EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCAFG00020017685 (Gene tree)
Gene ID
112642723
Gene Symbol
PRDM5
Alias
PFM2
Full Name
PR/SET domain 5
Gene Type
protein_coding
Species
Canis_lupus_dingo
Status
putative
Strand
Minus strand
Length
198776 bases
Position
chrQKWQ01000159.1:555072-753847
Accession
112642723
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAFP00020022378zf-C2H2PF00096.269.1e-65111
ENSCAFP00020022378zf-C2H2PF00096.269.1e-65211
ENSCAFP00020022378zf-C2H2PF00096.269.1e-65311
ENSCAFP00020022378zf-C2H2PF00096.269.1e-65411
ENSCAFP00020022378zf-C2H2PF00096.269.1e-65511
ENSCAFP00020022378zf-C2H2PF00096.269.1e-65611
ENSCAFP00020022378zf-C2H2PF00096.269.1e-65711
ENSCAFP00020022378zf-C2H2PF00096.269.1e-65811
ENSCAFP00020022378zf-C2H2PF00096.269.1e-65911
ENSCAFP00020022378zf-C2H2PF00096.269.1e-651011
ENSCAFP00020022378zf-C2H2PF00096.269.1e-651111
ENSCAFP00020022381zf-C2H2PF00096.265.1e-61111
ENSCAFP00020022381zf-C2H2PF00096.265.1e-61211
ENSCAFP00020022381zf-C2H2PF00096.265.1e-61311
ENSCAFP00020022381zf-C2H2PF00096.265.1e-61411
ENSCAFP00020022381zf-C2H2PF00096.265.1e-61511
ENSCAFP00020022381zf-C2H2PF00096.265.1e-61611
ENSCAFP00020022381zf-C2H2PF00096.265.1e-61711
ENSCAFP00020022381zf-C2H2PF00096.265.1e-61811
ENSCAFP00020022381zf-C2H2PF00096.265.1e-61911
ENSCAFP00020022381zf-C2H2PF00096.265.1e-611011
ENSCAFP00020022381zf-C2H2PF00096.265.1e-611111
ENSCAFP00020022378zf-metPF12874.73.2e-2414
ENSCAFP00020022378zf-metPF12874.73.2e-2424
ENSCAFP00020022378zf-metPF12874.73.2e-2434
ENSCAFP00020022378zf-metPF12874.73.2e-2444
ENSCAFP00020022381zf-metPF12874.75.9e-2113
ENSCAFP00020022381zf-metPF12874.75.9e-2123
ENSCAFP00020022381zf-metPF12874.75.9e-2133
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAFT00020025904PRDM5-2012709-ENSCAFP00020022378630 (aa)XP_025276270UPI00004BCFD3
ENSCAFT00020025908PRDM5-2022616-ENSCAFP00020022381599 (aa)XP_025276273UPI00004BCFD4
Gene Model
Click here to download ENSCAFG00020017685's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020017685's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCAFG00020017685PRDM57740.989ENSCAFG00020009762ZNF2688541.005
ENSCAFG00020017685PRDM57338.247ENSCAFG00020000603MYNN5538.247
ENSCAFG00020017685PRDM58233.219ENSCAFG00020023398ZNF3179239.474
ENSCAFG00020017685PRDM57743.860ENSCAFG00020015152ZNF2367735.275
ENSCAFG00020017685PRDM59936.264ENSCAFG00020010152PRDM106032.174
ENSCAFG00020017685PRDM57440.942ENSCAFG00020017854ZNF7685541.447
ENSCAFG00020017685PRDM57337.281ENSCAFG00020005065-10036.170
ENSCAFG00020017685PRDM57637.736ENSCAFG00020000541ZNF4239437.736
ENSCAFG00020017685PRDM57340.702ENSCAFG00020015138ZNF718438.636
ENSCAFG00020017685PRDM59736.948ENSCAFG00020019155ZNF4085836.653
