EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020018899 (Gene tree)
Gene ID: 112642781
Gene Symbol: LARP1B
Alias: DKFZp434K245|DKFZp686E0316|FLJ10378|LARP2
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 118335 bases
Position: chrQKWQ01000159.1:7001689-7120023
Accession: 112642781
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020024116	La	PF05383.17	5e-22	1	1
ENSCAFP00020024120	La	PF05383.17	9.7e-22	1	1
ENSCAFP00020024109	La	PF05383.17	1.1e-21	1	1
ENSCAFP00020024114	La	PF05383.17	1.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020027849	LARP1B-203	1008	-	ENSCAFP00020024116	335 (aa)	XP_025276384	UPI0000EB1362
ENSCAFT00020027852	LARP1B-204	867	-	ENSCAFP00020024120	288 (aa)	-	-
ENSCAFT00020027842	LARP1B-201	2796	-	ENSCAFP00020024109	931 (aa)	-	-
ENSCAFT00020027847	LARP1B-202	2766	-	ENSCAFP00020024114	921 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020018899's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020018899's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020018899	LARP1B	91	62.258	ENSCAFG00020023860	LARP1	96	62.030

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020018899	LARP1B	100	92.239	ENSG00000138709	LARP1B	100	92.239	Homo_sapiens
ENSCAFG00020018899	LARP1B	95	58.043	ENSAPOG00000020101	larp1b	85	57.158	Acanthochromis_polyacanthus
ENSCAFG00020018899	LARP1B	100	97.015	ENSAMEG00000002748	LARP1B	100	97.096	Ailuropoda_melanoleuca
ENSCAFG00020018899	LARP1B	99	54.784	ENSACIG00000023890	larp1b	85	54.784	Amphilophus_citrinellus
ENSCAFG00020018899	LARP1B	99	52.632	ENSAOCG00000014268	larp1b	84	57.791	Amphiprion_ocellaris
ENSCAFG00020018899	LARP1B	99	57.188	ENSAPEG00000004126	larp1b	85	57.614	Amphiprion_percula
ENSCAFG00020018899	LARP1B	97	57.143	ENSATEG00000017849	larp1b	86	56.649	Anabas_testudineus
ENSCAFG00020018899	LARP1B	94	71.500	ENSAPLG00000010129	LARP1B	98	69.901	Anas_platyrhynchos
ENSCAFG00020018899	LARP1B	98	74.924	ENSACAG00000011338	LARP1B	86	77.726	Anolis_carolinensis
ENSCAFG00020018899	LARP1B	99	80.060	ENSANAG00000034618	LARP1B	97	84.375	Aotus_nancymaae
ENSCAFG00020018899	LARP1B	95	57.473	ENSACLG00000011948	larp1b	85	55.799	Astatotilapia_calliptera
ENSCAFG00020018899	LARP1B	98	52.013	ENSAMXG00000006805	larp1b	85	53.112	Astyanax_mexicanus
ENSCAFG00020018899	LARP1B	98	93.636	ENSBTAG00000012135	LARP1B	98	91.813	Bos_taurus
ENSCAFG00020018899	LARP1B	100	92.836	ENSCJAG00000003338	LARP1B	100	92.836	Callithrix_jacchus
ENSCAFG00020018899	LARP1B	100	98.711	ENSCAFG00000003831	LARP1B	100	98.711	Canis_familiaris
ENSCAFG00020018899	LARP1B	100	93.772	ENSCHIG00000023144	LARP1B	100	93.772	Capra_hircus
ENSCAFG00020018899	LARP1B	99	88.153	ENSTSYG00000002037	-	99	88.153	Carlito_syrichta
ENSCAFG00020018899	LARP1B	76	96.429	ENSCPOG00000034668	-	93	96.429	Cavia_porcellus
ENSCAFG00020018899	LARP1B	99	93.413	ENSCCAG00000021948	LARP1B	99	93.413	Cebus_capucinus
