EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020017577 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 4060 bases
Position: chrQKWQ01000714.1:10356498-10360557
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020022225	RRM_1	PF00076.22	1.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020025739	-	342	-	ENSCAFP00020022225	113 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020017577's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020017577's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020017577	-	70	50.000	ENSCAFG00020008142	HNRNPA0	51	50.000
ENSCAFG00020017577	-	55	41.270	ENSCAFG00020025109	-	77	41.270
ENSCAFG00020017577	-	66	32.895	ENSCAFG00020021344	-	84	32.895
ENSCAFG00020017577	-	60	51.471	ENSCAFG00020013754	-	58	51.471
ENSCAFG00020017577	-	61	53.623	ENSCAFG00020011757	-	69	53.623
ENSCAFG00020017577	-	69	82.051	ENSCAFG00020006299	-	56	82.051

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020017577	-	69	96.154	ENSG00000135486	HNRNPA1	68	96.154	Homo_sapiens
ENSCAFG00020017577	-	69	83.333	ENSAMEG00000006838	-	66	83.333	Ailuropoda_melanoleuca
ENSCAFG00020017577	-	69	77.586	ENSACIG00000020389	HNRNPA1P48	66	75.641	Amphilophus_citrinellus
ENSCAFG00020017577	-	69	84.615	ENSACIG00000012946	hnrnpa1b	53	84.615	Amphilophus_citrinellus
ENSCAFG00020017577	-	69	93.590	ENSANAG00000034842	-	50	93.590	Aotus_nancymaae
ENSCAFG00020017577	-	69	87.179	ENSANAG00000033447	-	50	87.179	Aotus_nancymaae
ENSCAFG00020017577	-	69	96.154	ENSANAG00000023645	-	58	96.154	Aotus_nancymaae
ENSCAFG00020017577	-	70	55.128	ENSAMXG00000024951	-	57	55.128	Astyanax_mexicanus
ENSCAFG00020017577	-	67	32.895	ENSBTAG00000052568	-	58	32.895	Bos_taurus
ENSCAFG00020017577	-	69	96.154	ENSCJAG00000018864	-	58	96.154	Callithrix_jacchus
ENSCAFG00020017577	-	69	88.462	ENSCAFG00000017316	-	50	88.462	Canis_familiaris
ENSCAFG00020017577	-	69	89.744	ENSCAFG00000019097	-	52	89.744	Canis_familiaris
ENSCAFG00020017577	-	69	92.308	ENSCHIG00000015099	-	69	92.308	Capra_hircus
ENSCAFG00020017577	-	69	96.154	ENSTSYG00000012949	-	52	96.154	Carlito_syrichta
ENSCAFG00020017577	-	77	76.136	ENSCCAG00000029939	-	53	76.136	Cebus_capucinus
ENSCAFG00020017577	-	69	92.308	ENSCCAG00000033451	-	51	92.308	Cebus_capucinus
ENSCAFG00020017577	-	71	92.308	ENSCCAG00000019706	-	53	92.308	Cebus_capucinus
ENSCAFG00020017577	-	69	91.429	ENSCCAG00000028483	-	53	91.429	Cebus_capucinus
ENSCAFG00020017577	-	69	96.154	ENSCATG00000043560	-	58	96.154	Cercocebus_atys
ENSCAFG00020017577	-	69	92.308	ENSCATG00000041877	-	51	92.308	Cercocebus_atys
