EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020017926 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 28320 bases
Position: chrQKWQ01001821.1:35398028-35426347
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020022711	Nucleoplasmin	PF03066.15	7e-17	1	1
ENSCAFP00020022712	Nucleoplasmin	PF03066.15	7e-17	1	1
ENSCAFP00020022714	Nucleoplasmin	PF03066.15	7e-17	1	1
ENSCAFP00020022717	Nucleoplasmin	PF03066.15	7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020026277	-	1283	-	ENSCAFP00020022711	131 (aa)	-	-
ENSCAFT00020026280	-	1280	-	ENSCAFP00020022714	131 (aa)	-	-
ENSCAFT00020026278	-	1364	-	ENSCAFP00020022712	131 (aa)	-	-
ENSCAFT00020026283	-	1126	-	ENSCAFP00020022717	131 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020017926's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020017926's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020017926	-	99	80.000	ENSCAFG00020007666	-	52	70.000
ENSCAFG00020017926	-	99	69.231	ENSCAFG00020015194	-	55	69.231
ENSCAFG00020017926	-	89	79.487	ENSCAFG00020015318	-	52	69.231
ENSCAFG00020017926	-	97	84.252	ENSCAFG00020015227	-	55	72.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020017926	-	97	63.281	ENSG00000158806	NPM2	51	70.423	Homo_sapiens
ENSCAFG00020017926	-	96	69.048	ENSAMEG00000003542	-	57	68.462	Ailuropoda_melanoleuca
ENSCAFG00020017926	-	99	42.748	ENSAMEG00000001239	-	51	41.538	Ailuropoda_melanoleuca
ENSCAFG00020017926	-	97	64.844	ENSANAG00000038138	-	57	62.308	Aotus_nancymaae
ENSCAFG00020017926	-	97	63.281	ENSANAG00000028994	-	55	60.769	Aotus_nancymaae
ENSCAFG00020017926	-	99	63.846	ENSBTAG00000046918	NPM2	61	62.308	Bos_taurus
ENSCAFG00020017926	-	98	62.016	ENSCJAG00000020389	NPM2	57	60.938	Callithrix_jacchus
ENSCAFG00020017926	-	73	97.917	ENSCAFG00000009751	-	91	97.917	Canis_familiaris
ENSCAFG00020017926	-	99	61.538	ENSCHIG00000026056	NPM2	59	59.231	Capra_hircus
ENSCAFG00020017926	-	97	63.281	ENSTSYG00000026275	NPM2	57	63.359	Carlito_syrichta
ENSCAFG00020017926	-	97	55.906	ENSCAPG00000006057	NPM2	63	55.385	Cavia_aperea
ENSCAFG00020017926	-	97	55.906	ENSCPOG00000039799	NPM2	63	55.385	Cavia_porcellus
ENSCAFG00020017926	-	97	64.062	ENSCCAG00000035076	NPM2	56	63.077	Cebus_capucinus
ENSCAFG00020017926	-	97	64.062	ENSCATG00000031833	NPM2	57	63.077	Cercocebus_atys
ENSCAFG00020017926	-	98	53.906	ENSCLAG00000013600	NPM2	64	53.488	Chinchilla_lanigera
ENSCAFG00020017926	-	97	61.719	ENSCSAG00000016588	NPM2	63	64.062	Chlorocebus_sabaeus
ENSCAFG00020017926	-	73	60.000	ENSCHOG00000012753	-	71	59.184	Choloepus_hoffmanni
ENSCAFG00020017926	-	97	63.281	ENSCANG00000040109	NPM2	57	62.308	Colobus_angolensis_palliatus
ENSCAFG00020017926	-	99	54.615	ENSCGRG00001002208	Npm2	56	54.615	Cricetulus_griseus_chok1gshd
ENSCAFG00020017926	-	99	54.615	ENSCGRG00000005105	Npm2	56	54.615	Cricetulus_griseus_crigri
ENSCAFG00020017926	-	96	54.762	ENSDORG00000012371	Npm2	56	53.846	Dipodomys_ordii
ENSCAFG00020017926	-	95	65.600	ENSEASG00005018856	NPM2	65	65.385	Equus_asinus_asinus
ENSCAFG00020017926	-	95	70.635	ENSECAG00000024685	NPM2	57	64.615	Equus_caballus
ENSCAFG00020017926	-	95	75.200	ENSFCAG00000045117	NPM2	51	77.692	Felis_catus
ENSCAFG00020017926	-	97	56.693	ENSFDAG00000007971	NPM2	63	56.154	Fukomys_damarensis
ENSCAFG00020017926	-	98	43.939	ENSGAGG00000005236	NPM2	59	37.121	Gopherus_agassizii
ENSCAFG00020017926	-	97	63.281	ENSGGOG00000007071	NPM2	57	63.077	Gorilla_gorilla
ENSCAFG00020017926	-	89	51.282	ENSHGLG00000006243	NPM2	57	49.231	Heterocephalus_glaber_female
ENSCAFG00020017926	-	89	52.991	ENSHGLG00100005664	NPM2	58	51.538	Heterocephalus_glaber_male