ENSCAFG00020018899	LARP1B	100	89.254	ENSCATG00000013541	LARP1B	100	89.945	Cercocebus_atys
ENSCAFG00020018899	LARP1B	100	87.847	ENSCLAG00000006448	-	100	87.847	Chinchilla_lanigera
ENSCAFG00020018899	LARP1B	98	91.843	ENSCSAG00000003582	LARP1B	100	91.058	Chlorocebus_sabaeus
ENSCAFG00020018899	LARP1B	98	82.988	ENSCHOG00000005354	LARP1B	100	82.879	Choloepus_hoffmanni
ENSCAFG00020018899	LARP1B	99	77.361	ENSCPBG00000017480	LARP1B	87	77.790	Chrysemys_picta_bellii
ENSCAFG00020018899	LARP1B	100	93.403	ENSCANG00000026958	LARP1B	100	93.403	Colobus_angolensis_palliatus
ENSCAFG00020018899	LARP1B	100	91.667	ENSCGRG00001004660	-	100	91.667	Cricetulus_griseus_chok1gshd
ENSCAFG00020018899	LARP1B	100	91.319	ENSCGRG00000001914	-	100	91.319	Cricetulus_griseus_crigri
ENSCAFG00020018899	LARP1B	95	53.391	ENSCSEG00000013519	larp1b	86	54.943	Cynoglossus_semilaevis
ENSCAFG00020018899	LARP1B	95	57.533	ENSCVAG00000005046	larp1b	86	55.714	Cyprinodon_variegatus
ENSCAFG00020018899	LARP1B	96	55.422	ENSDARG00000061169	larp1b	79	56.579	Danio_rerio
ENSCAFG00020018899	LARP1B	98	91.489	ENSDNOG00000018765	-	99	90.980	Dasypus_novemcinctus
ENSCAFG00020018899	LARP1B	78	97.170	ENSETEG00000012497	LARP1B	89	82.353	Echinops_telfairi
ENSCAFG00020018899	LARP1B	92	51.456	ENSEBUG00000003668	larp1b	87	51.892	Eptatretus_burgeri
ENSCAFG00020018899	LARP1B	99	98.258	ENSEASG00005018106	LARP1B	99	98.258	Equus_asinus_asinus
ENSCAFG00020018899	LARP1B	98	96.657	ENSECAG00000001088	LARP1B	82	91.622	Equus_caballus
ENSCAFG00020018899	LARP1B	98	48.110	ENSELUG00000023774	larp1b	72	56.260	Esox_lucius
ENSCAFG00020018899	LARP1B	100	96.716	ENSFCAG00000014650	-	100	96.716	Felis_catus
ENSCAFG00020018899	LARP1B	100	68.763	ENSFALG00000008098	LARP1B	100	68.763	Ficedula_albicollis
ENSCAFG00020018899	LARP1B	99	56.592	ENSFHEG00000010264	larp1b	82	56.445	Fundulus_heteroclitus
ENSCAFG00020018899	LARP1B	75	67.910	ENSGMOG00000005207	larp1b	62	67.347	Gadus_morhua
ENSCAFG00020018899	LARP1B	100	68.187	ENSGALG00000010207	LARP1B	87	70.440	Gallus_gallus
ENSCAFG00020018899	LARP1B	90	60.282	ENSGAFG00000012012	larp1b	98	59.147	Gambusia_affinis
ENSCAFG00020018899	LARP1B	99	51.235	ENSGACG00000004609	larp1b	85	54.012	Gasterosteus_aculeatus
ENSCAFG00020018899	LARP1B	100	77.457	ENSGAGG00000017209	LARP1B	87	77.885	Gopherus_agassizii
ENSCAFG00020018899	LARP1B	100	92.239	ENSGGOG00000015900	LARP1B	100	92.239	Gorilla_gorilla
ENSCAFG00020018899	LARP1B	95	57.599	ENSHBUG00000009730	larp1b	85	55.916	Haplochromis_burtoni
ENSCAFG00020018899	LARP1B	98	74.164	ENSHGLG00000013922	-	97	74.242	Heterocephalus_glaber_female
ENSCAFG00020018899	LARP1B	100	85.959	ENSHGLG00000006728	-	99	86.301	Heterocephalus_glaber_female
ENSCAFG00020018899	LARP1B	100	86.806	ENSHGLG00100014041	-	99	83.573	Heterocephalus_glaber_male
