EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020018882 (Gene tree)
Gene ID: 112655645
Gene Symbol: CASC3
Alias: BTZ|MLN51
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 22087 bases
Position: chrQKWQ01000972.1:4284593-4306679
Accession: 17040
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020024089	Btz	PF09405.10	1.1e-23	1	1
ENSCAFP00020024077	Btz	PF09405.10	1.3e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020027805	CASC3-201	2115	-	ENSCAFP00020024077	704 (aa)	-	-
ENSCAFT00020027819	CASC3-202	1929	-	ENSCAFP00020024089	642 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020018882's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020018882's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020018882	CASC3	100	94.460	ENSG00000108349	CASC3	100	94.460	Homo_sapiens
ENSCAFG00020018882	CASC3	100	97.443	ENSAMEG00000007764	CASC3	100	97.443	Ailuropoda_melanoleuca
ENSCAFG00020018882	CASC3	78	50.808	ENSACIG00000000720	casc3	83	50.471	Amphilophus_citrinellus
ENSCAFG00020018882	CASC3	83	52.733	ENSAOCG00000016676	casc3	77	52.475	Amphiprion_ocellaris
ENSCAFG00020018882	CASC3	83	52.733	ENSAPEG00000006787	casc3	77	52.475	Amphiprion_percula
ENSCAFG00020018882	CASC3	80	53.648	ENSATEG00000017196	casc3	71	52.903	Anabas_testudineus
ENSCAFG00020018882	CASC3	91	71.779	ENSACAG00000002674	CASC3	99	66.530	Anolis_carolinensis
ENSCAFG00020018882	CASC3	99	87.906	ENSANAG00000034820	-	99	87.906	Aotus_nancymaae
ENSCAFG00020018882	CASC3	72	97.642	ENSANAG00000031954	-	100	97.642	Aotus_nancymaae
ENSCAFG00020018882	CASC3	81	54.517	ENSACLG00000016198	casc3	80	54.455	Astatotilapia_calliptera
ENSCAFG00020018882	CASC3	81	60.191	ENSAMXG00000032452	casc3	77	56.646	Astyanax_mexicanus
ENSCAFG00020018882	CASC3	100	95.455	ENSBTAG00000006250	CASC3	100	95.455	Bos_taurus
ENSCAFG00020018882	CASC3	100	94.059	ENSCJAG00000016032	CASC3	100	92.614	Callithrix_jacchus
ENSCAFG00020018882	CASC3	100	100.000	ENSCAFG00000016141	CASC3	100	99.006	Canis_familiaris
ENSCAFG00020018882	CASC3	100	95.710	ENSCHIG00000006338	CASC3	100	95.028	Capra_hircus
ENSCAFG00020018882	CASC3	100	94.395	ENSTSYG00000002975	CASC3	100	87.642	Carlito_syrichta
ENSCAFG00020018882	CASC3	86	92.558	ENSCAPG00000010514	CASC3	100	89.610	Cavia_aperea
ENSCAFG00020018882	CASC3	100	88.779	ENSCPOG00000015139	CASC3	100	88.068	Cavia_porcellus
ENSCAFG00020018882	CASC3	100	93.069	ENSCCAG00000033620	CASC3	100	93.191	Cebus_capucinus
ENSCAFG00020018882	CASC3	100	95.184	ENSCATG00000033593	CASC3	100	95.184	Cercocebus_atys
ENSCAFG00020018882	CASC3	100	90.759	ENSCLAG00000013730	CASC3	100	89.915	Chinchilla_lanigera
ENSCAFG00020018882	CASC3	100	94.894	ENSCSAG00000002777	CASC3	100	94.894	Chlorocebus_sabaeus
ENSCAFG00020018882	CASC3	99	74.441	ENSCPBG00000004750	CASC3	95	78.422	Chrysemys_picta_bellii
ENSCAFG00020018882	CASC3	100	94.752	ENSCANG00000008814	CASC3	100	94.752	Colobus_angolensis_palliatus
