EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020018628 (Gene tree)
Gene ID: 112643568
Gene Symbol: RBM42
Alias: MGC10433
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 7947 bases
Position: chrQKWQ01000848.1:117531764-117539710
Accession: 28117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020023718	RRM_1	PF00076.22	6.3e-18	1	1
ENSCAFP00020023710	RRM_1	PF00076.22	7.2e-18	1	1
ENSCAFP00020023686	RRM_1	PF00076.22	7.2e-18	1	1
ENSCAFP00020023707	RRM_1	PF00076.22	7.8e-18	1	1
ENSCAFP00020023725	RRM_1	PF00076.22	6.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020027387	RBM42-202	1407	-	ENSCAFP00020023707	468 (aa)	-	-
ENSCAFT00020027366	RBM42-201	1332	-	ENSCAFP00020023686	443 (aa)	-	-
ENSCAFT00020027390	RBM42-203	1341	-	ENSCAFP00020023710	446 (aa)	-	-
ENSCAFT00020027407	RBM42-205	507	-	ENSCAFP00020023725	168 (aa)	-	-
ENSCAFT00020027423	RBM42-206	1122	-	ENSCAFP00020023739	373 (aa)	-	-
ENSCAFT00020027398	RBM42-204	1203	-	ENSCAFP00020023718	400 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020018628's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020018628's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020018628	RBM42	96	100.000	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSCAFG00020018628	RBM42	96	100.000	ENSAMEG00000000524	RBM42	100	92.276	Ailuropoda_melanoleuca
ENSCAFG00020018628	RBM42	81	95.775	ENSACAG00000005495	RBM42	99	50.000	Anolis_carolinensis
ENSCAFG00020018628	RBM42	96	100.000	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSCAFG00020018628	RBM42	100	96.739	ENSBTAG00000013440	RBM42	100	91.868	Bos_taurus
ENSCAFG00020018628	RBM42	96	100.000	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSCAFG00020018628	RBM42	96	100.000	ENSCHIG00000009518	RBM42	100	91.741	Capra_hircus
ENSCAFG00020018628	RBM42	96	100.000	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSCAFG00020018628	RBM42	81	90.415	ENSCAPG00000009566	RBM42	99	90.415	Cavia_aperea
ENSCAFG00020018628	RBM42	96	100.000	ENSCPOG00000012365	RBM42	99	91.405	Cavia_porcellus
ENSCAFG00020018628	RBM42	96	100.000	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSCAFG00020018628	RBM42	96	100.000	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSCAFG00020018628	RBM42	96	100.000	ENSCLAG00000012865	RBM42	99	90.776	Chinchilla_lanigera
ENSCAFG00020018628	RBM42	96	100.000	ENSCSAG00000004422	RBM42	100	90.687	Chlorocebus_sabaeus
ENSCAFG00020018628	RBM42	100	81.342	ENSCANG00000030272	RBM42	100	81.342	Colobus_angolensis_palliatus
ENSCAFG00020018628	RBM42	96	100.000	ENSCGRG00001018540	Rbm42	100	89.823	Cricetulus_griseus_chok1gshd
ENSCAFG00020018628	RBM42	96	100.000	ENSDNOG00000037397	RBM42	100	87.708	Dasypus_novemcinctus
ENSCAFG00020018628	RBM42	94	93.846	ENSDORG00000013001	Rbm42	99	90.147	Dipodomys_ordii
ENSCAFG00020018628	RBM42	83	91.304	ENSETEG00000007878	RBM42	74	91.304	Echinops_telfairi
ENSCAFG00020018628	RBM42	96	100.000	ENSEASG00005001074	RBM42	100	91.518	Equus_asinus_asinus
ENSCAFG00020018628	RBM42	96	100.000	ENSECAG00000018215	RBM42	100	91.518	Equus_caballus
ENSCAFG00020018628	RBM42	100	97.826	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSCAFG00020018628	RBM42	90	100.000	ENSFDAG00000007440	RBM42	100	87.665	Fukomys_damarensis
ENSCAFG00020018628	RBM42	76	97.183	ENSGAGG00000014805	RBM42	55	91.892	Gopherus_agassizii
ENSCAFG00020018628	RBM42	96	100.000	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSCAFG00020018628	RBM42	90	100.000	ENSHGLG00000008418	RBM42	99	89.308	Heterocephalus_glaber_female
ENSCAFG00020018628	RBM42	90	100.000	ENSHGLG00100018667	RBM42	99	89.308	Heterocephalus_glaber_male
ENSCAFG00020018628	RBM42	96	100.000	ENSSTOG00000013050	RBM42	100	90.356	Ictidomys_tridecemlineatus
ENSCAFG00020018628	RBM42	96	100.000	ENSJJAG00000010421	Rbm42	99	89.518	Jaculus_jaculus
