EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020016111 (Gene tree)
Gene ID: 112653325
Gene Symbol: BLM
Alias: BS|RECQ2|RECQL3
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 65106 bases
Position: chrQKWQ01000898.1:38620974-38686079
Accession: 112653325
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020020380	HRDC	PF00570.23	5.4e-12	1	1
ENSCAFP00020020374	HRDC	PF00570.23	1e-11	1	1
ENSCAFP00020020369	HRDC	PF00570.23	1e-11	1	1
ENSCAFP00020020375	BDHCT	PF08072.11	1.9e-21	1	1
ENSCAFP00020020374	BDHCT	PF08072.11	2.2e-21	1	1
ENSCAFP00020020369	BDHCT	PF08072.11	2.2e-21	1	1
ENSCAFP00020020380	BDHCT	PF08072.11	1.1e-19	1	1
ENSCAFP00020020380	DEAD	PF00270.29	5.3e-20	1	1
ENSCAFP00020020375	DEAD	PF00270.29	1.3e-19	1	1
ENSCAFP00020020374	DEAD	PF00270.29	1.4e-19	1	1
ENSCAFP00020020369	DEAD	PF00270.29	1.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020023579	BLM-203	3822	-	ENSCAFP00020020375	1273 (aa)	-	-
ENSCAFT00020023576	BLM-202	4218	-	ENSCAFP00020020374	1405 (aa)	-	-
ENSCAFT00020023571	BLM-201	4263	XM_025437359	ENSCAFP00020020369	1420 (aa)	XP_025293144	UPI000DC6CB59
ENSCAFT00020023583	BLM-204	2490	-	ENSCAFP00020020380	829 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020016111's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020016111's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020016111	BLM	64	39.033	ENSCAFG00020007872	RECQL	79	39.033

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020016111	BLM	94	92.476	ENSG00000197299	BLM	100	82.511	Homo_sapiens
ENSCAFG00020016111	BLM	87	66.897	ENSAPOG00000017966	blm	58	64.286	Acanthochromis_polyacanthus
ENSCAFG00020016111	BLM	100	90.419	ENSAMEG00000013843	BLM	100	89.711	Ailuropoda_melanoleuca
ENSCAFG00020016111	BLM	89	66.441	ENSACIG00000023762	blm	65	63.868	Amphilophus_citrinellus
ENSCAFG00020016111	BLM	87	67.125	ENSAOCG00000003318	blm	84	64.504	Amphiprion_ocellaris
ENSCAFG00020016111	BLM	88	67.078	ENSAPEG00000018105	blm	84	64.504	Amphiprion_percula
ENSCAFG00020016111	BLM	83	73.770	ENSATEG00000006421	blm	84	65.394	Anabas_testudineus
ENSCAFG00020016111	BLM	94	74.513	ENSAPLG00000006878	BLM	83	68.347	Anas_platyrhynchos
ENSCAFG00020016111	BLM	87	74.167	ENSACAG00000014275	BLM	75	80.612	Anolis_carolinensis
ENSCAFG00020016111	BLM	94	91.655	ENSANAG00000038415	BLM	100	82.102	Aotus_nancymaae
ENSCAFG00020016111	BLM	83	74.227	ENSACLG00000020354	blm	75	74.227	Astatotilapia_calliptera
ENSCAFG00020016111	BLM	81	70.896	ENSAMXG00000016970	blm	59	61.520	Astyanax_mexicanus
ENSCAFG00020016111	BLM	81	96.316	ENSBTAG00000020301	BLM	100	84.262	Bos_taurus
ENSCAFG00020016111	BLM	77	40.059	WBGene00001865	him-6	66	40.059	Caenorhabditis_elegans
ENSCAFG00020016111	BLM	94	90.761	ENSCJAG00000009803	BLM	100	81.664	Callithrix_jacchus
ENSCAFG00020016111	BLM	100	100.000	ENSCAFG00000012385	BLM	100	99.930	Canis_familiaris