ENSCAFG00020017577	-	69	82.051	ENSCSAG00000014797	-	50	82.051	Chlorocebus_sabaeus
ENSCAFG00020017577	-	69	96.154	ENSCPBG00000022326	-	52	96.154	Chrysemys_picta_bellii
ENSCAFG00020017577	-	69	96.154	ENSCANG00000041992	HNRNPA1	58	96.154	Colobus_angolensis_palliatus
ENSCAFG00020017577	-	69	94.286	ENSCANG00000040983	-	57	94.286	Colobus_angolensis_palliatus
ENSCAFG00020017577	-	69	96.154	ENSCANG00000028832	-	57	96.154	Colobus_angolensis_palliatus
ENSCAFG00020017577	-	69	62.821	ENSDNOG00000033368	-	50	62.821	Dasypus_novemcinctus
ENSCAFG00020017577	-	69	91.026	ENSDNOG00000040960	-	50	91.026	Dasypus_novemcinctus
ENSCAFG00020017577	-	69	92.308	ENSDNOG00000034908	-	57	92.308	Dasypus_novemcinctus
ENSCAFG00020017577	-	66	88.000	ENSDNOG00000036647	-	82	88.000	Dasypus_novemcinctus
ENSCAFG00020017577	-	69	96.667	ENSDORG00000029266	-	52	96.667	Dipodomys_ordii
ENSCAFG00020017577	-	83	56.410	ENSEBUG00000008843	hnrnpa1b	59	56.410	Eptatretus_burgeri
ENSCAFG00020017577	-	69	94.872	ENSEASG00005023455	-	62	94.872	Equus_asinus_asinus
ENSCAFG00020017577	-	69	96.154	ENSEASG00005010182	HNRNPA1	51	96.154	Equus_asinus_asinus
ENSCAFG00020017577	-	69	96.154	ENSECAG00000028129	-	51	96.154	Equus_caballus
ENSCAFG00020017577	-	69	93.590	ENSEEUG00000000494	-	58	93.590	Erinaceus_europaeus
ENSCAFG00020017577	-	69	87.179	ENSEEUG00000011837	-	53	87.179	Erinaceus_europaeus
ENSCAFG00020017577	-	69	85.897	ENSEEUG00000009941	-	60	85.897	Erinaceus_europaeus
ENSCAFG00020017577	-	69	93.590	ENSEEUG00000006130	-	58	93.590	Erinaceus_europaeus
ENSCAFG00020017577	-	70	53.846	ENSELUG00000014398	-	53	53.846	Esox_lucius
ENSCAFG00020017577	-	69	85.714	ENSFCAG00000012001	-	73	85.714	Felis_catus
ENSCAFG00020017577	-	69	96.154	ENSFCAG00000010150	HNRNPA1	58	96.154	Felis_catus
ENSCAFG00020017577	-	69	94.872	ENSFCAG00000035826	-	75	94.872	Felis_catus
ENSCAFG00020017577	-	69	89.744	ENSFCAG00000028796	-	74	89.744	Felis_catus
ENSCAFG00020017577	-	70	91.139	ENSFCAG00000042512	-	74	91.139	Felis_catus
ENSCAFG00020017577	-	70	58.974	ENSGAFG00000016679	-	52	58.974	Gambusia_affinis
ENSCAFG00020017577	-	75	93.590	ENSGGOG00000003040	-	52	93.590	Gorilla_gorilla
ENSCAFG00020017577	-	69	93.590	ENSHGLG00100001909	-	51	93.590	Heterocephalus_glaber_male
ENSCAFG00020017577	-	69	60.784	ENSHCOG00000019526	hnrnpa1b	61	60.784	Hippocampus_comes
ENSCAFG00020017577	-	69	78.205	ENSIPUG00000022432	hnrnpa1b	53	78.205	Ictalurus_punctatus
ENSCAFG00020017577	-	69	92.105	ENSSTOG00000031228	-	56	92.105	Ictidomys_tridecemlineatus
