EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020017255 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 8881 bases
Position: chrQKWQ01001090.1:62527534-62536414
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020021812	RRM_1	PF00076.22	1.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020025269	-	342	-	ENSCAFP00020021812	113 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020017255's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020017255's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020017255	-	75	71.765	ENSCAFG00020019449	-	81	72.840

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020017255	-	97	88.793	ENSG00000116754	SRSF11	66	97.647	Homo_sapiens
ENSCAFG00020017255	-	75	71.765	ENSG00000153914	SREK1	81	72.840	Homo_sapiens
ENSCAFG00020017255	-	78	76.136	ENSAPOG00000004488	-	76	80.488	Acanthochromis_polyacanthus
ENSCAFG00020017255	-	75	78.824	ENSAPOG00000007244	-	59	81.707	Acanthochromis_polyacanthus
ENSCAFG00020017255	-	79	75.281	ENSACIG00000012348	-	91	77.907	Amphilophus_citrinellus
ENSCAFG00020017255	-	78	76.136	ENSACIG00000018075	-	76	80.488	Amphilophus_citrinellus
ENSCAFG00020017255	-	73	71.951	ENSACIG00000015055	-	65	71.605	Amphilophus_citrinellus
ENSCAFG00020017255	-	73	70.732	ENSAOCG00000024368	-	82	70.370	Amphiprion_ocellaris
ENSCAFG00020017255	-	70	81.013	ENSAOCG00000000739	-	86	80.247	Amphiprion_ocellaris
ENSCAFG00020017255	-	78	76.136	ENSAPEG00000003619	SRSF11	76	80.488	Amphiprion_percula
ENSCAFG00020017255	-	79	75.281	ENSAPEG00000003142	SRSF11	84	81.481	Amphiprion_percula
ENSCAFG00020017255	-	73	70.732	ENSAPEG00000002218	-	88	70.370	Amphiprion_percula
ENSCAFG00020017255	-	74	67.857	ENSATEG00000009464	-	89	70.370	Anabas_testudineus
ENSCAFG00020017255	-	73	82.927	ENSATEG00000011691	srsf11	76	82.927	Anabas_testudineus
ENSCAFG00020017255	-	78	76.136	ENSATEG00000007534	-	76	80.488	Anabas_testudineus
ENSCAFG00020017255	-	88	65.000	ENSANAG00000031358	SREK1	81	72.840	Aotus_nancymaae
ENSCAFG00020017255	-	75	78.824	ENSACLG00000000623	srsf11	84	81.707	Astatotilapia_calliptera
ENSCAFG00020017255	-	78	69.318	ENSBTAG00000007321	SREK1	81	72.840	Bos_taurus
ENSCAFG00020017255	-	88	64.000	ENSCJAG00000015950	SREK1	81	72.840	Callithrix_jacchus
ENSCAFG00020017255	-	72	72.840	ENSCHIG00000025052	-	81	72.840	Capra_hircus
ENSCAFG00020017255	-	100	90.678	ENSCHIG00000025295	SRSF11	75	100.000	Capra_hircus
ENSCAFG00020017255	-	75	71.765	ENSTSYG00000036957	SREK1	81	72.840	Carlito_syrichta
ENSCAFG00020017255	-	75	91.765	ENSTSYG00000033270	-	60	91.765	Carlito_syrichta
ENSCAFG00020017255	-	88	65.000	ENSCCAG00000020591	SREK1	81	72.840	Cebus_capucinus
