EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020016880 (Gene tree)
Gene ID: 112666163
Gene Symbol: R3HDM4
Alias: C19orf22|MGC16353
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 8324 bases
Position: chrQKWQ01000751.1:385468-393791
Accession: 112666163
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020021360	R3H	PF01424.22	2.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020024728	R3HDM4-201	1744	XM_025456654	ENSCAFP00020021360	272 (aa)	XP_025312439	UPI000DC667C8

Gene Model

Click here to download ENSCAFG00020016880's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020016880's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020016880	R3HDM4	100	90.441	ENSG00000198858	R3HDM4	100	90.441	Homo_sapiens
ENSCAFG00020016880	R3HDM4	90	96.311	ENSAMEG00000003001	R3HDM4	100	96.311	Ailuropoda_melanoleuca
ENSCAFG00020016880	R3HDM4	87	58.403	ENSACIG00000004672	r3hdm4	91	58.403	Amphilophus_citrinellus
ENSCAFG00020016880	R3HDM4	86	54.894	ENSATEG00000015913	r3hdm4	91	56.170	Anabas_testudineus
ENSCAFG00020016880	R3HDM4	89	93.827	ENSANAG00000029748	R3HDM4	100	93.827	Aotus_nancymaae
ENSCAFG00020016880	R3HDM4	100	91.912	ENSBTAG00000046406	R3HDM4	100	91.912	Bos_taurus
ENSCAFG00020016880	R3HDM4	92	91.633	ENSCJAG00000020114	R3HDM4	93	91.633	Callithrix_jacchus
ENSCAFG00020016880	R3HDM4	100	99.632	ENSCAFG00000019665	R3HDM4	100	99.632	Canis_familiaris
ENSCAFG00020016880	R3HDM4	100	91.912	ENSCHIG00000020110	R3HDM4	100	91.912	Capra_hircus
ENSCAFG00020016880	R3HDM4	89	92.181	ENSCCAG00000019955	R3HDM4	88	92.181	Cebus_capucinus
ENSCAFG00020016880	R3HDM4	100	87.956	ENSCATG00000037269	R3HDM4	100	88.686	Cercocebus_atys
ENSCAFG00020016880	R3HDM4	90	90.574	ENSCLAG00000007094	R3HDM4	100	90.574	Chinchilla_lanigera
ENSCAFG00020016880	R3HDM4	100	88.971	ENSCSAG00000012574	R3HDM4	100	88.971	Chlorocebus_sabaeus
ENSCAFG00020016880	R3HDM4	90	70.612	ENSCPBG00000009805	R3HDM4	93	70.612	Chrysemys_picta_bellii
ENSCAFG00020016880	R3HDM4	93	92.063	ENSCANG00000040439	R3HDM4	88	92.063	Colobus_angolensis_palliatus
ENSCAFG00020016880	R3HDM4	99	81.985	ENSCGRG00001021650	R3hdm4	100	82.353	Cricetulus_griseus_chok1gshd
ENSCAFG00020016880	R3HDM4	99	81.985	ENSCGRG00000013169	R3hdm4	100	82.353	Cricetulus_griseus_crigri
ENSCAFG00020016880	R3HDM4	87	55.882	ENSCSEG00000018211	r3hdm4	91	55.882	Cynoglossus_semilaevis
ENSCAFG00020016880	R3HDM4	87	57.322	ENSCVAG00000017127	r3hdm4	92	57.322	Cyprinodon_variegatus
ENSCAFG00020016880	R3HDM4	93	87.451	ENSDORG00000006605	R3hdm4	100	88.980	Dipodomys_ordii
ENSCAFG00020016880	R3HDM4	93	92.460	ENSEASG00005021556	R3HDM4	89	94.672	Equus_asinus_asinus
ENSCAFG00020016880	R3HDM4	100	92.647	ENSECAG00000000003	R3HDM4	100	92.647	Equus_caballus
ENSCAFG00020016880	R3HDM4	100	95.221	ENSFCAG00000042437	R3HDM4	100	95.221	Felis_catus
ENSCAFG00020016880	R3HDM4	89	68.724	ENSFALG00000013938	R3HDM4	100	68.724	Ficedula_albicollis
ENSCAFG00020016880	R3HDM4	90	88.571	ENSFDAG00000017040	R3HDM4	100	88.571	Fukomys_damarensis
ENSCAFG00020016880	R3HDM4	87	57.741	ENSFHEG00000017636	r3hdm4	92	57.741	Fundulus_heteroclitus
ENSCAFG00020016880	R3HDM4	87	52.101	ENSGMOG00000001231	r3hdm4	97	52.720	Gadus_morhua