ENSCAFG00020018882	CASC3	100	94.719	ENSCGRG00001014706	Casc3	100	92.756	Cricetulus_griseus_chok1gshd
ENSCAFG00020018882	CASC3	100	92.035	ENSCGRG00000001952	Casc3	100	85.227	Cricetulus_griseus_crigri
ENSCAFG00020018882	CASC3	90	51.592	ENSCSEG00000010047	casc3	56	64.375	Cynoglossus_semilaevis
ENSCAFG00020018882	CASC3	90	55.418	ENSCVAG00000014935	casc3	77	54.839	Cyprinodon_variegatus
ENSCAFG00020018882	CASC3	89	58.280	ENSDARG00000029911	casc3	93	46.853	Danio_rerio
ENSCAFG00020018882	CASC3	100	96.040	ENSDNOG00000017249	CASC3	96	94.602	Dasypus_novemcinctus
ENSCAFG00020018882	CASC3	100	90.099	ENSETEG00000013720	CASC3	100	86.080	Echinops_telfairi
ENSCAFG00020018882	CASC3	99	36.662	ENSEBUG00000010654	casc3	98	35.884	Eptatretus_burgeri
ENSCAFG00020018882	CASC3	100	96.370	ENSEASG00005002909	CASC3	100	96.393	Equus_asinus_asinus
ENSCAFG00020018882	CASC3	100	96.165	ENSECAG00000019947	CASC3	88	96.165	Equus_caballus
ENSCAFG00020018882	CASC3	70	93.729	ENSEEUG00000014253	CASC3	100	90.058	Erinaceus_europaeus
ENSCAFG00020018882	CASC3	79	58.255	ENSELUG00000015093	casc3	70	57.929	Esox_lucius
ENSCAFG00020018882	CASC3	100	97.640	ENSFCAG00000014998	CASC3	100	97.301	Felis_catus
ENSCAFG00020018882	CASC3	87	73.968	ENSFALG00000000412	CASC3	97	73.450	Ficedula_albicollis
ENSCAFG00020018882	CASC3	93	91.016	ENSFDAG00000020696	CASC3	100	88.298	Fukomys_damarensis
ENSCAFG00020018882	CASC3	86	54.310	ENSFHEG00000015793	casc3	77	52.581	Fundulus_heteroclitus
ENSCAFG00020018882	CASC3	99	70.365	ENSGALG00000031813	CASC3	99	70.638	Gallus_gallus
ENSCAFG00020018882	CASC3	80	52.381	ENSGAFG00000017148	casc3	67	49.675	Gambusia_affinis
ENSCAFG00020018882	CASC3	86	80.396	ENSGAGG00000008432	CASC3	93	79.856	Gopherus_agassizii
ENSCAFG00020018882	CASC3	100	94.318	ENSGGOG00000005067	CASC3	100	94.318	Gorilla_gorilla
ENSCAFG00020018882	CASC3	81	54.517	ENSHBUG00000013155	casc3	80	54.455	Haplochromis_burtoni
ENSCAFG00020018882	CASC3	100	91.419	ENSHGLG00000012117	CASC3	100	89.631	Heterocephalus_glaber_female
ENSCAFG00020018882	CASC3	86	93.519	ENSHGLG00100002268	CASC3	99	90.113	Heterocephalus_glaber_male
ENSCAFG00020018882	CASC3	90	47.902	ENSHCOG00000002664	casc3	76	48.136	Hippocampus_comes
ENSCAFG00020018882	CASC3	93	58.610	ENSIPUG00000002679	casc3	99	45.523	Ictalurus_punctatus
ENSCAFG00020018882	CASC3	100	95.380	ENSSTOG00000006374	CASC3	100	93.750	Ictidomys_tridecemlineatus
ENSCAFG00020018882	CASC3	100	90.560	ENSJJAG00000023525	Casc3	100	90.355	Jaculus_jaculus
ENSCAFG00020018882	CASC3	62	79.787	ENSKMAG00000019507	casc3	60	71.930	Kryptolebias_marmoratus
ENSCAFG00020018882	CASC3	74	67.133	ENSLBEG00000005435	casc3	76	51.447	Labrus_bergylta
ENSCAFG00020018882	CASC3	84	66.667	ENSLACG00000013200	CASC3	99	55.846	Latimeria_chalumnae
ENSCAFG00020018882	CASC3	75	73.786	ENSLOCG00000013518	casc3	71	70.874	Lepisosteus_oculatus
ENSCAFG00020018882	CASC3	100	93.510	ENSLAFG00000000606	CASC3	100	93.182	Loxodonta_africana
ENSCAFG00020018882	CASC3	100	95.184	ENSMFAG00000041496	CASC3	100	95.184	Macaca_fascicularis