ENSCAFG00020018899	LARP1B	98	74.164	ENSHGLG00100016491	-	97	74.242	Heterocephalus_glaber_male
ENSCAFG00020018899	LARP1B	74	61.416	ENSHCOG00000000918	larp1b	96	62.139	Hippocampus_comes
ENSCAFG00020018899	LARP1B	98	54.027	ENSIPUG00000012138	larp1b	81	56.564	Ictalurus_punctatus
ENSCAFG00020018899	LARP1B	90	77.992	ENSSTOG00000033183	-	100	77.992	Ictidomys_tridecemlineatus
ENSCAFG00020018899	LARP1B	100	90.476	ENSSTOG00000008596	-	100	90.476	Ictidomys_tridecemlineatus
ENSCAFG00020018899	LARP1B	96	75.078	ENSSTOG00000034510	-	87	75.078	Ictidomys_tridecemlineatus
ENSCAFG00020018899	LARP1B	99	82.175	ENSSTOG00000021917	-	94	82.477	Ictidomys_tridecemlineatus
ENSCAFG00020018899	LARP1B	99	89.199	ENSJJAG00000022360	Larp1b	99	89.199	Jaculus_jaculus
ENSCAFG00020018899	LARP1B	94	55.973	ENSKMAG00000011589	larp1b	85	56.910	Kryptolebias_marmoratus
ENSCAFG00020018899	LARP1B	95	57.593	ENSLBEG00000005655	larp1b	85	56.408	Labrus_bergylta
ENSCAFG00020018899	LARP1B	98	73.252	ENSLACG00000015247	LARP1B	100	70.738	Latimeria_chalumnae
ENSCAFG00020018899	LARP1B	99	64.161	ENSLOCG00000010684	larp1b	94	66.012	Lepisosteus_oculatus
ENSCAFG00020018899	LARP1B	99	93.750	ENSLAFG00000008473	-	99	93.750	Loxodonta_africana
ENSCAFG00020018899	LARP1B	100	92.836	ENSMFAG00000002218	LARP1B	100	92.836	Macaca_fascicularis
ENSCAFG00020018899	LARP1B	100	66.667	ENSMFAG00000003306	-	93	90.345	Macaca_fascicularis
ENSCAFG00020018899	LARP1B	100	92.836	ENSMMUG00000021347	LARP1B	100	92.836	Macaca_mulatta
ENSCAFG00020018899	LARP1B	65	90.909	ENSMNEG00000027747	-	89	90.909	Macaca_nemestrina
ENSCAFG00020018899	LARP1B	90	88.719	ENSMNEG00000030406	LARP1B	100	88.719	Macaca_nemestrina
ENSCAFG00020018899	LARP1B	98	87.432	ENSMLEG00000009306	LARP1B	100	87.541	Mandrillus_leucophaeus
ENSCAFG00020018899	LARP1B	99	57.158	ENSMAMG00000000081	larp1b	87	57.278	Mastacembelus_armatus
ENSCAFG00020018899	LARP1B	75	63.558	ENSMZEG00005002545	larp1b	98	60.506	Maylandia_zebra
ENSCAFG00020018899	LARP1B	93	64.182	ENSMGAG00000004809	LARP1B	98	64.660	Meleagris_gallopavo
ENSCAFG00020018899	LARP1B	100	90.625	ENSMAUG00000007879	-	100	90.625	Mesocricetus_auratus
ENSCAFG00020018899	LARP1B	100	95.522	ENSMICG00000036111	LARP1B	100	95.522	Microcebus_murinus
ENSCAFG00020018899	LARP1B	98	85.315	ENSMICG00000037883	-	88	85.315	Microcebus_murinus
ENSCAFG00020018899	LARP1B	97	69.632	ENSMICG00000028052	-	99	69.960	Microcebus_murinus
ENSCAFG00020018899	LARP1B	79	93.916	ENSMOCG00000001490	Larp1b	95	93.916	Microtus_ochrogaster
ENSCAFG00020018899	LARP1B	100	86.247	ENSMODG00000012300	LARP1B	83	86.966	Monodelphis_domestica
ENSCAFG00020018899	LARP1B	98	56.992	ENSMALG00000003638	larp1b	87	57.219	Monopterus_albus
ENSCAFG00020018899	LARP1B	100	89.583	MGP_CAROLIEiJ_G0024962	Larp1b	100	89.583	Mus_caroli
ENSCAFG00020018899	LARP1B	100	90.972	ENSMUSG00000025762	Larp1b	100	90.972	Mus_musculus