ENSCAFG00020017685PRDM58036.601ENSCAFG00020013089ZNF2349637.609
ENSCAFG00020017685PRDM57637.336ENSCAFG00020014940-9537.939
ENSCAFG00020017685PRDM57437.752ENSCAFG00020019077-8038.245
ENSCAFG00020017685PRDM57437.563ENSCAFG00020013058ZNF2356840.176
ENSCAFG00020017685PRDM56540.876ENSCAFG00020015384SNAI25740.876
ENSCAFG00020017685PRDM57341.633ENSCAFG00020023428ZNF8468641.199
ENSCAFG00020017685PRDM57336.986ENSCAFG00020021877ZFP647931.894
ENSCAFG00020017685PRDM57344.928ENSCAFG00020024945-5344.928
ENSCAFG00020017685PRDM57142.500ENSCAFG00020004719SNAI36238.519
ENSCAFG00020017685PRDM59442.353ENSCAFG00020024046PRDM126842.353
ENSCAFG00020017685PRDM57441.146ENSCAFG00020015487ZNF6285940.933
ENSCAFG00020017685PRDM59436.612ENSCAFG00020019570ZNF5999736.612
ENSCAFG00020017685PRDM57336.464ENSCAFG00020003589-7437.421
ENSCAFG00020017685PRDM56838.786ENSCAFG00020013111-7739.542
ENSCAFG00020017685PRDM57431.847ENSCAFG00020018148ZNF6467230.000
ENSCAFG00020017685PRDM57436.919ENSCAFG00020014950-8037.705
ENSCAFG00020017685PRDM57338.636ENSCAFG00020006282ZNF7709838.636
ENSCAFG00020017685PRDM57340.586ENSCAFG00020001547ZFP16639.113
ENSCAFG00020017685PRDM57431.920ENSCAFG00020009237ZNF3198833.162
ENSCAFG00020017685PRDM57435.294ENSCAFG00020005083-9835.780
ENSCAFG00020017685PRDM57238.624ENSCAFG00020009015ZNF1127638.624
ENSCAFG00020017685PRDM57336.631ENSCAFG00020019138ZNF1757736.631
ENSCAFG00020017685PRDM58536.765ENSCAFG00020014973ZNF5519634.817
ENSCAFG00020017685PRDM57240.141ENSCAFG00020013066ZNF2268340.141
ENSCAFG00020017685PRDM57339.080ENSCAFG00020014929-9837.701
ENSCAFG00020017685PRDM57334.132ENSCAFG00020017751MAZ6034.123
ENSCAFG00020017685PRDM57337.870ENSCAFG00020021363ZNF817837.870
ENSCAFG00020017685PRDM56944.144ENSCAFG00020027463-5444.144
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAFG00020017685PRDM510097.663ENSG00000138738PRDM510097.663Homo_sapiens
ENSCAFG00020017685PRDM510080.033ENSAPOG00000023220prdm510080.366Acanthochromis_polyacanthus
ENSCAFG00020017685PRDM59193.229ENSAMEG00000003050PRDM510093.403Ailuropoda_melanoleuca
ENSCAFG00020017685PRDM510078.500ENSACIG00000000406prdm510079.000Amphilophus_citrinellus
ENSCAFG00020017685PRDM510081.000ENSAOCG00000014806prdm510081.167Amphiprion_ocellaris
ENSCAFG00020017685PRDM510071.820ENSAPEG00000016846prdm510073.108Amphiprion_percula
ENSCAFG00020017685PRDM510080.500ENSATEG00000013829prdm510080.667Anabas_testudineus
ENSCAFG00020017685PRDM59584.718ENSAPLG00000013828PRDM510084.718Anas_platyrhynchos
ENSCAFG00020017685PRDM510079.048ENSACAG00000012999PRDM510079.048Anolis_carolinensis
ENSCAFG00020017685PRDM510098.734ENSANAG00000027411PRDM510098.734Aotus_nancymaae
ENSCAFG00020017685PRDM510080.667ENSACLG00000017996prdm510081.000Astatotilapia_calliptera