ENSCAFG00020016880	R3HDM4	93	64.615	ENSGALG00000001998	R3HDM4	98	64.615	Gallus_gallus
ENSCAFG00020016880	R3HDM4	87	58.403	ENSGAFG00000004173	r3hdm4	92	58.403	Gambusia_affinis
ENSCAFG00020016880	R3HDM4	94	66.923	ENSGAGG00000019698	R3HDM4	98	66.923	Gopherus_agassizii
ENSCAFG00020016880	R3HDM4	94	91.016	ENSGGOG00000008040	R3HDM4	100	93.443	Gorilla_gorilla
ENSCAFG00020016880	R3HDM4	87	57.322	ENSHBUG00000014810	r3hdm4	91	58.577	Haplochromis_burtoni
ENSCAFG00020016880	R3HDM4	100	84.559	ENSHGLG00000016194	R3HDM4	100	85.662	Heterocephalus_glaber_female
ENSCAFG00020016880	R3HDM4	87	55.508	ENSHCOG00000008422	r3hdm4	91	55.508	Hippocampus_comes
ENSCAFG00020016880	R3HDM4	87	55.462	ENSIPUG00000006716	r3hdm4	91	55.462	Ictalurus_punctatus
ENSCAFG00020016880	R3HDM4	90	89.754	ENSSTOG00000023015	R3HDM4	100	89.754	Ictidomys_tridecemlineatus
ENSCAFG00020016880	R3HDM4	99	86.765	ENSJJAG00000012475	R3hdm4	100	86.765	Jaculus_jaculus
ENSCAFG00020016880	R3HDM4	87	57.322	ENSKMAG00000005853	r3hdm4	91	57.322	Kryptolebias_marmoratus
ENSCAFG00020016880	R3HDM4	87	56.723	ENSLBEG00000000730	r3hdm4	91	56.723	Labrus_bergylta
ENSCAFG00020016880	R3HDM4	90	62.041	ENSLACG00000016445	R3HDM4	94	62.041	Latimeria_chalumnae
ENSCAFG00020016880	R3HDM4	92	56.574	ENSLOCG00000002423	r3hdm4	96	56.574	Lepisosteus_oculatus
ENSCAFG00020016880	R3HDM4	93	90.234	ENSLAFG00000017796	R3HDM4	99	90.234	Loxodonta_africana
ENSCAFG00020016880	R3HDM4	100	89.338	ENSMFAG00000044131	R3HDM4	100	89.338	Macaca_fascicularis
ENSCAFG00020016880	R3HDM4	100	82.353	ENSMMUG00000009682	R3HDM4	100	82.353	Macaca_mulatta
ENSCAFG00020016880	R3HDM4	90	93.852	ENSMNEG00000044115	R3HDM4	99	93.852	Macaca_nemestrina
ENSCAFG00020016880	R3HDM4	90	91.870	ENSMLEG00000035693	R3HDM4	91	92.276	Mandrillus_leucophaeus
ENSCAFG00020016880	R3HDM4	75	60.194	ENSMAMG00000005652	r3hdm4	82	60.194	Mastacembelus_armatus
ENSCAFG00020016880	R3HDM4	99	81.250	ENSMAUG00000010611	R3hdm4	98	83.922	Mesocricetus_auratus
ENSCAFG00020016880	R3HDM4	100	89.706	ENSMICG00000010124	R3HDM4	100	89.706	Microcebus_murinus
ENSCAFG00020016880	R3HDM4	99	81.919	ENSMOCG00000002646	R3hdm4	100	82.288	Microtus_ochrogaster
ENSCAFG00020016880	R3HDM4	87	57.563	ENSMMOG00000008253	r3hdm4	92	57.563	Mola_mola
ENSCAFG00020016880	R3HDM4	85	67.672	ENSMODG00000005698	R3HDM4	100	67.672	Monodelphis_domestica
ENSCAFG00020016880	R3HDM4	87	56.723	ENSMALG00000018856	r3hdm4	91	56.723	Monopterus_albus
ENSCAFG00020016880	R3HDM4	99	80.074	MGP_CAROLIEiJ_G0015551	R3hdm4	100	81.181	Mus_caroli
ENSCAFG00020016880	R3HDM4	99	80.074	ENSMUSG00000035781	R3hdm4	100	81.181	Mus_musculus
ENSCAFG00020016880	R3HDM4	99	80.812	MGP_PahariEiJ_G0030964	R3hdm4	100	81.919	Mus_pahari
ENSCAFG00020016880	R3HDM4	99	80.074	MGP_SPRETEiJ_G0016369	-	84	81.181	Mus_spretus
ENSCAFG00020016880	R3HDM4	94	91.829	ENSMPUG00000009394	R3HDM4	95	91.829	Mustela_putorius_furo
ENSCAFG00020016880	R3HDM4	87	56.904	ENSNBRG00000004438	r3hdm4	91	58.159	Neolamprologus_brichardi
ENSCAFG00020016880	R3HDM4	83	91.342	ENSNLEG00000001022	R3HDM4	100	91.342	Nomascus_leucogenys
ENSCAFG00020016880	R3HDM4	90	66.802	ENSMEUG00000011020	R3HDM4	100	66.802	Notamacropus_eugenii
ENSCAFG00020016880	R3HDM4	100	87.132	ENSODEG00000011745	R3HDM4	100	87.132	Octodon_degus