ENSCAFG00020018628	RBM42	88	98.485	ENSLAFG00000014993	RBM42	99	85.954	Loxodonta_africana
ENSCAFG00020018628	RBM42	96	100.000	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSCAFG00020018628	RBM42	100	100.000	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSCAFG00020018628	RBM42	96	100.000	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSCAFG00020018628	RBM42	100	100.000	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSCAFG00020018628	RBM42	100	96.739	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSCAFG00020018628	RBM42	96	100.000	ENSMOCG00000000405	Rbm42	99	90.566	Microtus_ochrogaster
ENSCAFG00020018628	RBM42	79	100.000	ENSMODG00000013957	RBM42	83	74.639	Monodelphis_domestica
ENSCAFG00020018628	RBM42	96	100.000	MGP_CAROLIEiJ_G0029536	Rbm42	99	90.566	Mus_caroli
ENSCAFG00020018628	RBM42	96	100.000	ENSMUSG00000036733	Rbm42	99	90.566	Mus_musculus
ENSCAFG00020018628	RBM42	96	100.000	MGP_PahariEiJ_G0012770	Rbm42	99	90.566	Mus_pahari
ENSCAFG00020018628	RBM42	96	100.000	MGP_SPRETEiJ_G0030632	Rbm42	99	90.566	Mus_spretus
ENSCAFG00020018628	RBM42	96	100.000	ENSMPUG00000006288	RBM42	100	92.634	Mustela_putorius_furo
ENSCAFG00020018628	RBM42	96	100.000	ENSMLUG00000011334	RBM42	100	90.985	Myotis_lucifugus
ENSCAFG00020018628	RBM42	96	100.000	ENSNGAG00000019698	Rbm42	99	90.356	Nannospalax_galili
ENSCAFG00020018628	RBM42	82	82.883	ENSNLEG00000011272	-	99	78.307	Nomascus_leucogenys
ENSCAFG00020018628	RBM42	87	100.000	ENSMEUG00000016300	RBM42	100	74.691	Notamacropus_eugenii
ENSCAFG00020018628	RBM42	96	100.000	ENSOPRG00000001229	RBM42	100	85.744	Ochotona_princeps
ENSCAFG00020018628	RBM42	96	100.000	ENSODEG00000013705	RBM42	99	90.985	Octodon_degus
ENSCAFG00020018628	RBM42	96	100.000	ENSOCUG00000003337	RBM42	100	88.865	Oryctolagus_cuniculus
ENSCAFG00020018628	RBM42	96	100.000	ENSOGAG00000004144	RBM42	100	90.566	Otolemur_garnettii
ENSCAFG00020018628	RBM42	95	100.000	ENSOARG00000004926	RBM42	98	86.765	Ovis_aries
ENSCAFG00020018628	RBM42	96	100.000	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSCAFG00020018628	RBM42	100	97.826	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSCAFG00020018628	RBM42	100	97.826	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSCAFG00020018628	RBM42	96	100.000	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSCAFG00020018628	RBM42	96	100.000	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSCAFG00020018628	RBM42	96	100.000	ENSPEMG00000012065	Rbm42	100	90.487	Peromyscus_maniculatus_bairdii
ENSCAFG00020018628	RBM42	79	100.000	ENSPCIG00000015737	RBM42	100	75.439	Phascolarctos_cinereus
ENSCAFG00020018628	RBM42	96	100.000	ENSPPYG00000009871	RBM42	100	88.866	Pongo_abelii
ENSCAFG00020018628	RBM42	95	100.000	ENSPCAG00000013053	RBM42	88	92.308	Procavia_capensis
ENSCAFG00020018628	RBM42	100	96.739	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSCAFG00020018628	RBM42	82	82.934	ENSPCOG00000020672	RBM42	81	90.361	Propithecus_coquereli
ENSCAFG00020018628	RBM42	100	96.739	ENSPVAG00000012815	RBM42	100	92.243	Pteropus_vampyrus
ENSCAFG00020018628	RBM42	96	100.000	ENSRNOG00000024278	Rbm42	99	90.776	Rattus_norvegicus
ENSCAFG00020018628	RBM42	96	100.000	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSCAFG00020018628	RBM42	96	100.000	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSCAFG00020018628	RBM42	85	91.379	ENSSBOG00000030666	RBM42	100	91.379	Saimiri_boliviensis_boliviensis
ENSCAFG00020018628	RBM42	95	80.702	ENSSARG00000010724	RBM42	100	81.042	Sorex_araneus
ENSCAFG00020018628	RBM42	96	100.000	ENSSSCG00000002905	RBM42	100	90.776	Sus_scrofa
ENSCAFG00020018628	RBM42	96	100.000	ENSUAMG00000020711	RBM42	100	92.453	Ursus_americanus
ENSCAFG00020018628	RBM42	96	100.000	ENSUMAG00000020223	RBM42	100	92.453	Ursus_maritimus
ENSCAFG00020018628	RBM42	96	100.000	ENSVVUG00000015117	RBM42	100	92.825	Vulpes_vulpes