ENSCAFG00020016111	BLM	93	93.278	ENSCHIG00000010329	BLM	100	84.590	Capra_hircus
ENSCAFG00020016111	BLM	94	90.834	ENSTSYG00000012368	BLM	100	80.902	Carlito_syrichta
ENSCAFG00020016111	BLM	86	92.238	ENSCAPG00000017976	BLM	100	84.097	Cavia_aperea
ENSCAFG00020016111	BLM	93	89.452	ENSCPOG00000001761	BLM	100	75.952	Cavia_porcellus
ENSCAFG00020016111	BLM	94	91.655	ENSCCAG00000023069	BLM	100	81.534	Cebus_capucinus
ENSCAFG00020016111	BLM	94	91.518	ENSCATG00000040609	BLM	92	94.609	Cercocebus_atys
ENSCAFG00020016111	BLM	93	90.548	ENSCLAG00000012111	BLM	100	77.167	Chinchilla_lanigera
ENSCAFG00020016111	BLM	94	91.655	ENSCSAG00000017040	BLM	100	82.022	Chlorocebus_sabaeus
ENSCAFG00020016111	BLM	86	95.349	ENSCHOG00000006255	BLM	80	95.349	Choloepus_hoffmanni
ENSCAFG00020016111	BLM	95	72.386	ENSCPBG00000025000	BLM	99	58.479	Chrysemys_picta_bellii
ENSCAFG00020016111	BLM	59	40.164	ENSCING00000021036	-	85	40.164	Ciona_intestinalis
ENSCAFG00020016111	BLM	65	37.385	ENSCSAVG00000007521	-	89	37.291	Ciona_savignyi
ENSCAFG00020016111	BLM	78	90.055	ENSCANG00000034808	BLM	100	90.055	Colobus_angolensis_palliatus
ENSCAFG00020016111	BLM	95	89.744	ENSCGRG00001024897	Blm	100	77.129	Cricetulus_griseus_chok1gshd
ENSCAFG00020016111	BLM	73	72.029	ENSCGRG00000016261	Blm	97	72.518	Cricetulus_griseus_crigri
ENSCAFG00020016111	BLM	87	67.493	ENSCSEG00000013483	blm	85	51.959	Cynoglossus_semilaevis
ENSCAFG00020016111	BLM	88	73.566	ENSDARG00000077089	blm	76	73.566	Danio_rerio
ENSCAFG00020016111	BLM	94	90.561	ENSDNOG00000010159	BLM	99	79.609	Dasypus_novemcinctus
ENSCAFG00020016111	BLM	89	89.009	ENSDORG00000011033	Blm	100	80.191	Dipodomys_ordii
ENSCAFG00020016111	BLM	85	42.120	FBgn0002906	Blm	51	41.313	Drosophila_melanogaster
ENSCAFG00020016111	BLM	85	84.874	ENSETEG00000015019	BLM	82	85.000	Echinops_telfairi
ENSCAFG00020016111	BLM	71	58.389	ENSEBUG00000015743	-	94	51.017	Eptatretus_burgeri
ENSCAFG00020016111	BLM	100	86.826	ENSEASG00005006727	BLM	100	86.826	Equus_asinus_asinus
ENSCAFG00020016111	BLM	94	94.005	ENSECAG00000011405	BLM	100	85.524	Equus_caballus
ENSCAFG00020016111	BLM	94	90.014	ENSEEUG00000001434	BLM	97	75.652	Erinaceus_europaeus
ENSCAFG00020016111	BLM	88	68.033	ENSELUG00000019098	blm	62	74.795	Esox_lucius
ENSCAFG00020016111	BLM	95	95.622	ENSFCAG00000006087	BLM	100	86.826	Felis_catus
ENSCAFG00020016111	BLM	87	73.056	ENSFALG00000010981	BLM	89	55.642	Ficedula_albicollis
ENSCAFG00020016111	BLM	100	73.054	ENSFDAG00000012658	BLM	100	70.147	Fukomys_damarensis
ENSCAFG00020016111	BLM	87	66.712	ENSFHEG00000002553	blm	99	45.168	Fundulus_heteroclitus
ENSCAFG00020016111	BLM	51	54.588	ENSGMOG00000010827	-	97	54.588	Gadus_morhua
ENSCAFG00020016111	BLM	51	50.585	ENSGMOG00000010772	-	96	50.585	Gadus_morhua