ENSCAFG00020018882	CASC3	100	95.042	ENSMMUG00000045187	CASC3	100	95.184	Macaca_mulatta
ENSCAFG00020018882	CASC3	88	95.631	ENSMLEG00000029049	CASC3	97	95.631	Mandrillus_leucophaeus
ENSCAFG00020018882	CASC3	84	52.549	ENSMAMG00000005235	casc3	69	53.725	Mastacembelus_armatus
ENSCAFG00020018882	CASC3	81	54.517	ENSMZEG00005003815	casc3	80	54.455	Maylandia_zebra
ENSCAFG00020018882	CASC3	86	75.822	ENSMGAG00000013247	CASC3	99	74.309	Meleagris_gallopavo
ENSCAFG00020018882	CASC3	68	94.949	ENSMAUG00000006023	Casc3	90	91.740	Mesocricetus_auratus
ENSCAFG00020018882	CASC3	100	93.805	ENSMICG00000003321	CASC3	100	92.482	Microcebus_murinus
ENSCAFG00020018882	CASC3	100	94.059	ENSMOCG00000013644	Casc3	100	90.625	Microtus_ochrogaster
ENSCAFG00020018882	CASC3	86	52.424	ENSMMOG00000014339	casc3	99	43.075	Mola_mola
ENSCAFG00020018882	CASC3	99	84.731	ENSMODG00000013044	CASC3	92	78.754	Monodelphis_domestica
ENSCAFG00020018882	CASC3	75	49.425	ENSMALG00000019771	casc3	83	49.136	Monopterus_albus
ENSCAFG00020018882	CASC3	100	91.749	MGP_CAROLIEiJ_G0017099	Casc3	100	89.915	Mus_caroli
ENSCAFG00020018882	CASC3	100	91.749	ENSMUSG00000078676	Casc3	100	89.205	Mus_musculus
ENSCAFG00020018882	CASC3	100	91.419	MGP_SPRETEiJ_G0017943	Casc3	100	89.205	Mus_spretus
ENSCAFG00020018882	CASC3	100	97.360	ENSMPUG00000014903	CASC3	100	97.159	Mustela_putorius_furo
ENSCAFG00020018882	CASC3	100	94.389	ENSMLUG00000010520	CASC3	100	92.776	Myotis_lucifugus
ENSCAFG00020018882	CASC3	99	94.389	ENSNGAG00000023121	Casc3	100	90.199	Nannospalax_galili
ENSCAFG00020018882	CASC3	100	94.389	ENSNLEG00000001598	CASC3	100	93.608	Nomascus_leucogenys
ENSCAFG00020018882	CASC3	83	93.827	ENSMEUG00000015662	CASC3	100	70.821	Notamacropus_eugenii
ENSCAFG00020018882	CASC3	73	89.279	ENSOPRG00000007240	-	79	100.000	Ochotona_princeps
ENSCAFG00020018882	CASC3	100	91.503	ENSODEG00000017858	CASC3	100	89.392	Octodon_degus
ENSCAFG00020018882	CASC3	81	53.894	ENSONIG00000009337	casc3	99	48.664	Oreochromis_niloticus
ENSCAFG00020018882	CASC3	57	75.229	ENSOANG00000003499	-	82	69.697	Ornithorhynchus_anatinus
ENSCAFG00020018882	CASC3	100	95.050	ENSOCUG00000002954	CASC3	100	93.892	Oryctolagus_cuniculus
ENSCAFG00020018882	CASC3	83	53.355	ENSORLG00000023125	casc3	81	51.485	Oryzias_latipes
ENSCAFG00020018882	CASC3	100	94.719	ENSOGAG00000034486	CASC3	98	94.000	Otolemur_garnettii
ENSCAFG00020018882	CASC3	100	95.575	ENSOARG00000013239	CASC3	100	95.170	Ovis_aries
ENSCAFG00020018882	CASC3	100	94.719	ENSPPAG00000035069	CASC3	100	94.602	Pan_paniscus
ENSCAFG00020018882	CASC3	100	97.360	ENSPPRG00000023670	CASC3	100	97.301	Panthera_pardus
ENSCAFG00020018882	CASC3	91	96.552	ENSPTIG00000010891	CASC3	91	96.552	Panthera_tigris_altaica
ENSCAFG00020018882	CASC3	100	95.035	ENSPANG00000021708	CASC3	100	95.035	Papio_anubis
ENSCAFG00020018882	CASC3	83	57.386	ENSPKIG00000023186	casc3	98	45.226	Paramormyrops_kingsleyae
ENSCAFG00020018882	CASC3	100	93.729	ENSPEMG00000009774	Casc3	100	91.903	Peromyscus_maniculatus_bairdii
