EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020016234 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 5076 bases
Position: chrQKWQ01001620.1:11251945-11257020
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020020492	LSM	PF01423.22	6.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020023711	-	309	-	ENSCAFP00020020492	102 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020016234's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020016234's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020016234	-	95	34.021	ENSCAFG00020007643	-	77	35.294
ENSCAFG00020016234	-	97	33.333	ENSCAFG00020012800	-	55	38.272

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020016234	-	75	90.909	ENSG00000125835	SNRPB	51	94.444	Homo_sapiens
ENSCAFG00020016234	-	50	72.549	ENSAPEG00000008846	-	77	72.549	Amphiprion_percula
ENSCAFG00020016234	-	79	83.951	ENSCCAG00000035140	-	63	83.333	Cebus_capucinus
ENSCAFG00020016234	-	60	57.377	ENSFHEG00000006534	-	67	57.377	Fundulus_heteroclitus
ENSCAFG00020016234	-	75	90.909	MGP_CAROLIEiJ_G0024293	Snrpb	51	94.444	Mus_caroli
ENSCAFG00020016234	-	75	90.909	ENSMUSG00000027404	Snrpb	51	94.444	Mus_musculus
ENSCAFG00020016234	-	75	90.909	MGP_PahariEiJ_G0025738	Snrpb	51	94.444	Mus_pahari
ENSCAFG00020016234	-	75	90.909	MGP_SPRETEiJ_G0025213	Snrpb	51	94.444	Mus_spretus
ENSCAFG00020016234	-	72	86.301	ENSPMAG00000004923	SNRPB	82	86.301	Petromyzon_marinus
ENSCAFG00020016234	-	75	90.909	ENSRNOG00000006961	Snrpb	51	94.444	Rattus_norvegicus
ENSCAFG00020016234	-	75	81.818	ENSXCOG00000017217	snrpb	91	81.818	Xiphophorus_couchianus