ENSCAFG00020016111	BLM	51	45.305	ENSGMOG00000013063	-	99	45.305	Gadus_morhua
ENSCAFG00020016111	BLM	51	49.065	ENSGMOG00000010761	-	99	49.065	Gadus_morhua
ENSCAFG00020016111	BLM	51	48.718	ENSGMOG00000012988	-	99	48.718	Gadus_morhua
ENSCAFG00020016111	BLM	82	71.340	ENSGMOG00000016431	blm	90	60.459	Gadus_morhua
ENSCAFG00020016111	BLM	92	75.000	ENSGALG00000008256	BLM	57	71.701	Gallus_gallus
ENSCAFG00020016111	BLM	92	64.621	ENSGAFG00000001117	blm	62	63.139	Gambusia_affinis
ENSCAFG00020016111	BLM	87	66.988	ENSGACG00000010863	blm	100	72.779	Gasterosteus_aculeatus
ENSCAFG00020016111	BLM	81	76.461	ENSGAGG00000005383	BLM	87	71.512	Gopherus_agassizii
ENSCAFG00020016111	BLM	94	92.202	ENSGGOG00000007710	BLM	92	95.418	Gorilla_gorilla
ENSCAFG00020016111	BLM	83	74.227	ENSHBUG00000015943	blm	85	64.766	Haplochromis_burtoni
ENSCAFG00020016111	BLM	95	89.712	ENSHGLG00000013231	BLM	99	78.295	Heterocephalus_glaber_female
ENSCAFG00020016111	BLM	90	65.067	ENSHCOG00000011455	blm	83	60.941	Hippocampus_comes
ENSCAFG00020016111	BLM	90	65.200	ENSIPUG00000000529	blm	68	63.822	Ictalurus_punctatus
ENSCAFG00020016111	BLM	94	90.685	ENSSTOG00000005000	BLM	100	79.887	Ictidomys_tridecemlineatus
ENSCAFG00020016111	BLM	79	96.286	ENSJJAG00000016322	Blm	94	86.234	Jaculus_jaculus
ENSCAFG00020016111	BLM	89	67.253	ENSKMAG00000016608	blm	56	64.968	Kryptolebias_marmoratus
ENSCAFG00020016111	BLM	79	69.618	ENSLBEG00000018729	blm	61	93.103	Labrus_bergylta
ENSCAFG00020016111	BLM	92	73.721	ENSLACG00000006490	BLM	99	50.639	Latimeria_chalumnae
ENSCAFG00020016111	BLM	90	66.268	ENSLOCG00000014302	blm	88	61.366	Lepisosteus_oculatus
ENSCAFG00020016111	BLM	94	91.518	ENSMFAG00000042982	BLM	92	95.148	Macaca_fascicularis
ENSCAFG00020016111	BLM	94	91.655	ENSMMUG00000019526	BLM	92	95.148	Macaca_mulatta
ENSCAFG00020016111	BLM	94	91.382	ENSMNEG00000031251	BLM	92	94.879	Macaca_nemestrina
ENSCAFG00020016111	BLM	94	87.278	ENSMLEG00000032934	BLM	100	79.817	Mandrillus_leucophaeus
ENSCAFG00020016111	BLM	88	68.076	ENSMAMG00000008726	blm	80	52.962	Mastacembelus_armatus
ENSCAFG00020016111	BLM	83	74.227	ENSMZEG00005022323	blm	75	74.227	Maylandia_zebra
ENSCAFG00020016111	BLM	64	71.776	ENSMGAG00000010473	BLM	99	68.412	Meleagris_gallopavo
ENSCAFG00020016111	BLM	95	89.609	ENSMAUG00000008953	Blm	99	76.458	Mesocricetus_auratus
ENSCAFG00020016111	BLM	93	90.672	ENSMICG00000034442	BLM	100	81.338	Microcebus_murinus
ENSCAFG00020016111	BLM	96	88.165	ENSMOCG00000016367	Blm	99	75.176	Microtus_ochrogaster
ENSCAFG00020016111	BLM	90	66.268	ENSMMOG00000006959	blm	67	65.019	Mola_mola
ENSCAFG00020016111	BLM	95	85.890	ENSMODG00000019449	BLM	99	65.277	Monodelphis_domestica
ENSCAFG00020016111	BLM	89	67.604	ENSMALG00000007323	blm	88	62.706	Monopterus_albus
ENSCAFG00020016111	BLM	92	88.115	MGP_CAROLIEiJ_G0029907	Blm	100	74.105	Mus_caroli