ENSCAFG00020017685PRDM58577.654ENSAMXG00000041864prdm59978.585Astyanax_mexicanus
ENSCAFG00020017685PRDM510096.825ENSBTAG00000012111PRDM510096.825Bos_taurus
ENSCAFG00020017685PRDM510098.734ENSCJAG00000003133PRDM510098.734Callithrix_jacchus
ENSCAFG00020017685PRDM59189.095ENSCAFG00000004179PRDM510087.931Canis_familiaris
ENSCAFG00020017685PRDM510096.494ENSCHIG00000018772PRDM510096.494Capra_hircus
ENSCAFG00020017685PRDM59596.330ENSTSYG00000009630PRDM59596.330Carlito_syrichta
ENSCAFG00020017685PRDM59198.000ENSCAPG00000015217PRDM510098.000Cavia_aperea
ENSCAFG00020017685PRDM59598.418ENSCPOG00000012883PRDM510098.418Cavia_porcellus
ENSCAFG00020017685PRDM510099.051ENSCCAG00000023157PRDM510099.051Cebus_capucinus
ENSCAFG00020017685PRDM510099.367ENSCATG00000042510PRDM510099.367Cercocebus_atys
ENSCAFG00020017685PRDM59598.418ENSCLAG00000005392PRDM510098.418Chinchilla_lanigera
ENSCAFG00020017685PRDM510097.663ENSCSAG00000003729PRDM510097.663Chlorocebus_sabaeus
ENSCAFG00020017685PRDM59994.400ENSCHOG00000007801PRDM59194.400Choloepus_hoffmanni
ENSCAFG00020017685PRDM510083.881ENSCPBG00000024735PRDM510083.881Chrysemys_picta_bellii
ENSCAFG00020017685PRDM510099.367ENSCANG00000036807PRDM510099.367Colobus_angolensis_palliatus
ENSCAFG00020017685PRDM510097.152ENSCGRG00001010581Prdm510097.152Cricetulus_griseus_chok1gshd
ENSCAFG00020017685PRDM59584.939ENSCGRG00000010996-9984.939Cricetulus_griseus_crigri
ENSCAFG00020017685PRDM510080.167ENSCSEG00000019979prdm510080.833Cynoglossus_semilaevis
ENSCAFG00020017685PRDM510074.485ENSCVAG00000013692prdm510074.960Cyprinodon_variegatus
ENSCAFG00020017685PRDM510077.215ENSDARG00000006288prdm510077.215Danio_rerio
ENSCAFG00020017685PRDM59197.391ENSDNOG00000002009PRDM510097.391Dasypus_novemcinctus
ENSCAFG00020017685PRDM510097.785ENSDORG00000007739Prdm510097.785Dipodomys_ordii
ENSCAFG00020017685PRDM59487.402ENSETEG00000020268PRDM59087.402Echinops_telfairi
ENSCAFG00020017685PRDM59972.074ENSEBUG00000004301prdm510072.742Eptatretus_burgeri
ENSCAFG00020017685PRDM510099.684ENSEASG00005018365PRDM510099.684Equus_asinus_asinus
ENSCAFG00020017685PRDM59997.856ENSECAG00000011516PRDM59097.243Equus_caballus
ENSCAFG00020017685PRDM510071.733ENSECAG00000024747-10085.583Equus_caballus
ENSCAFG00020017685PRDM59986.979ENSEEUG00000010306PRDM510086.979Erinaceus_europaeus
ENSCAFG00020017685PRDM59976.796ENSELUG00000005894prdm59377.348Esox_lucius
ENSCAFG00020017685PRDM510099.332ENSFCAG00000025656PRDM510099.332Felis_catus
ENSCAFG00020017685PRDM59979.128ENSFALG00000008381PRDM510079.128Ficedula_albicollis
ENSCAFG00020017685PRDM510098.734ENSFDAG00000021361PRDM510098.734Fukomys_damarensis
ENSCAFG00020017685PRDM510080.667ENSFHEG00000013040prdm510081.000Fundulus_heteroclitus
