EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020017742 (Gene tree)
Gene ID: 112644389
Gene Symbol: PNLDC1
Alias: FLJ40240|dJ195P10.2
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 17547 bases
Position: chrQKWQ01000848.1:49347405-49364951
Accession: 21185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020022484	CAF1	PF04857.20	8.9e-77	1	1
ENSCAFP00020022492	CAF1	PF04857.20	1.4e-69	1	1
ENSCAFP00020022486	CAF1	PF04857.20	2.4e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020026023	PNLDC1-201	1572	-	ENSCAFP00020022484	523 (aa)	-	-
ENSCAFT00020026025	PNLDC1-202	888	-	ENSCAFP00020022486	295 (aa)	-	-
ENSCAFT00020026031	PNLDC1-203	1014	-	ENSCAFP00020022492	337 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020017742's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020017742's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020017742	PNLDC1	99	86.064	ENSG00000146453	PNLDC1	99	86.064	Homo_sapiens
ENSCAFG00020017742	PNLDC1	99	93.032	ENSAMEG00000015371	PNLDC1	99	93.032	Ailuropoda_melanoleuca
ENSCAFG00020017742	PNLDC1	95	57.505	ENSAPLG00000007014	PNLDC1	98	57.505	Anas_platyrhynchos
ENSCAFG00020017742	PNLDC1	99	58.757	ENSACAG00000013667	PNLDC1	98	58.700	Anolis_carolinensis
ENSCAFG00020017742	PNLDC1	95	30.286	ENSACAG00000004973	PARN	53	31.143	Anolis_carolinensis
ENSCAFG00020017742	PNLDC1	100	84.803	ENSANAG00000034713	PNLDC1	100	85.380	Aotus_nancymaae
ENSCAFG00020017742	PNLDC1	55	41.071	ENSANAG00000023815	-	70	41.071	Aotus_nancymaae
ENSCAFG00020017742	PNLDC1	91	30.723	ENSAMXG00000012390	parn	52	30.408	Astyanax_mexicanus
ENSCAFG00020017742	PNLDC1	95	89.921	ENSBTAG00000015166	PNLDC1	96	89.921	Bos_taurus
ENSCAFG00020017742	PNLDC1	100	83.677	ENSCJAG00000011865	PNLDC1	100	83.725	Callithrix_jacchus
ENSCAFG00020017742	PNLDC1	100	97.175	ENSCAFG00000000740	PNLDC1	100	97.175	Canis_familiaris
ENSCAFG00020017742	PNLDC1	100	90.755	ENSCHIG00000003141	PNLDC1	100	90.755	Capra_hircus
ENSCAFG00020017742	PNLDC1	100	84.053	ENSTSYG00000005606	PNLDC1	100	84.053	Carlito_syrichta
ENSCAFG00020017742	PNLDC1	57	41.071	ENSTSYG00000011320	TOE1	76	37.705	Carlito_syrichta
ENSCAFG00020017742	PNLDC1	100	60.861	ENSCAPG00000011893	PNLDC1	100	60.861	Cavia_aperea
ENSCAFG00020017742	PNLDC1	100	77.154	ENSCPOG00000019565	PNLDC1	100	77.154	Cavia_porcellus
ENSCAFG00020017742	PNLDC1	55	41.071	ENSCCAG00000030245	TOE1	70	41.071	Cebus_capucinus
ENSCAFG00020017742	PNLDC1	100	84.803	ENSCCAG00000026232	PNLDC1	100	84.803	Cebus_capucinus
ENSCAFG00020017742	PNLDC1	54	41.071	ENSCATG00000038458	TOE1	71	41.071	Cercocebus_atys
ENSCAFG00020017742	PNLDC1	100	85.178	ENSCATG00000033196	PNLDC1	100	85.178	Cercocebus_atys
ENSCAFG00020017742	PNLDC1	94	88.291	ENSCLAG00000003228	PNLDC1	99	82.264	Chinchilla_lanigera
