_africana
ENSCAFG00020016049	-	100	93.151	ENSMFAG00000042747	RRS1	100	93.151	Macaca_fascicularis
ENSCAFG00020016049	-	100	93.151	ENSMMUG00000000886	RRS1	100	93.151	Macaca_mulatta
ENSCAFG00020016049	-	100	93.151	ENSMNEG00000011696	RRS1	100	93.151	Macaca_nemestrina
ENSCAFG00020016049	-	100	93.699	ENSMLEG00000004794	RRS1	100	93.699	Mandrillus_leucophaeus
ENSCAFG00020016049	-	82	67.110	ENSMZEG00005004349	RRS1	85	66.775	Maylandia_zebra
ENSCAFG00020016049	-	100	89.041	ENSMAUG00000005392	Rrs1	100	89.041	Mesocricetus_auratus
ENSCAFG00020016049	-	95	90.145	ENSMOCG00000015862	Rrs1	87	84.551	Microtus_ochrogaster
ENSCAFG00020016049	-	90	79.573	ENSMODG00000024952	RRS1	99	74.933	Monodelphis_domestica
ENSCAFG00020016049	-	100	88.493	MGP_CAROLIEiJ_G0013936	Rrs1	100	88.219	Mus_caroli
ENSCAFG00020016049	-	100	88.493	ENSMUSG00000061024	Rrs1	100	88.493	Mus_musculus
ENSCAFG00020016049	-	100	88.767	MGP_PahariEiJ_G0023883	Rrs1	100	88.767	Mus_pahari
ENSCAFG00020016049	-	100	88.767	MGP_SPRETEiJ_G0014739	Rrs1	100	88.767	Mus_spretus
ENSCAFG00020016049	-	100	94.521	ENSMPUG00000018626	RRS1	98	94.521	Mustela_putorius_furo
ENSCAFG00020016049	-	100	89.041	ENSNGAG00000012904	Rrs1	100	89.041	Nannospalax_galili
ENSCAFG00020016049	-	81	92.857	ENSNLEG00000027730	RRS1	96	92.857	Nomascus_leucogenys
ENSCAFG00020016049	-	91	64.072	ENSONIG00000014187	rrs1	88	67.427	Oreochromis_niloticus
ENSCAFG00020016049	-	89	71.646	ENSOANG00000012348	RRS1	97	68.956	Ornithorhynchus_anatinus
ENSCAFG00020016049	-	95	92.486	ENSOCUG00000013490	RRS1	100	90.786	Oryctolagus_cuniculus
ENSCAFG00020016049	-	86	55.556	ENSOMEG00000008525	rrs1	88	55.484	Oryzias_melastigma
ENSCAFG00020016049	-	100	91.507	ENSOGAG00000001085	RRS1	100	91.507	Otolemur_garnettii
ENSCAFG00020016049	-	100	88.767	ENSOARG00000017417	RRS1	98	88.767	Ovis_aries
ENSCAFG00020016049	-	100	93.699	ENSPPAG00000024378	RRS1	100	93.699	Pan_paniscus
ENSCAFG00020016049	-	100	96.438	ENSPPRG00000021408	RRS1	100	96.438	Panthera_pardus
ENSCAFG00020016049	-	100	93.425	ENSPTRG00000030988	RRS1	100	93.425	Pan_troglodytes
ENSCAFG00020016049	-	100	67.123	ENSPANG00000035974	RRS1	100	67.397	Papio_anubis
ENSCAFG00020016049	-	82	67.785	ENSPKIG00000007953	rrs1	90	66.990	Paramormyrops_kingsleyae
ENSCAFG00020016049	-	100	88.767	ENSPEMG00000014427	Rrs1	100	88.767	Peromyscus_maniculatus_bairdii
ENSCAFG00020016049	-	82	61.130	ENSPMAG00000006513	rrs1	81	60.129	Petromyzon_marinus
ENSCAFG00020016049	-	84	81.494	ENSPCIG00000026695	RRS1	100	76.359	Phascolarctos_cinereus
ENSCAFG00020016049	-	82	67.893	ENSPFOG00000020722	rrs1	96	67.203	Poecilia_formosa
ENSCAFG00020016049	-	83	57.377	ENSPREG00000019960	rrs1	98	52.044	Poecilia_reticulata
ENSCAFG00020016049	-	81	94.613	ENSPPYG00000018637	RRS1	100	94.613	Pongo_abelii
ENSCAFG00020016049	-	90	93.636	ENSPCAG00000009115	RRS1	100	92.603	Procavia_capensis
ENSCAFG00020016049	-	80	66.438	ENSPNAG00000021707	rrs1	86	66.118	Pygocentrus_nattereri
ENSCAFG00020016049	-	100	89.589	ENSRNOG00000007240	Rrs1	100	89.589	Rattus_norvegicus
ENSCAFG00020016049	-	100	93.151	ENSRBIG00000009132	RRS1	100	93.151	Rhinopithecus_bieti
ENSCAFG00020016049	-	100	93.151	ENSRROG00000013472	RRS1	100	93.151	Rhinopithecus_roxellana
ENSCAFG00020016049	-	100	89.041	ENSSBOG00000011006	-	100	88.219	Saimiri_boliviensis_boliviensis
ENSCAFG00020016049	-	100	88.219	ENSSBOG00000012639	-	100	88.493	Saimiri_boliviensis_boliviensis
ENSCAFG00020016049	-	80	53.925	ENSSFOG00015015772	rrs1	85	53.443	Scleropages_formosus
ENSCAFG00020016049	-	81	67.230	ENSSMAG00000015226	rrs1	87	64.984	Scophthalmus_maximus
ENSCAFG00020016049	-	82	88.764	ENSSARG00000006976	RRS1	82	88.764	Sorex_araneus
ENSCAFG00020016049	-	100	95.068	ENSSSCG00000006214	RRS1	100	95.068	Sus_scrofa
ENSCAFG00020016049	-	84	63.636	ENSTRUG00000008796	rrs1	91	64.452	Takifugu_rubripes
ENSCAFG00020016049	-	76	65.942	ENSTNIG00000004026	rrs1	98	60.000	Tetraodon_nigroviridis
ENSCAFG00020016049	-	100	94.247	ENSTBEG00000014752	RRS1	100	94.247	Tupaia_belangeri
ENSCAFG00020016049	-	100	96.986	ENSUAMG00000008502	RRS1	100	96.986	Ursus_americanus
ENSCAFG00020016049	-	100	99.726	ENSVVUG00000018452	RRS1	100	99.726	Vulpes_vulpes
ENSCAFG00020016049	-	82	67.559	ENSXCOG00000009809	rrs1	88	66.881	Xiphophorus_couchianus