ENSCAFG00020017685PRDM59569.737ENSGMOG00000012038prdm510069.737Gadus_morhua
ENSCAFG00020017685PRDM510084.992ENSGALG00000011963PRDM510084.992Gallus_gallus
ENSCAFG00020017685PRDM59978.044ENSGAFG00000019233prdm510076.833Gambusia_affinis
ENSCAFG00020017685PRDM59982.375ENSGAGG00000020362PRDM59983.142Gopherus_agassizii
ENSCAFG00020017685PRDM510099.367ENSGGOG00000013562PRDM510099.367Gorilla_gorilla
ENSCAFG00020017685PRDM510080.667ENSHBUG00000023375prdm510081.167Haplochromis_burtoni
ENSCAFG00020017685PRDM510086.978ENSHGLG00000003010PRDM510091.152Heterocephalus_glaber_female
ENSCAFG00020017685PRDM510098.418ENSHGLG00100003696PRDM510098.418Heterocephalus_glaber_male
ENSCAFG00020017685PRDM510078.006ENSHCOG00000012131prdm59978.605Hippocampus_comes
ENSCAFG00020017685PRDM510080.667ENSIPUG00000001248prdm510080.833Ictalurus_punctatus
ENSCAFG00020017685PRDM59594.304ENSSTOG00000004741PRDM510094.304Ictidomys_tridecemlineatus
ENSCAFG00020017685PRDM59597.785ENSJJAG00000011464Prdm510097.785Jaculus_jaculus
ENSCAFG00020017685PRDM510080.333ENSKMAG00000013663prdm510080.500Kryptolebias_marmoratus
ENSCAFG00020017685PRDM510078.447ENSLBEG00000022736prdm510078.764Labrus_bergylta
ENSCAFG00020017685PRDM59282.322ENSLACG00000009187PRDM59982.842Latimeria_chalumnae
ENSCAFG00020017685PRDM510080.349ENSLOCG00000009778prdm59980.349Lepisosteus_oculatus
ENSCAFG00020017685PRDM510097.663ENSLAFG00000006532PRDM510097.663Loxodonta_africana
ENSCAFG00020017685PRDM510099.367ENSMFAG00000045845PRDM510099.367Macaca_fascicularis
ENSCAFG00020017685PRDM510099.367ENSMMUG00000003249PRDM510099.367Macaca_mulatta
ENSCAFG00020017685PRDM510099.367ENSMNEG00000019018PRDM510099.367Macaca_nemestrina
ENSCAFG00020017685PRDM59597.535ENSMLEG00000023145PRDM510097.535Mandrillus_leucophaeus
ENSCAFG00020017685PRDM510078.130ENSMAMG00000013419prdm510078.323Mastacembelus_armatus
ENSCAFG00020017685PRDM510080.667ENSMZEG00005020645prdm510081.167Maylandia_zebra
ENSCAFG00020017685PRDM59584.551ENSMGAG00000010710PRDM510084.551Meleagris_gallopavo
ENSCAFG00020017685PRDM510097.152ENSMAUG00000006768Prdm510097.152Mesocricetus_auratus
ENSCAFG00020017685PRDM510098.418ENSMICG00000001459PRDM510098.418Microcebus_murinus
ENSCAFG00020017685PRDM510097.152ENSMOCG00000016267Prdm510097.152Microtus_ochrogaster
ENSCAFG00020017685PRDM510080.833ENSMMOG00000006035prdm510080.833Mola_mola
ENSCAFG00020017685PRDM510080.569ENSMODG00000018942PRDM510080.569Monodelphis_domestica
ENSCAFG00020017685PRDM510077.500ENSMALG00000013934prdm510077.500Monopterus_albus
ENSCAFG00020017685PRDM510097.468MGP_CAROLIEiJ_G0028463Prdm510097.468Mus_caroli
ENSCAFG00020017685PRDM510097.152ENSMUSG00000029913Prdm510097.152Mus_musculus