ENSCAFG00020017742	PNLDC1	97	85.078	ENSCSAG00000012478	PNLDC1	99	85.078	Chlorocebus_sabaeus
ENSCAFG00020017742	PNLDC1	93	68.153	ENSCPBG00000004050	PNLDC1	100	65.039	Chrysemys_picta_bellii
ENSCAFG00020017742	PNLDC1	79	30.034	ENSCPBG00000006609	PARN	50	30.034	Chrysemys_picta_bellii
ENSCAFG00020017742	PNLDC1	95	85.236	ENSCANG00000043076	PNLDC1	97	85.236	Colobus_angolensis_palliatus
ENSCAFG00020017742	PNLDC1	100	79.887	ENSCGRG00001007470	-	99	80.038	Cricetulus_griseus_chok1gshd
ENSCAFG00020017742	PNLDC1	100	64.190	ENSCGRG00001011981	-	99	64.190	Cricetulus_griseus_chok1gshd
ENSCAFG00020017742	PNLDC1	100	79.887	ENSCGRG00000010221	-	99	80.038	Cricetulus_griseus_crigri
ENSCAFG00020017742	PNLDC1	100	67.048	ENSCGRG00000003103	-	99	67.048	Cricetulus_griseus_crigri
ENSCAFG00020017742	PNLDC1	100	86.142	ENSDNOG00000013709	PNLDC1	100	86.142	Dasypus_novemcinctus
ENSCAFG00020017742	PNLDC1	93	88.217	ENSDORG00000011517	Pnldc1	100	88.217	Dipodomys_ordii
ENSCAFG00020017742	PNLDC1	93	75.152	ENSETEG00000007587	PNLDC1	99	75.152	Echinops_telfairi
ENSCAFG00020017742	PNLDC1	94	31.707	ENSEBUG00000008118	PNLDC1	61	31.707	Eptatretus_burgeri
ENSCAFG00020017742	PNLDC1	93	96.190	ENSEASG00005019029	PNLDC1	100	86.338	Equus_asinus_asinus
ENSCAFG00020017742	PNLDC1	100	91.714	ENSECAG00000012898	PNLDC1	100	91.714	Equus_caballus
ENSCAFG00020017742	PNLDC1	66	89.140	ENSEEUG00000005717	-	86	87.500	Erinaceus_europaeus
ENSCAFG00020017742	PNLDC1	100	93.032	ENSFCAG00000002848	PNLDC1	100	93.032	Felis_catus
ENSCAFG00020017742	PNLDC1	94	56.126	ENSFALG00000012081	PNLDC1	99	56.126	Ficedula_albicollis
ENSCAFG00020017742	PNLDC1	100	82.674	ENSFDAG00000021334	PNLDC1	100	82.674	Fukomys_damarensis
ENSCAFG00020017742	PNLDC1	93	59.554	ENSGALG00000011624	PNLDC1	82	57.720	Gallus_gallus
ENSCAFG00020017742	PNLDC1	99	65.530	ENSGAGG00000015276	PNLDC1	100	66.529	Gopherus_agassizii
ENSCAFG00020017742	PNLDC1	54	41.071	ENSGGOG00000003290	TOE1	70	41.071	Gorilla_gorilla
ENSCAFG00020017742	PNLDC1	100	85.902	ENSGGOG00000014077	PNLDC1	100	85.902	Gorilla_gorilla
ENSCAFG00020017742	PNLDC1	100	83.677	ENSHGLG00000006889	PNLDC1	100	83.677	Heterocephalus_glaber_female
ENSCAFG00020017742	PNLDC1	100	83.677	ENSHGLG00100018275	PNLDC1	100	83.677	Heterocephalus_glaber_male
ENSCAFG00020017742	PNLDC1	99	88.113	ENSSTOG00000005595	PNLDC1	99	88.113	Ictidomys_tridecemlineatus
ENSCAFG00020017742	PNLDC1	99	77.736	ENSJJAG00000009937	Pnldc1	99	77.736	Jaculus_jaculus
ENSCAFG00020017742	PNLDC1	97	30.447	ENSLOCG00000000715	parn	51	30.447	Lepisosteus_oculatus
ENSCAFG00020017742	PNLDC1	93	89.776	ENSLAFG00000030189	PNLDC1	92	89.776	Loxodonta_africana
ENSCAFG00020017742	PNLDC1	94	92.089	ENSMFAG00000041296	PNLDC1	100	85.929	Macaca_fascicularis
