EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020017913 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 1219 bases
Position: chrQKWQ01002178.1:45302576-45303794
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020022700	RRM_1	PF00076.22	2.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020026263	-	291	-	ENSCAFP00020022700	96 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020017913's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020017913's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020017913	-	90	100.000	ENSCAFG00020014898	SNRPA	84	100.000
ENSCAFG00020017913	-	85	68.293	ENSCAFG00020011358	-	93	68.293
ENSCAFG00020017913	-	82	31.646	ENSCAFG00020025576	SF3B6	54	31.646
ENSCAFG00020017913	-	85	95.122	ENSCAFG00020024265	-	72	88.764

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020017913	-	90	100.000	ENSG00000077312	SNRPA	94	100.000	Homo_sapiens
ENSCAFG00020017913	-	81	70.513	ENSAPOG00000015161	snrpb2	81	70.513	Acanthochromis_polyacanthus
ENSCAFG00020017913	-	81	70.513	ENSAPOG00000014688	-	81	70.513	Acanthochromis_polyacanthus
ENSCAFG00020017913	-	91	96.552	ENSCJAG00000045570	-	94	96.552	Callithrix_jacchus
ENSCAFG00020017913	-	90	94.186	ENSCAFG00000031370	-	52	94.186	Canis_familiaris
ENSCAFG00020017913	-	90	100.000	ENSCATG00000032716	SNRPA	90	95.349	Cercocebus_atys
ENSCAFG00020017913	-	90	100.000	ENSCANG00000038637	SNRPA	84	100.000	Colobus_angolensis_palliatus
ENSCAFG00020017913	-	90	100.000	ENSMFAG00000041710	SNRPA	90	95.349	Macaca_fascicularis
ENSCAFG00020017913	-	90	100.000	ENSMMUG00000022024	SNRPA	86	100.000	Macaca_mulatta
ENSCAFG00020017913	-	90	100.000	ENSMLEG00000039593	SNRPA	90	95.349	Mandrillus_leucophaeus
ENSCAFG00020017913	-	85	73.171	MGP_CAROLIEiJ_G0024372	Snrpb2	57	73.171	Mus_caroli
ENSCAFG00020017913	-	85	73.171	ENSMUSG00000008333	Snrpb2	57	73.171	Mus_musculus
ENSCAFG00020017913	-	85	73.171	MGP_PahariEiJ_G0025817	Snrpb2	57	73.171	Mus_pahari
ENSCAFG00020017913	-	85	73.171	MGP_SPRETEiJ_G0025291	Snrpb2	57	73.171	Mus_spretus
ENSCAFG00020017913	-	85	98.780	ENSODEG00000000626	-	83	98.780	Octodon_degus
ENSCAFG00020017913	-	90	100.000	ENSPANG00000023874	SNRPA	90	95.349	Papio_anubis
ENSCAFG00020017913	-	90	100.000	ENSPCOG00000025196	SNRPA	82	100.000	Propithecus_coquereli
ENSCAFG00020017913	-	90	100.000	ENSRBIG00000008335	SNRPA	84	100.000	Rhinopithecus_bieti
ENSCAFG00020017913	-	90	100.000	ENSRROG00000042727	SNRPA	84	100.000	Rhinopithecus_roxellana
ENSCAFG00020017913	-	90	33.721	YIR009W	MSL1	77	33.721	Saccharomyces_cerevisiae
ENSCAFG00020017913	-	90	100.000	ENSSBOG00000034722	SNRPA	59	100.000	Saimiri_boliviensis_boliviensis
ENSCAFG00020017913	-	85	100.000	ENSUAMG00000003002	-	89	100.000	Ursus_americanus
ENSCAFG00020017913	-	88	61.905	ENSUMAG00000000069	-	62	61.905	Ursus_maritimus
ENSCAFG00020017913	-	90	100.000	ENSVVUG00000005647	SNRPA	84	100.000	Vulpes_vulpes
ENSCAFG00020017913	-	85	93.902	ENSVVUG00000014183	-	79	87.640	Vulpes_vulpes
ENSCAFG00020017913	-	85	57.317	ENSXCOG00000012134	-	87	57.317	Xiphophorus_couchianus