ENSCAFG00020017685PRDM510097.468MGP_PahariEiJ_G0022203Prdm510097.468Mus_pahari
ENSCAFG00020017685PRDM510097.152MGP_SPRETEiJ_G0029467Prdm510097.152Mus_spretus
ENSCAFG00020017685PRDM510098.413ENSMPUG00000017415PRDM510098.413Mustela_putorius_furo
ENSCAFG00020017685PRDM59186.332ENSMLUG00000006097PRDM510086.332Myotis_lucifugus
ENSCAFG00020017685PRDM510097.785ENSNGAG00000018317Prdm510097.785Nannospalax_galili
ENSCAFG00020017685PRDM510071.757ENSNBRG00000004976prdm510077.076Neolamprologus_brichardi
ENSCAFG00020017685PRDM510099.367ENSNLEG00000009107PRDM510099.367Nomascus_leucogenys
ENSCAFG00020017685PRDM58489.831ENSMEUG00000006576-7189.831Notamacropus_eugenii
ENSCAFG00020017685PRDM58796.198ENSOPRG00000011066-8975.884Ochotona_princeps
ENSCAFG00020017685PRDM59998.734ENSODEG00000009133PRDM510098.734Octodon_degus
ENSCAFG00020017685PRDM510078.764ENSONIG00000003111prdm59979.239Oreochromis_niloticus
ENSCAFG00020017685PRDM59981.893ENSOANG00000015109PRDM59781.893Ornithorhynchus_anatinus
ENSCAFG00020017685PRDM57187.778ENSOANG00000006197-10087.778Ornithorhynchus_anatinus
ENSCAFG00020017685PRDM59388.586ENSOCUG00000013454PRDM510090.119Oryctolagus_cuniculus
ENSCAFG00020017685PRDM510080.500ENSORLG00000016247prdm510080.833Oryzias_latipes
ENSCAFG00020017685PRDM510080.667ENSORLG00020018051prdm510080.833Oryzias_latipes_hni
ENSCAFG00020017685PRDM510080.500ENSORLG00015013760prdm510080.833Oryzias_latipes_hsok
ENSCAFG00020017685PRDM510080.699ENSOMEG00000005143prdm510080.865Oryzias_melastigma
ENSCAFG00020017685PRDM58489.454ENSOGAG00000009996PRDM59888.972Otolemur_garnettii
ENSCAFG00020017685PRDM59593.625ENSOARG00000015473PRDM510095.186Ovis_aries
ENSCAFG00020017685PRDM59597.471ENSPPAG00000043045PRDM510097.471Pan_paniscus
ENSCAFG00020017685PRDM510099.165ENSPPRG00000001020PRDM510099.165Panthera_pardus
ENSCAFG00020017685PRDM59599.120ENSPTIG00000010807PRDM59599.120Panthera_tigris_altaica
ENSCAFG00020017685PRDM510099.367ENSPTRG00000016403PRDM510099.367Pan_troglodytes
ENSCAFG00020017685PRDM510099.367ENSPANG00000023612PRDM510099.367Papio_anubis
ENSCAFG00020017685PRDM510053.578ENSPKIG00000015492prdm510052.097Paramormyrops_kingsleyae
ENSCAFG00020017685PRDM510084.202ENSPSIG00000013505PRDM510084.202Pelodiscus_sinensis
ENSCAFG00020017685PRDM510077.167ENSPMGG00000012622prdm510077.667Periophthalmus_magnuspinnatus
ENSCAFG00020017685PRDM57371.845ENSPMAG00000005248prdm510071.845Petromyzon_marinus
ENSCAFG00020017685PRDM59875.936ENSPFOG00000018630prdm59976.203Poecilia_formosa
ENSCAFG00020017685PRDM510078.989ENSPLAG00000014148prdm510079.305Poecilia_latipinna
ENSCAFG00020017685PRDM510081.000ENSPMEG00000018002prdm510081.333Poecilia_mexicana
ENSCAFG00020017685PRDM510081.000ENSPREG00000018366prdm510081.333Poecilia_reticulata