ENSCAFG00020017742	PNLDC1	54	41.071	ENSMFAG00000042312	TOE1	71	41.071	Macaca_fascicularis
ENSCAFG00020017742	PNLDC1	94	92.089	ENSMMUG00000004181	PNLDC1	100	85.929	Macaca_mulatta
ENSCAFG00020017742	PNLDC1	94	91.772	ENSMNEG00000034271	PNLDC1	100	85.741	Macaca_nemestrina
ENSCAFG00020017742	PNLDC1	94	91.456	ENSMLEG00000044059	PNLDC1	100	84.321	Mandrillus_leucophaeus
ENSCAFG00020017742	PNLDC1	95	57.510	ENSMGAG00000012470	PNLDC1	97	57.510	Meleagris_gallopavo
ENSCAFG00020017742	PNLDC1	99	64.098	ENSMAUG00000012298	Pnldc1	100	64.098	Mesocricetus_auratus
ENSCAFG00020017742	PNLDC1	100	86.654	ENSMICG00000008021	PNLDC1	100	86.492	Microcebus_murinus
ENSCAFG00020017742	PNLDC1	93	92.971	ENSMOCG00000014287	Pnldc1	100	85.178	Microtus_ochrogaster
ENSCAFG00020017742	PNLDC1	99	75.285	ENSMODG00000007420	PNLDC1	97	75.483	Monodelphis_domestica
ENSCAFG00020017742	PNLDC1	100	84.991	MGP_CAROLIEiJ_G0021045	Pnldc1	100	84.991	Mus_caroli
ENSCAFG00020017742	PNLDC1	100	85.553	ENSMUSG00000073460	Pnldc1	100	91.571	Mus_musculus
ENSCAFG00020017742	PNLDC1	100	85.366	MGP_PahariEiJ_G0023361	Pnldc1	100	85.366	Mus_pahari
ENSCAFG00020017742	PNLDC1	100	85.178	MGP_SPRETEiJ_G0021975	Pnldc1	100	85.178	Mus_spretus
ENSCAFG00020017742	PNLDC1	99	94.717	ENSMPUG00000004920	PNLDC1	99	94.717	Mustela_putorius_furo
ENSCAFG00020017742	PNLDC1	100	87.947	ENSMLUG00000000747	PNLDC1	100	87.947	Myotis_lucifugus
ENSCAFG00020017742	PNLDC1	100	85.929	ENSNGAG00000017714	Pnldc1	99	85.929	Nannospalax_galili
ENSCAFG00020017742	PNLDC1	97	83.977	ENSNLEG00000011282	PNLDC1	99	83.977	Nomascus_leucogenys
ENSCAFG00020017742	PNLDC1	68	63.478	ENSMEUG00000014042	-	100	68.403	Notamacropus_eugenii
ENSCAFG00020017742	PNLDC1	60	66.026	ENSMEUG00000011926	-	64	66.026	Notamacropus_eugenii
ENSCAFG00020017742	PNLDC1	79	88.636	ENSOPRG00000003813	PNLDC1	79	88.636	Ochotona_princeps
ENSCAFG00020017742	PNLDC1	100	82.364	ENSODEG00000008047	PNLDC1	100	82.364	Octodon_degus
ENSCAFG00020017742	PNLDC1	94	64.984	ENSOANG00000012199	PNLDC1	99	58.569	Ornithorhynchus_anatinus
ENSCAFG00020017742	PNLDC1	100	86.064	ENSOCUG00000013867	PNLDC1	100	86.064	Oryctolagus_cuniculus
ENSCAFG00020017742	PNLDC1	94	92.722	ENSOGAG00000007331	PNLDC1	99	87.170	Otolemur_garnettii
ENSCAFG00020017742	PNLDC1	97	30.226	ENSOGAG00000014626	PARN	71	30.226	Otolemur_garnettii
ENSCAFG00020017742	PNLDC1	100	89.811	ENSOARG00000004585	PNLDC1	100	89.811	Ovis_aries
ENSCAFG00020017742	PNLDC1	54	41.071	ENSPPAG00000043315	TOE1	70	41.071	Pan_paniscus
ENSCAFG00020017742	PNLDC1	100	85.526	ENSPPAG00000026651	PNLDC1	100	85.526	Pan_paniscus
ENSCAFG00020017742	PNLDC1	100	92.655	ENSPPRG00000012854	PNLDC1	100	92.655	Panthera_pardus
ENSCAFG00020017742	PNLDC1	99	90.962	ENSPTIG00000011501	PNLDC1	99	90.962	Panthera_tigris_altaica