ENSCAFG00020016111	BLM	92	88.798	ENSMUSG00000030528	Blm	100	74.388	Mus_musculus
ENSCAFG00020016111	BLM	93	89.481	MGP_PahariEiJ_G0013129	Blm	100	75.070	Mus_pahari
ENSCAFG00020016111	BLM	92	88.556	MGP_SPRETEiJ_G0031009	Blm	100	74.456	Mus_spretus
ENSCAFG00020016111	BLM	87	86.884	ENSMPUG00000015657	BLM	99	88.279	Mustela_putorius_furo
ENSCAFG00020016111	BLM	95	89.578	ENSMLUG00000014697	BLM	100	80.604	Myotis_lucifugus
ENSCAFG00020016111	BLM	96	89.726	ENSNGAG00000001275	Blm	100	77.472	Nannospalax_galili
ENSCAFG00020016111	BLM	83	74.227	ENSNBRG00000019702	blm	61	64.512	Neolamprologus_brichardi
ENSCAFG00020016111	BLM	94	89.330	ENSNLEG00000012087	BLM	100	82.871	Nomascus_leucogenys
ENSCAFG00020016111	BLM	93	79.741	ENSMEUG00000007253	BLM	99	61.662	Notamacropus_eugenii
ENSCAFG00020016111	BLM	95	94.213	ENSOPRG00000011667	BLM	95	86.326	Ochotona_princeps
ENSCAFG00020016111	BLM	88	83.402	ENSODEG00000015373	BLM	100	77.255	Octodon_degus
ENSCAFG00020016111	BLM	88	67.442	ENSONIG00000015193	blm	59	61.275	Oreochromis_niloticus
ENSCAFG00020016111	BLM	85	85.290	ENSOANG00000009316	-	99	82.835	Ornithorhynchus_anatinus
ENSCAFG00020016111	BLM	89	90.204	ENSOCUG00000013969	BLM	99	74.137	Oryctolagus_cuniculus
ENSCAFG00020016111	BLM	87	68.006	ENSORLG00000008110	blm	85	65.311	Oryzias_latipes
ENSCAFG00020016111	BLM	87	68.006	ENSORLG00020004812	blm	67	64.654	Oryzias_latipes_hni
ENSCAFG00020016111	BLM	87	68.524	ENSORLG00015018640	blm	78	65.565	Oryzias_latipes_hsok
ENSCAFG00020016111	BLM	88	66.712	ENSOMEG00000023545	blm	57	64.803	Oryzias_melastigma
ENSCAFG00020016111	BLM	94	85.557	ENSOGAG00000005708	BLM	100	75.634	Otolemur_garnettii
ENSCAFG00020016111	BLM	93	93.690	ENSOARG00000012875	BLM	100	82.530	Ovis_aries
ENSCAFG00020016111	BLM	94	92.066	ENSPPAG00000032173	BLM	100	82.440	Pan_paniscus
ENSCAFG00020016111	BLM	94	95.486	ENSPPRG00000002471	BLM	100	86.228	Panthera_pardus
ENSCAFG00020016111	BLM	96	94.528	ENSPTIG00000016168	BLM	100	85.614	Panthera_tigris_altaica
ENSCAFG00020016111	BLM	94	91.929	ENSPTRG00000007460	BLM	100	82.158	Pan_troglodytes
ENSCAFG00020016111	BLM	94	91.655	ENSPANG00000018572	BLM	92	94.879	Papio_anubis
ENSCAFG00020016111	BLM	91	65.714	ENSPKIG00000008954	blm	76	62.632	Paramormyrops_kingsleyae
ENSCAFG00020016111	BLM	68	77.362	ENSPSIG00000009792	BLM	99	77.362	Pelodiscus_sinensis
ENSCAFG00020016111	BLM	88	65.574	ENSPMGG00000006629	blm	81	65.527	Periophthalmus_magnuspinnatus
ENSCAFG00020016111	BLM	96	89.110	ENSPEMG00000017348	Blm	100	76.020	Peromyscus_maniculatus_bairdii
ENSCAFG00020016111	BLM	81	60.651	ENSPMAG00000000445	blm	95	58.964	Petromyzon_marinus
ENSCAFG00020016111	BLM	95	84.890	ENSPCIG00000006609	BLM	99	64.461	Phascolarctos_cinereus
ENSCAFG00020016111	BLM	95	67.164	ENSPFOG00000005059	blm	60	64.834	Poecilia_formosa
ENSCAFG00020016111	BLM	92	65.195	ENSPLAG00000017344	blm	69	63.094	Poecilia_latipinna