ENSCAFG00020017255	-	78	68.182	ENSCATG00000031482	SREK1	81	72.840	Cercocebus_atys
ENSCAFG00020017255	-	87	81.633	ENSCPBG00000022430	-	72	90.123	Chrysemys_picta_bellii
ENSCAFG00020017255	-	80	66.667	ENSCPBG00000026866	SREK1	65	69.412	Chrysemys_picta_bellii
ENSCAFG00020017255	-	78	68.182	ENSCANG00000030421	SREK1	81	72.840	Colobus_angolensis_palliatus
ENSCAFG00020017255	-	73	70.732	ENSCSEG00000013934	-	86	69.737	Cynoglossus_semilaevis
ENSCAFG00020017255	-	76	69.767	ENSCVAG00000002404	-	69	69.412	Cyprinodon_variegatus
ENSCAFG00020017255	-	81	81.522	ENSDARG00000098574	srsf11	93	81.176	Danio_rerio
ENSCAFG00020017255	-	75	70.588	ENSDORG00000023160	-	64	70.588	Dipodomys_ordii
ENSCAFG00020017255	-	100	94.737	ENSEASG00005007847	SRSF11	77	100.000	Equus_asinus_asinus
ENSCAFG00020017255	-	75	71.765	ENSEASG00005006832	-	71	72.840	Equus_asinus_asinus
ENSCAFG00020017255	-	75	71.765	ENSECAG00000035731	-	70	72.840	Equus_caballus
ENSCAFG00020017255	-	72	71.605	ENSFCAG00000036884	-	81	71.605	Felis_catus
ENSCAFG00020017255	-	99	89.744	ENSFCAG00000034448	-	67	97.647	Felis_catus
ENSCAFG00020017255	-	81	67.033	ENSFHEG00000020959	-	66	68.235	Fundulus_heteroclitus
ENSCAFG00020017255	-	80	66.667	ENSGALG00000043541	SREK1	82	70.370	Gallus_gallus
ENSCAFG00020017255	-	74	70.238	ENSGAFG00000001732	-	68	69.880	Gambusia_affinis
ENSCAFG00020017255	-	80	66.667	ENSGAGG00000006087	SREK1	65	69.412	Gopherus_agassizii
ENSCAFG00020017255	-	80	91.111	ENSGAGG00000022411	-	83	95.294	Gopherus_agassizii
ENSCAFG00020017255	-	75	71.765	ENSGGOG00000004737	SREK1	81	72.840	Gorilla_gorilla
ENSCAFG00020017255	-	83	63.725	ENSHBUG00000007082	-	63	69.412	Haplochromis_burtoni
ENSCAFG00020017255	-	72	67.901	ENSHCOG00000017228	-	78	66.667	Hippocampus_comes
ENSCAFG00020017255	-	74	80.952	ENSHCOG00000016860	-	84	82.927	Hippocampus_comes
ENSCAFG00020017255	-	75	70.588	ENSSTOG00000008850	SREK1	81	72.840	Ictidomys_tridecemlineatus
ENSCAFG00020017255	-	75	69.412	ENSJJAG00000008846	-	66	69.412	Jaculus_jaculus
ENSCAFG00020017255	-	79	76.404	ENSLBEG00000024167	srsf11	84	82.927	Labrus_bergylta
ENSCAFG00020017255	-	73	73.171	ENSLBEG00000022954	-	59	72.840	Labrus_bergylta
ENSCAFG00020017255	-	75	71.765	ENSMFAG00000039823	SREK1	81	72.840	Macaca_fascicularis
ENSCAFG00020017255	-	78	68.182	ENSMMUG00000014586	SREK1	74	72.840	Macaca_mulatta
ENSCAFG00020017255	-	78	68.182	ENSMNEG00000030723	SREK1	81	72.840	Macaca_nemestrina
ENSCAFG00020017255	-	78	68.182	ENSMLEG00000039078	SREK1	81	72.840	Mandrillus_leucophaeus
ENSCAFG00020017255	-	73	71.951	ENSMAMG00000003099	-	79	71.605	Mastacembelus_armatus