ENSCAFG00020018899	LARP1B	100	90.278	MGP_PahariEiJ_G0026403	Larp1b	100	90.278	Mus_pahari
ENSCAFG00020018899	LARP1B	100	90.972	MGP_SPRETEiJ_G0025897	Larp1b	100	90.972	Mus_spretus
ENSCAFG00020018899	LARP1B	98	98.480	ENSMPUG00000017365	LARP1B	83	95.166	Mustela_putorius_furo
ENSCAFG00020018899	LARP1B	98	96.667	ENSMLUG00000010229	LARP1B	97	85.291	Myotis_lucifugus
ENSCAFG00020018899	LARP1B	74	59.012	ENSNBRG00000023846	larp1b	83	54.722	Neolamprologus_brichardi
ENSCAFG00020018899	LARP1B	100	91.940	ENSNLEG00000013819	LARP1B	100	91.940	Nomascus_leucogenys
ENSCAFG00020018899	LARP1B	85	82.081	ENSMEUG00000010308	LARP1B	88	82.081	Notamacropus_eugenii
ENSCAFG00020018899	LARP1B	98	75.380	ENSOPRG00000005478	LARP1B	100	72.113	Ochotona_princeps
ENSCAFG00020018899	LARP1B	100	87.847	ENSODEG00000001292	-	100	87.847	Octodon_degus
ENSCAFG00020018899	LARP1B	95	56.663	ENSONIG00000012386	larp1b	93	56.865	Oreochromis_niloticus
ENSCAFG00020018899	LARP1B	98	94.529	ENSOCUG00000013330	LARP1B	100	89.903	Oryctolagus_cuniculus
ENSCAFG00020018899	LARP1B	95	57.065	ENSORLG00000017954	larp1b	84	56.296	Oryzias_latipes
ENSCAFG00020018899	LARP1B	99	55.873	ENSORLG00020013081	larp1b	84	56.250	Oryzias_latipes_hni
ENSCAFG00020018899	LARP1B	99	57.006	ENSORLG00015009580	larp1b	84	57.006	Oryzias_latipes_hsok
ENSCAFG00020018899	LARP1B	96	57.363	ENSOMEG00000004210	larp1b	84	56.702	Oryzias_melastigma
ENSCAFG00020018899	LARP1B	98	91.212	ENSOGAG00000005771	LARP1B	98	90.356	Otolemur_garnettii
ENSCAFG00020018899	LARP1B	98	93.333	ENSOARG00000015300	LARP1B	100	91.048	Ovis_aries
ENSCAFG00020018899	LARP1B	100	91.940	ENSPPAG00000030439	LARP1B	100	91.940	Pan_paniscus
ENSCAFG00020018899	LARP1B	100	96.716	ENSPPRG00000002743	-	100	96.716	Panthera_pardus
ENSCAFG00020018899	LARP1B	100	96.716	ENSPTIG00000011225	LARP1B	100	96.716	Panthera_tigris_altaica
ENSCAFG00020018899	LARP1B	100	91.642	ENSPTRG00000016437	LARP1B	100	91.642	Pan_troglodytes
ENSCAFG00020018899	LARP1B	100	92.537	ENSPANG00000012488	LARP1B	100	92.537	Papio_anubis
ENSCAFG00020018899	LARP1B	97	54.196	ENSPKIG00000014360	larp1b	90	51.552	Paramormyrops_kingsleyae
ENSCAFG00020018899	LARP1B	98	76.133	ENSPSIG00000012885	LARP1B	93	79.636	Pelodiscus_sinensis
ENSCAFG00020018899	LARP1B	78	61.464	ENSPMGG00000007207	larp1b	91	60.742	Periophthalmus_magnuspinnatus
ENSCAFG00020018899	LARP1B	92	50.658	ENSPMAG00000002700	larp1b	97	53.376	Petromyzon_marinus
ENSCAFG00020018899	LARP1B	100	85.225	ENSPCIG00000026516	LARP1B	100	86.701	Phascolarctos_cinereus
ENSCAFG00020018899	LARP1B	97	50.986	ENSPFOG00000022837	-	78	52.564	Poecilia_formosa
ENSCAFG00020018899	LARP1B	99	56.584	ENSPFOG00000019519	larp1b	86	55.859	Poecilia_formosa
ENSCAFG00020018899	LARP1B	100	57.321	ENSPLAG00000007115	larp1b	86	57.321	Poecilia_latipinna
ENSCAFG00020018899	LARP1B	99	57.656	ENSPMEG00000001224	larp1b	86	56.995	Poecilia_mexicana