ENSCAFG00020016111	BLM	92	65.325	ENSPMEG00000000321	blm	63	63.216	Poecilia_mexicana
ENSCAFG00020016111	BLM	92	64.314	ENSPREG00000007715	blm	59	62.728	Poecilia_reticulata
ENSCAFG00020016111	BLM	93	91.245	ENSPPYG00000006784	BLM	100	80.818	Pongo_abelii
ENSCAFG00020016111	BLM	94	86.785	ENSPCAG00000008960	BLM	73	87.879	Procavia_capensis
ENSCAFG00020016111	BLM	100	77.844	ENSPCOG00000000439	BLM	100	77.844	Propithecus_coquereli
ENSCAFG00020016111	BLM	86	96.795	ENSPVAG00000011642	BLM	83	96.486	Pteropus_vampyrus
ENSCAFG00020016111	BLM	89	54.509	ENSPNYG00000010956	blm	84	53.418	Pundamilia_nyererei
ENSCAFG00020016111	BLM	88	68.904	ENSPNAG00000011714	blm	67	63.550	Pygocentrus_nattereri
ENSCAFG00020016111	BLM	96	86.472	ENSRNOG00000011213	Blm	100	73.573	Rattus_norvegicus
ENSCAFG00020016111	BLM	94	91.108	ENSRBIG00000029656	BLM	92	93.531	Rhinopithecus_bieti
ENSCAFG00020016111	BLM	94	91.108	ENSRROG00000037871	BLM	92	93.531	Rhinopithecus_roxellana
ENSCAFG00020016111	BLM	100	81.245	ENSSBOG00000030957	BLM	100	82.191	Saimiri_boliviensis_boliviensis
ENSCAFG00020016111	BLM	94	85.359	ENSSHAG00000007988	BLM	99	63.902	Sarcophilus_harrisii
ENSCAFG00020016111	BLM	86	68.303	ENSSFOG00015015462	blm	63	64.594	Scleropages_formosus
ENSCAFG00020016111	BLM	87	67.586	ENSSMAG00000001120	blm	86	56.250	Scophthalmus_maximus
ENSCAFG00020016111	BLM	89	67.028	ENSSDUG00000010955	blm	56	65.184	Seriola_dumerili
ENSCAFG00020016111	BLM	87	67.769	ENSSLDG00000000634	blm	59	62.012	Seriola_lalandi_dorsalis
ENSCAFG00020016111	BLM	93	83.425	ENSSARG00000006398	BLM	96	76.299	Sorex_araneus
ENSCAFG00020016111	BLM	93	70.139	ENSSPUG00000000013	BLM	99	55.060	Sphenodon_punctatus
ENSCAFG00020016111	BLM	86	67.692	ENSSPAG00000013999	blm	65	64.758	Stegastes_partitus
ENSCAFG00020016111	BLM	94	91.792	ENSSSCG00000001816	BLM	99	83.200	Sus_scrofa
ENSCAFG00020016111	BLM	87	65.981	ENSTGUG00000009959	-	99	52.373	Taeniopygia_guttata
ENSCAFG00020016111	BLM	87	65.663	ENSTRUG00000019860	blm	57	72.131	Takifugu_rubripes
ENSCAFG00020016111	BLM	83	72.541	ENSTNIG00000019246	blm	62	72.541	Tetraodon_nigroviridis
ENSCAFG00020016111	BLM	77	93.506	ENSTBEG00000006706	BLM	81	84.717	Tupaia_belangeri
ENSCAFG00020016111	BLM	94	93.707	ENSTTRG00000016386	BLM	100	84.556	Tursiops_truncatus
ENSCAFG00020016111	BLM	94	96.306	ENSUMAG00000009105	BLM	100	96.311	Ursus_maritimus
ENSCAFG00020016111	BLM	94	87.825	ENSVPAG00000000085	BLM	99	81.677	Vicugna_pacos
ENSCAFG00020016111	BLM	100	98.944	ENSVVUG00000006402	BLM	100	99.451	Vulpes_vulpes
ENSCAFG00020016111	BLM	90	74.159	ENSXETG00000007847	blm	52	74.159	Xenopus_tropicalis
ENSCAFG00020016111	BLM	92	61.538	ENSXCOG00000020227	blm	84	61.047	Xiphophorus_couchianus
ENSCAFG00020016111	BLM	92	64.491	ENSXMAG00000002951	blm	99	45.130	Xiphophorus_maculatus