ENSCAFG00020017685PRDM510097.302ENSPPYG00000015031PRDM510097.302Pongo_abelii
ENSCAFG00020017685PRDM59590.818ENSPCAG00000011671PRDM510090.818Procavia_capensis
ENSCAFG00020017685PRDM510098.418ENSPCOG00000022828PRDM510098.418Propithecus_coquereli
ENSCAFG00020017685PRDM59588.481ENSPVAG00000012309PRDM510088.481Pteropus_vampyrus
ENSCAFG00020017685PRDM510080.667ENSPNYG00000012194prdm510081.000Pundamilia_nyererei
ENSCAFG00020017685PRDM510080.500ENSPNAG00000026181prdm510081.333Pygocentrus_nattereri
ENSCAFG00020017685PRDM59375.722ENSPNAG00000023191-9975.850Pygocentrus_nattereri
ENSCAFG00020017685PRDM59990.305ENSRNOG00000023679Prdm59990.305Rattus_norvegicus
ENSCAFG00020017685PRDM510099.367ENSRBIG00000041307PRDM510099.367Rhinopithecus_bieti
ENSCAFG00020017685PRDM59485.280ENSRROG00000035343PRDM510086.978Rhinopithecus_roxellana
ENSCAFG00020017685PRDM510099.051ENSSBOG00000022100PRDM510099.051Saimiri_boliviensis_boliviensis
ENSCAFG00020017685PRDM59079.918ENSSHAG00000003250PRDM510080.123Sarcophilus_harrisii
ENSCAFG00020017685PRDM510075.772ENSSFOG00015020478prdm510075.772Scleropages_formosus
ENSCAFG00020017685PRDM510080.667ENSSMAG00000018844prdm510081.167Scophthalmus_maximus
ENSCAFG00020017685PRDM510080.667ENSSDUG00000020397prdm510081.000Seriola_dumerili
ENSCAFG00020017685PRDM510080.667ENSSLDG00000013353prdm510081.000Seriola_lalandi_dorsalis
ENSCAFG00020017685PRDM59598.291ENSSARG00000014129-8098.291Sorex_araneus
ENSCAFG00020017685PRDM510089.873ENSSPUG00000009941PRDM510089.873Sphenodon_punctatus
ENSCAFG00020017685PRDM510078.764ENSSPAG00000013866prdm510079.239Stegastes_partitus
ENSCAFG00020017685PRDM510098.331ENSSSCG00000009101PRDM510098.331Sus_scrofa
ENSCAFG00020017685PRDM59583.973ENSTGUG00000001920PRDM510083.973Taeniopygia_guttata
ENSCAFG00020017685PRDM510080.167ENSTRUG00000013850prdm510080.167Takifugu_rubripes
ENSCAFG00020017685PRDM510065.724ENSTNIG00000005901prdm510065.724Tetraodon_nigroviridis
ENSCAFG00020017685PRDM59591.781ENSTBEG00000015386PRDM58691.781Tupaia_belangeri
ENSCAFG00020017685PRDM510097.302ENSTTRG00000010996PRDM510097.302Tursiops_truncatus
ENSCAFG00020017685PRDM59597.436ENSUAMG00000009994PRDM58497.325Ursus_americanus
ENSCAFG00020017685PRDM59599.684ENSUMAG00000003733PRDM59999.684Ursus_maritimus
ENSCAFG00020017685PRDM59788.725ENSVPAG00000007435PRDM510088.725Vicugna_pacos
ENSCAFG00020017685PRDM59399.830ENSVVUG00000013192PRDM510099.830Vulpes_vulpes
ENSCAFG00020017685PRDM510079.081ENSXETG00000002101prdm510079.081Xenopus_tropicalis
ENSCAFG00020017685PRDM510080.667ENSXCOG00000008567prdm510081.000Xiphophorus_couchianus
ENSCAFG00020017685PRDM510080.667ENSXMAG00000013825prdm510081.000Xiphophorus_maculatus

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