EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020017552 (Gene tree)
Gene ID: -
Gene Symbol: TRIM39-RPP21
Alias: -
Full Name: TRIM39-RPP21 readthrough
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 14353 bases
Position: chrQKWQ01001619.1:303743-318095
Accession: 38845
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020022201	Rpr2	PF04032.16	1.7e-18	1	1
ENSCAFP00020022200	Rpr2	PF04032.16	2.3e-13	1	1
ENSCAFP00020022199	Rpr2	PF04032.16	2.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020025708	TRIM39-RPP21-203	1806	-	ENSCAFP00020022201	274 (aa)	-	-
ENSCAFT00020025706	TRIM39-RPP21-201	1519	-	ENSCAFP00020022199	503 (aa)	-	UPI0002256108
ENSCAFT00020025707	TRIM39-RPP21-202	1624	-	ENSCAFP00020022200	538 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020017552's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020017552's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020017552	TRIM39-RPP21	100	95.825	ENSG00000248167	TRIM39-RPP21	100	95.825	Homo_sapiens
ENSCAFG00020017552	TRIM39-RPP21	100	96.421	ENSCANG00000028141	TRIM39-RPP21	100	96.421	Colobus_angolensis_palliatus
ENSCAFG00020017552	TRIM39-RPP21	100	99.458	ENSECAG00000015974	TRIM39-RPP21	87	99.728	Equus_caballus
ENSCAFG00020017552	TRIM39-RPP21	99	95.229	ENSMICG00000004749	TRIM39-RPP21	99	95.030	Microcebus_murinus
ENSCAFG00020017552	TRIM39-RPP21	82	89.855	ENSMLUG00000015705	TRIM39-RPP21	99	89.855	Myotis_lucifugus
ENSCAFG00020017552	TRIM39-RPP21	97	94.251	ENSOCUG00000014141	TRIM39-RPP21	57	94.456	Oryctolagus_cuniculus
ENSCAFG00020017552	TRIM39-RPP21	79	87.437	ENSSHAG00000005422	TRIM39-RPP21	99	87.437	Sarcophilus_harrisii
ENSCAFG00020017552	TRIM39-RPP21	100	99.801	ENSVVUG00000009510	TRIM39-RPP21	100	99.801	Vulpes_vulpes