ENSCAFG00020017577	-	69	82.051	ENSJJAG00000002566	-	50	82.051	Jaculus_jaculus
ENSCAFG00020017577	-	70	58.974	ENSKMAG00000010760	-	51	58.974	Kryptolebias_marmoratus
ENSCAFG00020017577	-	70	60.256	ENSLACG00000011242	-	51	60.256	Latimeria_chalumnae
ENSCAFG00020017577	-	69	91.026	ENSLAFG00000026657	-	56	91.026	Loxodonta_africana
ENSCAFG00020017577	-	69	93.590	ENSLAFG00000030769	-	70	93.590	Loxodonta_africana
ENSCAFG00020017577	-	69	91.026	ENSMFAG00000043804	-	57	91.026	Macaca_fascicularis
ENSCAFG00020017577	-	69	94.872	ENSMFAG00000037113	-	50	94.872	Macaca_fascicularis
ENSCAFG00020017577	-	69	96.154	ENSMFAG00000031561	HNRNPA1	58	96.154	Macaca_fascicularis
ENSCAFG00020017577	-	69	96.154	ENSMMUG00000012989	HNRNPA1	58	96.154	Macaca_mulatta
ENSCAFG00020017577	-	69	80.769	ENSMMUG00000047451	-	75	80.769	Macaca_mulatta
ENSCAFG00020017577	-	69	97.436	ENSMMUG00000007887	-	52	97.436	Macaca_mulatta
ENSCAFG00020017577	-	69	94.872	ENSMMUG00000029402	-	80	94.872	Macaca_mulatta
ENSCAFG00020017577	-	69	96.154	ENSMNEG00000042992	HNRNPA1	58	96.154	Macaca_nemestrina
ENSCAFG00020017577	-	69	96.154	ENSMLEG00000044414	-	58	96.154	Mandrillus_leucophaeus
ENSCAFG00020017577	-	69	92.308	ENSMLEG00000039822	-	51	92.308	Mandrillus_leucophaeus
ENSCAFG00020017577	-	69	90.541	ENSMGAG00000007630	-	85	90.541	Meleagris_gallopavo
ENSCAFG00020017577	-	69	94.872	ENSMICG00000031175	-	50	94.872	Microcebus_murinus
ENSCAFG00020017577	-	69	96.154	ENSMICG00000032477	HNRNPA1	58	96.154	Microcebus_murinus
ENSCAFG00020017577	-	69	32.051	ENSMODG00000023422	-	62	32.051	Monodelphis_domestica
ENSCAFG00020017577	-	69	96.154	ENSMUSG00000046434	Hnrnpa1	58	96.154	Mus_musculus
ENSCAFG00020017577	-	69	96.154	ENSMPUG00000008058	-	57	96.154	Mustela_putorius_furo
ENSCAFG00020017577	-	65	43.902	ENSMPUG00000012635	-	52	43.902	Mustela_putorius_furo
ENSCAFG00020017577	-	69	92.308	ENSMPUG00000002619	-	57	92.308	Mustela_putorius_furo
ENSCAFG00020017577	-	69	92.308	ENSMPUG00000005940	-	59	92.308	Mustela_putorius_furo
ENSCAFG00020017577	-	69	93.590	ENSMPUG00000002828	-	57	93.590	Mustela_putorius_furo
ENSCAFG00020017577	-	69	91.026	ENSMPUG00000014372	-	55	91.026	Mustela_putorius_furo
ENSCAFG00020017577	-	69	82.051	ENSMLUG00000027180	-	57	82.051	Myotis_lucifugus
ENSCAFG00020017577	-	69	93.590	ENSMLUG00000000788	-	55	93.590	Myotis_lucifugus
ENSCAFG00020017577	-	69	93.590	ENSMLUG00000003232	-	50	93.590	Myotis_lucifugus
ENSCAFG00020017577	-	69	89.744	ENSMLUG00000030316	-	64	89.744	Myotis_lucifugus