ENSCAFG00020017255	-	78	76.136	ENSMAMG00000015002	-	77	80.488	Mastacembelus_armatus
ENSCAFG00020017255	-	83	64.583	ENSMZEG00005005707	-	63	70.000	Maylandia_zebra
ENSCAFG00020017255	-	75	70.588	ENSMICG00000034959	SREK1	81	72.840	Microcebus_murinus
ENSCAFG00020017255	-	74	77.381	ENSMMOG00000008877	-	80	80.247	Mola_mola
ENSCAFG00020017255	-	78	76.136	ENSMMOG00000016751	-	76	80.488	Mola_mola
ENSCAFG00020017255	-	79	65.169	ENSMALG00000017086	srek1	91	67.901	Monopterus_albus
ENSCAFG00020017255	-	75	77.647	ENSMALG00000016608	srsf11	84	80.488	Monopterus_albus
ENSCAFG00020017255	-	78	100.000	MGP_CAROLIEiJ_G0025767	Srsf11	88	97.727	Mus_caroli
ENSCAFG00020017255	-	78	100.000	ENSMUSG00000055436	Srsf11	87	97.727	Mus_musculus
ENSCAFG00020017255	-	78	100.000	MGP_PahariEiJ_G0027217	Srsf11	88	97.727	Mus_pahari
ENSCAFG00020017255	-	78	100.000	MGP_SPRETEiJ_G0026719	Srsf11	88	97.727	Mus_spretus
ENSCAFG00020017255	-	75	70.588	ENSNGAG00000014631	-	64	70.588	Nannospalax_galili
ENSCAFG00020017255	-	81	65.000	ENSNBRG00000010656	-	63	69.412	Neolamprologus_brichardi
ENSCAFG00020017255	-	79	75.281	ENSNBRG00000020213	-	91	77.907	Neolamprologus_brichardi
ENSCAFG00020017255	-	78	68.182	ENSNLEG00000003827	SREK1	81	72.840	Nomascus_leucogenys
ENSCAFG00020017255	-	75	71.765	ENSODEG00000016218	-	79	72.840	Octodon_degus
ENSCAFG00020017255	-	73	80.488	ENSORLG00000030366	-	73	80.488	Oryzias_latipes
ENSCAFG00020017255	-	67	69.737	ENSORLG00000002711	-	63	69.737	Oryzias_latipes
ENSCAFG00020017255	-	75	68.235	ENSORLG00020012815	-	64	68.235	Oryzias_latipes_hni
ENSCAFG00020017255	-	78	76.136	ENSORLG00020009393	-	73	80.488	Oryzias_latipes_hni
ENSCAFG00020017255	-	81	67.742	ENSORLG00015020455	-	67	68.235	Oryzias_latipes_hsok
ENSCAFG00020017255	-	78	76.136	ENSORLG00015009374	-	73	80.488	Oryzias_latipes_hsok
ENSCAFG00020017255	-	75	71.765	ENSPPAG00000031605	SREK1	74	72.840	Pan_paniscus
ENSCAFG00020017255	-	75	69.412	ENSPPRG00000024617	SREK1	81	71.605	Panthera_pardus
ENSCAFG00020017255	-	75	69.412	ENSPTIG00000006608	SREK1	81	71.605	Panthera_tigris_altaica
ENSCAFG00020017255	-	75	71.765	ENSPTRG00000016936	SREK1	81	72.840	Pan_troglodytes
ENSCAFG00020017255	-	75	71.765	ENSPANG00000008953	SREK1	81	72.840	Papio_anubis
ENSCAFG00020017255	-	74	78.571	ENSPKIG00000021576	-	89	78.824	Paramormyrops_kingsleyae
ENSCAFG00020017255	-	83	71.277	ENSPMGG00000005045	-	77	75.000	Periophthalmus_magnuspinnatus
ENSCAFG00020017255	-	73	74.390	ENSPMGG00000017029	-	70	75.309	Periophthalmus_magnuspinnatus
ENSCAFG00020017255	-	73	78.313	ENSPMGG00000000954	-	76	80.247	Periophthalmus_magnuspinnatus