ENSCAFG00020017742	PNLDC1	100	85.526	ENSPTRG00000018762	PNLDC1	100	85.526	Pan_troglodytes
ENSCAFG00020017742	PNLDC1	54	41.071	ENSPTRG00000000672	TOE1	70	41.071	Pan_troglodytes
ENSCAFG00020017742	PNLDC1	94	92.405	ENSPANG00000022009	PNLDC1	100	86.116	Papio_anubis
ENSCAFG00020017742	PNLDC1	97	30.056	ENSPSIG00000014804	PARN	55	30.056	Pelodiscus_sinensis
ENSCAFG00020017742	PNLDC1	79	64.530	ENSPSIG00000011419	PNLDC1	86	66.023	Pelodiscus_sinensis
ENSCAFG00020017742	PNLDC1	61	35.385	ENSPSIG00000010299	TOE1	70	35.385	Pelodiscus_sinensis
ENSCAFG00020017742	PNLDC1	100	85.741	ENSPEMG00000016301	Pnldc1	99	85.741	Peromyscus_maniculatus_bairdii
ENSCAFG00020017742	PNLDC1	91	32.153	ENSPMAG00000003956	parn	62	32.743	Petromyzon_marinus
ENSCAFG00020017742	PNLDC1	82	76.712	ENSPCIG00000023412	PNLDC1	100	76.712	Phascolarctos_cinereus
ENSCAFG00020017742	PNLDC1	96	88.545	ENSPPYG00000017148	PNLDC1	100	80.150	Pongo_abelii
ENSCAFG00020017742	PNLDC1	94	84.177	ENSPCAG00000014169	PNLDC1	99	78.113	Procavia_capensis
ENSCAFG00020017742	PNLDC1	100	86.116	ENSPCOG00000025722	PNLDC1	100	86.116	Propithecus_coquereli
ENSCAFG00020017742	PNLDC1	94	96.835	ENSPVAG00000005325	PNLDC1	70	97.305	Pteropus_vampyrus
ENSCAFG00020017742	PNLDC1	100	85.338	ENSRNOG00000023140	Pnldc1	99	87.421	Rattus_norvegicus
ENSCAFG00020017742	PNLDC1	97	30.000	ENSRNOG00000002912	Parn	82	39.286	Rattus_norvegicus
ENSCAFG00020017742	PNLDC1	100	85.929	ENSRBIG00000033806	PNLDC1	100	85.929	Rhinopithecus_bieti
ENSCAFG00020017742	PNLDC1	95	85.827	ENSRROG00000043919	PNLDC1	97	85.827	Rhinopithecus_roxellana
ENSCAFG00020017742	PNLDC1	55	41.071	ENSSBOG00000026044	-	70	41.071	Saimiri_boliviensis_boliviensis
ENSCAFG00020017742	PNLDC1	100	85.178	ENSSBOG00000019135	PNLDC1	100	85.178	Saimiri_boliviensis_boliviensis
ENSCAFG00020017742	PNLDC1	97	80.054	ENSSHAG00000015192	PNLDC1	96	75.150	Sarcophilus_harrisii
ENSCAFG00020017742	PNLDC1	64	31.429	ENSSPUG00000007719	PARN	55	30.252	Sphenodon_punctatus
ENSCAFG00020017742	PNLDC1	87	67.577	ENSSPUG00000004627	PNLDC1	99	68.304	Sphenodon_punctatus
ENSCAFG00020017742	PNLDC1	96	90.766	ENSSSCG00000004046	PNLDC1	99	90.766	Sus_scrofa
ENSCAFG00020017742	PNLDC1	91	57.377	ENSTGUG00000011418	PNLDC1	99	57.377	Taeniopygia_guttata
ENSCAFG00020017742	PNLDC1	96	75.391	ENSTBEG00000009131	PNLDC1	98	75.391	Tupaia_belangeri
ENSCAFG00020017742	PNLDC1	94	91.772	ENSTTRG00000010409	PNLDC1	70	86.792	Tursiops_truncatus
ENSCAFG00020017742	PNLDC1	99	83.519	ENSUAMG00000015783	PNLDC1	99	83.519	Ursus_americanus
ENSCAFG00020017742	PNLDC1	95	89.020	ENSUMAG00000011903	PNLDC1	99	89.020	Ursus_maritimus
ENSCAFG00020017742	PNLDC1	94	99.367	ENSVVUG00000006586	PNLDC1	99	97.125	Vulpes_vulpes
ENSCAFG00020017742	PNLDC1	89	30.556	ENSXETG00000010994	parn	50	30.556	Xenopus_tropicalis