ENSCAFG00020017577	-	77	77.586	ENSNBRG00000011082	HNRNPA1P48	66	75.641	Neolamprologus_brichardi
ENSCAFG00020017577	-	69	96.154	ENSNLEG00000017659	HNRNPA1	58	96.154	Nomascus_leucogenys
ENSCAFG00020017577	-	69	96.154	ENSODEG00000014833	-	50	96.154	Octodon_degus
ENSCAFG00020017577	-	69	94.872	ENSODEG00000005110	-	52	94.872	Octodon_degus
ENSCAFG00020017577	-	69	96.296	ENSOANG00000013708	-	71	96.296	Ornithorhynchus_anatinus
ENSCAFG00020017577	-	69	96.154	ENSOCUG00000023674	-	68	96.154	Oryctolagus_cuniculus
ENSCAFG00020017577	-	69	96.154	ENSOCUG00000021007	-	68	96.154	Oryctolagus_cuniculus
ENSCAFG00020017577	-	69	92.308	ENSOCUG00000021006	-	63	92.308	Oryctolagus_cuniculus
ENSCAFG00020017577	-	69	89.744	ENSOCUG00000022627	-	53	89.744	Oryctolagus_cuniculus
ENSCAFG00020017577	-	69	93.590	ENSOCUG00000023322	-	56	93.590	Oryctolagus_cuniculus
ENSCAFG00020017577	-	69	94.872	ENSOCUG00000022568	-	64	94.872	Oryctolagus_cuniculus
ENSCAFG00020017577	-	69	80.769	ENSOCUG00000029392	-	50	80.769	Oryctolagus_cuniculus
ENSCAFG00020017577	-	69	96.154	ENSOCUG00000013350	-	50	96.154	Oryctolagus_cuniculus
ENSCAFG00020017577	-	96	42.478	ENSORLG00000024157	-	58	42.478	Oryzias_latipes
ENSCAFG00020017577	-	96	42.478	ENSORLG00000026571	-	93	42.478	Oryzias_latipes
ENSCAFG00020017577	-	96	42.718	ENSORLG00015015204	-	78	42.718	Oryzias_latipes_hsok
ENSCAFG00020017577	-	70	60.294	ENSOMEG00000011670	-	85	60.294	Oryzias_melastigma
ENSCAFG00020017577	-	69	93.333	ENSOGAG00000026163	-	52	93.333	Otolemur_garnettii
ENSCAFG00020017577	-	88	62.264	ENSOARG00000013612	-	50	62.264	Ovis_aries
ENSCAFG00020017577	-	69	83.333	ENSOARG00000003049	-	57	83.333	Ovis_aries
ENSCAFG00020017577	-	68	96.000	ENSPPAG00000040581	-	60	96.000	Pan_paniscus
ENSCAFG00020017577	-	69	96.154	ENSPPAG00000018027	HNRNPA1	58	96.154	Pan_paniscus
ENSCAFG00020017577	-	67	74.026	ENSPPRG00000005026	-	66	74.026	Panthera_pardus
ENSCAFG00020017577	-	69	96.154	ENSPPRG00000012587	HNRNPA1	58	96.154	Panthera_pardus
ENSCAFG00020017577	-	69	75.641	ENSPPRG00000008329	-	54	75.641	Panthera_pardus
ENSCAFG00020017577	-	69	91.026	ENSPTIG00000019051	-	68	91.026	Panthera_tigris_altaica
ENSCAFG00020017577	-	69	96.053	ENSPTIG00000016796	-	57	96.053	Panthera_tigris_altaica
ENSCAFG00020017577	-	69	96.154	ENSPTIG00000015170	HNRNPA1	58	96.154	Panthera_tigris_altaica
ENSCAFG00020017577	-	69	96.154	ENSPTRG00000049417	HNRNPA1	58	96.154	Pan_troglodytes
ENSCAFG00020017577	-	69	96.154	ENSPANG00000010434	-	58	96.154	Papio_anubis
ENSCAFG00020017577	-	69	93.590	ENSPANG00000026020	-	51	93.590	Papio_anubis