ENSCAFG00020018899	LARP1B	71	66.184	ENSPREG00000005955	-	89	55.986	Poecilia_reticulata
ENSCAFG00020018899	LARP1B	98	89.058	ENSPCAG00000007546	LARP1B	100	86.681	Procavia_capensis
ENSCAFG00020018899	LARP1B	100	94.627	ENSPCOG00000021874	LARP1B	100	94.627	Propithecus_coquereli
ENSCAFG00020018899	LARP1B	98	87.538	ENSPVAG00000005373	LARP1B	100	86.026	Pteropus_vampyrus
ENSCAFG00020018899	LARP1B	75	63.128	ENSPNYG00000017357	larp1b	98	59.500	Pundamilia_nyererei
ENSCAFG00020018899	LARP1B	97	53.041	ENSPNAG00000008823	larp1b	83	55.520	Pygocentrus_nattereri
ENSCAFG00020018899	LARP1B	100	91.642	ENSRNOG00000038366	Larp1b	100	91.642	Rattus_norvegicus
ENSCAFG00020018899	LARP1B	100	90.746	ENSRBIG00000039982	-	100	90.746	Rhinopithecus_bieti
ENSCAFG00020018899	LARP1B	100	82.985	ENSRBIG00000038568	-	92	82.985	Rhinopithecus_bieti
ENSCAFG00020018899	LARP1B	100	84.429	ENSRROG00000038525	-	96	84.429	Rhinopithecus_roxellana
ENSCAFG00020018899	LARP1B	100	92.836	ENSRROG00000030771	LARP1B	100	92.836	Rhinopithecus_roxellana
ENSCAFG00020018899	LARP1B	98	88.788	ENSSHAG00000014474	LARP1B	99	86.357	Sarcophilus_harrisii
ENSCAFG00020018899	LARP1B	95	56.736	ENSSMAG00000006347	larp1b	93	55.438	Scophthalmus_maximus
ENSCAFG00020018899	LARP1B	95	58.589	ENSSDUG00000004182	larp1b	85	56.289	Seriola_dumerili
ENSCAFG00020018899	LARP1B	97	46.429	ENSSLDG00000014613	larp1b	70	60.972	Seriola_lalandi_dorsalis
ENSCAFG00020018899	LARP1B	98	73.414	ENSSPUG00000011837	LARP1B	99	69.205	Sphenodon_punctatus
ENSCAFG00020018899	LARP1B	95	58.124	ENSSPAG00000017772	larp1b	86	56.269	Stegastes_partitus
ENSCAFG00020018899	LARP1B	98	94.529	ENSSSCG00000034280	LARP1B	99	94.845	Sus_scrofa
ENSCAFG00020018899	LARP1B	99	56.794	ENSSSCG00000040491	-	99	73.529	Sus_scrofa
ENSCAFG00020018899	LARP1B	93	69.403	ENSTGUG00000002098	-	99	65.461	Taeniopygia_guttata
ENSCAFG00020018899	LARP1B	96	54.955	ENSTRUG00000005612	larp1b	82	56.670	Takifugu_rubripes
ENSCAFG00020018899	LARP1B	98	53.710	ENSTNIG00000012398	larp1b	94	55.330	Tetraodon_nigroviridis
ENSCAFG00020018899	LARP1B	85	87.619	ENSTBEG00000004177	LARP1B	88	87.619	Tupaia_belangeri
ENSCAFG00020018899	LARP1B	98	82.007	ENSTTRG00000012984	LARP1B	100	82.007	Tursiops_truncatus
ENSCAFG00020018899	LARP1B	100	86.269	ENSUAMG00000016938	-	91	98.817	Ursus_americanus
ENSCAFG00020018899	LARP1B	100	94.844	ENSUMAG00000007373	LARP1B	100	94.844	Ursus_maritimus
ENSCAFG00020018899	LARP1B	98	80.748	ENSVPAG00000007223	LARP1B	100	80.748	Vicugna_pacos
ENSCAFG00020018899	LARP1B	100	98.389	ENSVVUG00000011307	LARP1B	99	99.411	Vulpes_vulpes
ENSCAFG00020018899	LARP1B	99	60.430	ENSXETG00000022512	larp1b	89	60.430	Xenopus_tropicalis
ENSCAFG00020018899	LARP1B	72	61.976	ENSXCOG00000004435	larp1b	73	59.915	Xiphophorus_couchianus
ENSCAFG00020018899	LARP1B	95	58.215	ENSXMAG00000008150	larp1b	85	56.920	Xiphophorus_maculatus