ENSCAFG00020018882	CASC3	100	81.161	ENSPCIG00000025678	CASC3	100	82.436	Phascolarctos_cinereus
ENSCAFG00020018882	CASC3	83	56.696	ENSPFOG00000017632	casc3	100	47.099	Poecilia_formosa
ENSCAFG00020018882	CASC3	88	52.549	ENSPLAG00000005268	casc3	77	53.746	Poecilia_latipinna
ENSCAFG00020018882	CASC3	68	47.239	ENSPMEG00000010299	casc3	73	49.115	Poecilia_mexicana
ENSCAFG00020018882	CASC3	75	67.143	ENSPREG00000011856	casc3	82	51.706	Poecilia_reticulata
ENSCAFG00020018882	CASC3	100	93.729	ENSPPYG00000008467	CASC3	100	94.176	Pongo_abelii
ENSCAFG00020018882	CASC3	100	93.805	ENSPCOG00000008183	CASC3	100	92.624	Propithecus_coquereli
ENSCAFG00020018882	CASC3	100	95.870	ENSPVAG00000008556	CASC3	100	95.597	Pteropus_vampyrus
ENSCAFG00020018882	CASC3	81	54.517	ENSPNYG00000011962	casc3	80	54.455	Pundamilia_nyererei
ENSCAFG00020018882	CASC3	91	52.645	ENSPNAG00000015928	casc3	79	57.792	Pygocentrus_nattereri
ENSCAFG00020018882	CASC3	100	92.056	ENSRNOG00000009716	Casc3	100	91.749	Rattus_norvegicus
ENSCAFG00020018882	CASC3	100	94.894	ENSRBIG00000033289	CASC3	100	94.752	Rhinopithecus_bieti
ENSCAFG00020018882	CASC3	100	94.894	ENSRROG00000022337	CASC3	100	94.894	Rhinopithecus_roxellana
ENSCAFG00020018882	CASC3	86	95.833	ENSSBOG00000031406	CASC3	98	94.337	Saimiri_boliviensis_boliviensis
ENSCAFG00020018882	CASC3	88	87.202	ENSSHAG00000013338	CASC3	100	83.438	Sarcophilus_harrisii
ENSCAFG00020018882	CASC3	90	61.199	ENSSFOG00015002645	casc3	70	59.295	Scleropages_formosus
ENSCAFG00020018882	CASC3	75	67.361	ENSSMAG00000016096	casc3	56	61.728	Scophthalmus_maximus
ENSCAFG00020018882	CASC3	83	51.190	ENSSDUG00000016893	casc3	68	52.778	Seriola_dumerili
ENSCAFG00020018882	CASC3	88	48.252	ENSSLDG00000020308	casc3	90	48.785	Seriola_lalandi_dorsalis
ENSCAFG00020018882	CASC3	83	91.445	ENSSARG00000010378	CASC3	98	82.997	Sorex_araneus
ENSCAFG00020018882	CASC3	80	52.427	ENSSPAG00000023008	casc3	77	51.815	Stegastes_partitus
ENSCAFG00020018882	CASC3	88	94.976	ENSSSCG00000017477	CASC3	97	94.976	Sus_scrofa
ENSCAFG00020018882	CASC3	74	74.905	ENSTGUG00000002300	CASC3	99	74.095	Taeniopygia_guttata
ENSCAFG00020018882	CASC3	80	55.263	ENSTRUG00000000673	casc3	76	51.815	Takifugu_rubripes
ENSCAFG00020018882	CASC3	72	98.585	ENSTBEG00000017459	CASC3	67	98.585	Tupaia_belangeri
ENSCAFG00020018882	CASC3	84	96.460	ENSTTRG00000016896	CASC3	98	86.364	Tursiops_truncatus
ENSCAFG00020018882	CASC3	100	99.670	ENSUAMG00000015116	CASC3	100	99.672	Ursus_americanus
ENSCAFG00020018882	CASC3	88	97.407	ENSUMAG00000017697	CASC3	100	98.454	Ursus_maritimus
ENSCAFG00020018882	CASC3	75	100.000	ENSVPAG00000000799	CASC3	75	100.000	Vicugna_pacos
ENSCAFG00020018882	CASC3	100	99.115	ENSVVUG00000000997	CASC3	100	98.580	Vulpes_vulpes
ENSCAFG00020018882	CASC3	89	60.283	ENSXETG00000024395	casc3	98	57.483	Xenopus_tropicalis
ENSCAFG00020018882	CASC3	74	64.881	ENSXMAG00000013937	casc3	77	52.941	Xiphophorus_maculatus