ENSCAFG00020017255	-	78	76.136	ENSPLAG00000009484	-	57	80.488	Poecilia_latipinna
ENSCAFG00020017255	-	74	70.238	ENSPLAG00000008818	-	61	69.880	Poecilia_latipinna
ENSCAFG00020017255	-	74	70.238	ENSPLAG00000014609	-	61	69.880	Poecilia_latipinna
ENSCAFG00020017255	-	81	79.121	ENSPMEG00000018837	srsf11	72	81.818	Poecilia_mexicana
ENSCAFG00020017255	-	74	70.238	ENSPMEG00000006824	-	61	69.880	Poecilia_mexicana
ENSCAFG00020017255	-	78	76.136	ENSPMEG00000023453	-	57	80.488	Poecilia_mexicana
ENSCAFG00020017255	-	74	70.238	ENSPMEG00000006607	-	61	69.880	Poecilia_mexicana
ENSCAFG00020017255	-	80	68.889	ENSPREG00000019922	-	68	70.588	Poecilia_reticulata
ENSCAFG00020017255	-	75	71.765	ENSPCOG00000026230	SREK1	81	72.840	Propithecus_coquereli
ENSCAFG00020017255	-	83	63.725	ENSPNYG00000007178	-	63	69.412	Pundamilia_nyererei
ENSCAFG00020017255	-	75	71.765	ENSRBIG00000033818	SREK1	81	72.840	Rhinopithecus_bieti
ENSCAFG00020017255	-	99	89.744	ENSRBIG00000042971	SRSF11	66	97.701	Rhinopithecus_bieti
ENSCAFG00020017255	-	78	68.182	ENSRROG00000017210	SREK1	81	72.840	Rhinopithecus_roxellana
ENSCAFG00020017255	-	88	65.000	ENSSBOG00000031230	SREK1	81	72.840	Saimiri_boliviensis_boliviensis
ENSCAFG00020017255	-	99	88.889	ENSSBOG00000033461	SRSF11	66	97.701	Saimiri_boliviensis_boliviensis
ENSCAFG00020017255	-	67	82.895	ENSSFOG00015016086	-	69	82.895	Scleropages_formosus
ENSCAFG00020017255	-	73	71.951	ENSSDUG00000010395	-	80	71.605	Seriola_dumerili
ENSCAFG00020017255	-	73	71.951	ENSSLDG00000016285	-	80	71.605	Seriola_lalandi_dorsalis
ENSCAFG00020017255	-	78	76.136	ENSSLDG00000012105	-	76	80.488	Seriola_lalandi_dorsalis
ENSCAFG00020017255	-	75	78.824	ENSSLDG00000015477	-	84	81.707	Seriola_lalandi_dorsalis
ENSCAFG00020017255	-	78	76.136	ENSSPAG00000016483	-	65	80.247	Stegastes_partitus
ENSCAFG00020017255	-	73	70.732	ENSSPAG00000022310	-	82	70.370	Stegastes_partitus
ENSCAFG00020017255	-	73	71.951	ENSTRUG00000022058	-	66	71.605	Takifugu_rubripes
ENSCAFG00020017255	-	99	89.744	ENSUAMG00000008403	-	66	97.701	Ursus_americanus
ENSCAFG00020017255	-	72	72.840	ENSUAMG00000022662	-	77	70.238	Ursus_americanus
ENSCAFG00020017255	-	75	71.765	ENSVVUG00000005888	-	81	72.840	Vulpes_vulpes
ENSCAFG00020017255	-	74	70.238	ENSXCOG00000017792	-	65	69.880	Xiphophorus_couchianus
ENSCAFG00020017255	-	81	78.261	ENSXCOG00000003220	-	71	82.927	Xiphophorus_couchianus
ENSCAFG00020017255	-	72	80.247	ENSXCOG00000015127	-	89	79.518	Xiphophorus_couchianus
ENSCAFG00020017255	-	78	76.136	ENSXMAG00000019180	SRSF11	54	80.488	Xiphophorus_maculatus
ENSCAFG00020017255	-	74	70.238	ENSXMAG00000028210	-	68	69.880	Xiphophorus_maculatus