ENSCAFG00020016880	R3HDM4	87	56.904	ENSONIG00000012675	r3hdm4	84	58.159	Oreochromis_niloticus
ENSCAFG00020016880	R3HDM4	87	58.577	ENSOMEG00000003005	r3hdm4	91	58.577	Oryzias_melastigma
ENSCAFG00020016880	R3HDM4	89	92.562	ENSOGAG00000025656	R3HDM4	92	92.562	Otolemur_garnettii
ENSCAFG00020016880	R3HDM4	90	94.672	ENSOARG00000009945	R3HDM4	100	94.672	Ovis_aries
ENSCAFG00020016880	R3HDM4	94	91.406	ENSPPAG00000042371	R3HDM4	100	93.852	Pan_paniscus
ENSCAFG00020016880	R3HDM4	100	89.338	ENSPANG00000015203	R3HDM4	100	89.338	Papio_anubis
ENSCAFG00020016880	R3HDM4	85	56.710	ENSPKIG00000007421	r3hdm4	88	56.170	Paramormyrops_kingsleyae
ENSCAFG00020016880	R3HDM4	92	53.755	ENSPMGG00000020467	r3hdm4	94	53.755	Periophthalmus_magnuspinnatus
ENSCAFG00020016880	R3HDM4	89	87.654	ENSPEMG00000008365	Tmem259	100	87.654	Peromyscus_maniculatus_bairdii
ENSCAFG00020016880	R3HDM4	87	57.563	ENSPFOG00000003199	r3hdm4	92	57.563	Poecilia_formosa
ENSCAFG00020016880	R3HDM4	87	57.143	ENSPMEG00000014183	r3hdm4	92	57.143	Poecilia_mexicana
ENSCAFG00020016880	R3HDM4	87	57.983	ENSPREG00000010709	r3hdm4	92	57.983	Poecilia_reticulata
ENSCAFG00020016880	R3HDM4	100	87.500	ENSPPYG00000009297	R3HDM4	100	87.500	Pongo_abelii
ENSCAFG00020016880	R3HDM4	56	90.789	ENSPCAG00000010997	R3HDM4	56	90.789	Procavia_capensis
ENSCAFG00020016880	R3HDM4	100	88.971	ENSPCOG00000016785	R3HDM4	100	88.971	Propithecus_coquereli
ENSCAFG00020016880	R3HDM4	87	57.322	ENSPNYG00000017489	r3hdm4	91	58.577	Pundamilia_nyererei
ENSCAFG00020016880	R3HDM4	99	80.812	ENSRNOG00000011489	R3hdm4	100	81.181	Rattus_norvegicus
ENSCAFG00020016880	R3HDM4	90	94.672	ENSRROG00000028842	R3HDM4	91	94.672	Rhinopithecus_roxellana
ENSCAFG00020016880	R3HDM4	89	91.093	ENSSBOG00000019298	R3HDM4	72	91.903	Saimiri_boliviensis_boliviensis
ENSCAFG00020016880	R3HDM4	54	70.548	ENSSHAG00000003036	-	100	70.548	Sarcophilus_harrisii
ENSCAFG00020016880	R3HDM4	87	55.882	ENSSFOG00015020574	r3hdm4	87	55.882	Scleropages_formosus
ENSCAFG00020016880	R3HDM4	87	57.741	ENSSMAG00000021090	r3hdm4	68	57.741	Scophthalmus_maximus
ENSCAFG00020016880	R3HDM4	87	58.996	ENSSDUG00000008488	r3hdm4	91	58.996	Seriola_dumerili
ENSCAFG00020016880	R3HDM4	87	58.996	ENSSLDG00000025328	r3hdm4	91	58.996	Seriola_lalandi_dorsalis
ENSCAFG00020016880	R3HDM4	94	68.235	ENSSPUG00000005434	R3HDM4	99	68.235	Sphenodon_punctatus
ENSCAFG00020016880	R3HDM4	86	54.430	ENSSPAG00000002562	r3hdm4	90	54.430	Stegastes_partitus
ENSCAFG00020016880	R3HDM4	100	93.750	ENSSSCG00000013419	R3HDM4	100	93.750	Sus_scrofa
ENSCAFG00020016880	R3HDM4	76	64.115	ENSTGUG00000000663	R3HDM4	100	64.115	Taeniopygia_guttata
ENSCAFG00020016880	R3HDM4	90	90.164	ENSTTRG00000001470	R3HDM4	100	91.803	Tursiops_truncatus
ENSCAFG00020016880	R3HDM4	100	82.721	ENSUAMG00000005751	R3HDM4	100	96.413	Ursus_americanus
ENSCAFG00020016880	R3HDM4	100	98.529	ENSVVUG00000022685	R3HDM4	100	98.529	Vulpes_vulpes
ENSCAFG00020016880	R3HDM4	88	47.899	ENSXETG00000033624	R3HDM4	92	47.899	Xenopus_tropicalis
ENSCAFG00020016880	R3HDM4	87	57.322	ENSXCOG00000005127	r3hdm4	92	57.322	Xiphophorus_couchianus
ENSCAFG00020016880	R3HDM4	87	57.563	ENSXMAG00000022875	r3hdm4	92	57.563	Xiphophorus_maculatus