ENSCAFG00020017926	-	97	64.567	ENSSTOG00000013623	NPM2	57	62.308	Ictidomys_tridecemlineatus
ENSCAFG00020017926	-	97	57.480	ENSJJAG00000018214	Npm2	55	56.154	Jaculus_jaculus
ENSCAFG00020017926	-	99	37.692	ENSLACG00000016196	NPM2	60	42.308	Latimeria_chalumnae
ENSCAFG00020017926	-	95	62.205	ENSLAFG00000015584	NPM2	57	56.923	Loxodonta_africana
ENSCAFG00020017926	-	97	64.062	ENSMFAG00000032098	NPM2	57	63.077	Macaca_fascicularis
ENSCAFG00020017926	-	97	64.062	ENSMNEG00000010994	NPM2	57	63.077	Macaca_nemestrina
ENSCAFG00020017926	-	97	64.062	ENSMLEG00000030071	NPM2	57	63.077	Mandrillus_leucophaeus
ENSCAFG00020017926	-	97	55.118	ENSMAUG00000004228	Npm2	56	54.615	Mesocricetus_auratus
ENSCAFG00020017926	-	95	63.200	ENSMOCG00000017251	Npm2	64	60.000	Microtus_ochrogaster
ENSCAFG00020017926	-	98	44.186	ENSMODG00000009677	-	63	44.186	Monodelphis_domestica
ENSCAFG00020017926	-	97	40.945	ENSMODG00000004175	-	67	40.157	Monodelphis_domestica
ENSCAFG00020017926	-	97	50.394	MGP_CAROLIEiJ_G0019492	Npm2	54	50.000	Mus_caroli
ENSCAFG00020017926	-	98	51.562	ENSMUSG00000047911	Npm2	65	51.562	Mus_musculus
ENSCAFG00020017926	-	97	53.543	MGP_PahariEiJ_G0030509	Npm2	54	53.077	Mus_pahari
ENSCAFG00020017926	-	97	51.181	MGP_SPRETEiJ_G0020384	Npm2	54	50.769	Mus_spretus
ENSCAFG00020017926	-	96	76.378	ENSMPUG00000004012	NPM2	58	74.809	Mustela_putorius_furo
ENSCAFG00020017926	-	95	73.228	ENSMLUG00000016075	NPM2	57	73.846	Myotis_lucifugus
ENSCAFG00020017926	-	97	65.354	ENSNGAG00000022056	Npm2	56	64.615	Nannospalax_galili
ENSCAFG00020017926	-	97	65.625	ENSNLEG00000035765	NPM2	57	63.077	Nomascus_leucogenys
ENSCAFG00020017926	-	98	54.688	ENSOPRG00000012940	NPM2	55	54.688	Ochotona_princeps
ENSCAFG00020017926	-	99	56.154	ENSODEG00000006433	NPM2	56	56.154	Octodon_degus
ENSCAFG00020017926	-	97	47.287	ENSOANG00000020262	-	54	46.970	Ornithorhynchus_anatinus
ENSCAFG00020017926	-	96	48.413	ENSOCUG00000021756	NPM2	56	48.462	Oryctolagus_cuniculus
ENSCAFG00020017926	-	89	61.017	ENSOGAG00000011562	NPM2	57	60.305	Otolemur_garnettii
ENSCAFG00020017926	-	97	63.780	ENSPPAG00000040749	NPM2	56	63.077	Pan_paniscus
ENSCAFG00020017926	-	95	73.600	ENSPPRG00000022157	NPM2	57	74.615	Panthera_pardus
ENSCAFG00020017926	-	99	71.538	ENSPTIG00000011553	NPM2	51	92.063	Panthera_tigris_altaica
ENSCAFG00020017926	-	97	64.567	ENSPTRG00000020045	NPM2	56	63.846	Pan_troglodytes
ENSCAFG00020017926	-	97	64.062	ENSPANG00000031080	NPM2	57	63.077	Papio_anubis
ENSCAFG00020017926	-	55	51.389	ENSPSIG00000007722	NPM2	54	36.923	Pelodiscus_sinensis
ENSCAFG00020017926	-	95	57.600	ENSPEMG00000013368	Npm2	55	53.846	Peromyscus_maniculatus_bairdii
ENSCAFG00020017926	-	98	42.484	ENSPCIG00000012716	-	71	43.791	Phascolarctos_cinereus
ENSCAFG00020017926	-	82	64.220	ENSPPYG00000018408	NPM2	56	63.063	Pongo_abelii
ENSCAFG00020017926	-	96	68.750	ENSPVAG00000009848	NPM2	63	68.182	Pteropus_vampyrus
ENSCAFG00020017926	-	99	53.846	ENSRNOG00000025638	Npm2	55	53.846	Rattus_norvegicus
ENSCAFG00020017926	-	97	63.281	ENSRBIG00000029235	NPM2	57	62.308	Rhinopithecus_bieti
ENSCAFG00020017926	-	97	63.281	ENSRROG00000044119	NPM2	57	62.308	Rhinopithecus_roxellana
ENSCAFG00020017926	-	97	62.500	ENSSBOG00000025301	NPM2	56	61.538	Saimiri_boliviensis_boliviensis
ENSCAFG00020017926	-	100	73.485	ENSSSCG00000009610	NPM2	69	73.485	Sus_scrofa
ENSCAFG00020017926	-	72	71.579	ENSTTRG00000008050	-	73	69.697	Tursiops_truncatus
ENSCAFG00020017926	-	99	77.692	ENSVVUG00000007256	-	53	68.462	Vulpes_vulpes
ENSCAFG00020017926	-	97	91.406	ENSVVUG00000021949	-	58	91.603	Vulpes_vulpes