ENSCAFG00020017577	-	69	91.026	ENSPKIG00000006240	hnrnpa1b	50	91.026	Paramormyrops_kingsleyae
ENSCAFG00020017577	-	69	92.308	ENSPKIG00000003028	hnrnpa1b	52	92.308	Paramormyrops_kingsleyae
ENSCAFG00020017577	-	70	58.974	ENSPKIG00000020290	-	50	58.974	Paramormyrops_kingsleyae
ENSCAFG00020017577	-	69	96.154	ENSPEMG00000012402	-	58	96.154	Peromyscus_maniculatus_bairdii
ENSCAFG00020017577	-	70	58.974	ENSPFOG00000020515	-	53	58.974	Poecilia_formosa
ENSCAFG00020017577	-	69	84.615	ENSPLAG00000013254	hnrnpa1b	68	84.615	Poecilia_latipinna
ENSCAFG00020017577	-	69	92.308	ENSPPYG00000017853	-	58	92.308	Pongo_abelii
ENSCAFG00020017577	-	69	91.026	ENSPCOG00000019318	-	51	91.026	Propithecus_coquereli
ENSCAFG00020017577	-	69	96.154	ENSPCOG00000015986	-	58	96.154	Propithecus_coquereli
ENSCAFG00020017577	-	69	84.615	ENSPCOG00000027833	-	55	84.615	Propithecus_coquereli
ENSCAFG00020017577	-	69	91.026	ENSPCOG00000021193	-	50	91.026	Propithecus_coquereli
ENSCAFG00020017577	-	69	93.590	ENSPCOG00000028658	-	50	93.590	Propithecus_coquereli
ENSCAFG00020017577	-	69	62.821	ENSPCOG00000014446	-	64	62.821	Propithecus_coquereli
ENSCAFG00020017577	-	69	84.615	ENSPNYG00000017019	hnrnpa1b	60	84.615	Pundamilia_nyererei
ENSCAFG00020017577	-	69	92.308	ENSRNOG00000051748	AABR07060628.1	65	92.308	Rattus_norvegicus
ENSCAFG00020017577	-	69	96.154	ENSRNOG00000036839	Hnrnpa1	50	96.154	Rattus_norvegicus
ENSCAFG00020017577	-	69	89.744	ENSRNOG00000011100	AABR07040947.1	66	89.744	Rattus_norvegicus
ENSCAFG00020017577	-	69	96.154	ENSRBIG00000029387	HNRNPA1	58	96.154	Rhinopithecus_bieti
ENSCAFG00020017577	-	69	76.923	ENSRROG00000028830	-	52	76.923	Rhinopithecus_roxellana
ENSCAFG00020017577	-	69	96.154	ENSRROG00000030782	-	58	96.154	Rhinopithecus_roxellana
ENSCAFG00020017577	-	69	96.154	ENSSBOG00000021192	-	50	96.154	Saimiri_boliviensis_boliviensis
ENSCAFG00020017577	-	69	92.308	ENSSBOG00000029172	-	52	92.308	Saimiri_boliviensis_boliviensis
ENSCAFG00020017577	-	69	91.026	ENSSBOG00000023068	-	52	91.026	Saimiri_boliviensis_boliviensis
ENSCAFG00020017577	-	69	94.872	ENSSBOG00000020034	-	58	94.872	Saimiri_boliviensis_boliviensis
ENSCAFG00020017577	-	69	73.077	ENSSARG00000008882	-	60	73.077	Sorex_araneus
ENSCAFG00020017577	-	69	78.205	ENSSARG00000010620	-	60	78.205	Sorex_araneus
ENSCAFG00020017577	-	69	78.205	ENSTNIG00000015047	hnrnpa1b	62	78.205	Tetraodon_nigroviridis
ENSCAFG00020017577	-	67	32.895	ENSVVUG00000024413	-	52	32.895	Vulpes_vulpes
ENSCAFG00020017577	-	84	74.359	ENSXCOG00000019224	HNRNPA1P48	66	74.359	Xiphophorus_couchianus