EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020018943 (Gene tree)
Gene ID: 112666335
Gene Symbol: SAFB
Alias: HET|SAFB1
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 34992 bases
Position: chrQKWQ01000751.1:3896527-3931518
Accession: 112666335
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020024067	RRM_5	PF13893.6	4.6e-07	1	1
ENSCAFP00020024067	RRM_1	PF00076.22	3.9e-13	1	1
ENSCAFP00020024067	SAP	PF02037.27	9.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020027797	SAFB-201	3088	XM_025457096	ENSCAFP00020024067	916 (aa)	XP_025312881	UPI0002256998

Gene Model

Click here to download ENSCAFG00020018943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020018943's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020018943	SAFB	100	66.735	ENSCAFG00020018939	SAFB2	94	71.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020018943	SAFB	100	93.457	ENSG00000160633	SAFB	100	93.457	Homo_sapiens
ENSCAFG00020018943	SAFB	90	44.879	ENSAPOG00000022508	safb	66	43.598	Acanthochromis_polyacanthus
ENSCAFG00020018943	SAFB	100	97.500	ENSAMEG00000012254	SAFB	100	97.500	Ailuropoda_melanoleuca
ENSCAFG00020018943	SAFB	97	39.430	ENSACIG00000006247	safb	73	42.743	Amphilophus_citrinellus
ENSCAFG00020018943	SAFB	92	43.938	ENSAOCG00000006308	safb	71	43.577	Amphiprion_ocellaris
ENSCAFG00020018943	SAFB	90	44.610	ENSAPEG00000023342	safb	66	43.042	Amphiprion_percula
ENSCAFG00020018943	SAFB	95	42.140	ENSATEG00000004998	safb	66	42.904	Anabas_testudineus
ENSCAFG00020018943	SAFB	89	63.734	ENSAPLG00000006355	-	99	63.886	Anas_platyrhynchos
ENSCAFG00020018943	SAFB	93	66.359	ENSAPLG00000005780	-	100	64.245	Anas_platyrhynchos
ENSCAFG00020018943	SAFB	100	93.246	ENSANAG00000028821	SAFB	100	93.246	Aotus_nancymaae
ENSCAFG00020018943	SAFB	90	42.303	ENSACLG00000001926	safb	65	42.484	Astatotilapia_calliptera
ENSCAFG00020018943	SAFB	91	44.767	ENSAMXG00000018154	safb	65	42.693	Astyanax_mexicanus
ENSCAFG00020018943	SAFB	100	91.285	ENSBTAG00000007875	SAFB	100	91.285	Bos_taurus
ENSCAFG00020018943	SAFB	83	96.226	ENSCJAG00000017081	SAFB	100	96.226	Callithrix_jacchus
ENSCAFG00020018943	SAFB	100	100.000	ENSCAFG00000018803	SAFB	87	100.000	Canis_familiaris
ENSCAFG00020018943	SAFB	100	89.869	ENSCHIG00000007262	SAFB	98	92.925	Capra_hircus
ENSCAFG00020018943	SAFB	58	78.987	ENSTSYG00000001851	-	100	75.735	Carlito_syrichta
ENSCAFG00020018943	SAFB	100	88.110	ENSCPOG00000026322	SAFB	100	88.004	Cavia_porcellus
ENSCAFG00020018943	SAFB	100	93.362	ENSCCAG00000020193	SAFB	100	93.362	Cebus_capucinus
ENSCAFG00020018943	SAFB	100	93.682	ENSCATG00000029994	SAFB	100	93.682	Cercocebus_atys
ENSCAFG00020018943	SAFB	100	88.687	ENSCLAG00000007734	SAFB	100	89.434	Chinchilla_lanigera
ENSCAFG00020018943	SAFB	100	93.682	ENSCSAG00000009949	SAFB	100	93.682	Chlorocebus_sabaeus
ENSCAFG00020018943	SAFB	86	92.857	ENSCHOG00000003208	SAFB	93	92.857	Choloepus_hoffmanni
ENSCAFG00020018943	SAFB	91	65.325	ENSCPBG00000010928	-	99	63.626	Chrysemys_picta_bellii
ENSCAFG00020018943	SAFB	91	61.808	ENSCPBG00000010936	-	99	61.695	Chrysemys_picta_bellii
ENSCAFG00020018943	SAFB	100	87.664	ENSCANG00000019754	-	100	87.664	Colobus_angolensis_palliatus
ENSCAFG00020018943	SAFB	95	94.527	ENSCANG00000004774	-	100	94.527	Colobus_angolensis_palliatus
ENSCAFG00020018943	SAFB	100	84.632	ENSCGRG00001002254	Safb	100	84.632	Cricetulus_griseus_chok1gshd
ENSCAFG00020018943	SAFB	90	81.443	ENSCGRG00000011529	Safb	96	81.443	Cricetulus_griseus_crigri
ENSCAFG00020018943	SAFB	96	41.383	ENSCSEG00000019870	safb	69	40.584	Cynoglossus_semilaevis
ENSCAFG00020018943	SAFB	94	39.887	ENSCVAG00000002226	safb	65	40.589	Cyprinodon_variegatus
ENSCAFG00020018943	SAFB	89	41.947	ENSDARG00000020467	safb	60	60.000	Danio_rerio
ENSCAFG00020018943	SAFB	100	92.492	ENSDNOG00000015746	SAFB	95	92.683	Dasypus_novemcinctus
ENSCAFG00020018943	SAFB	100	83.015	ENSDORG00000016200	Safb	100	83.051	Dipodomys_ordii
ENSCAFG00020018943	SAFB	80	86.232	ENSETEG00000018679	SAFB	76	86.752	Echinops_telfairi
ENSCAFG00020018943	SAFB	100	90.466	ENSEASG00005023019	SAFB	100	91.008	Equus_asinus_asinus
ENSCAFG00020018943	SAFB	100	92.803	ENSECAG00000018659	SAFB	89	92.803	Equus_caballus
ENSCAFG00020018943	SAFB	97	41.702	ENSELUG00000022327	safb	59	55.714	Esox_lucius
ENSCAFG00020018943	SAFB	100	98.366	ENSFCAG00000011835	SAFB	100	98.366	Felis_catus
ENSCAFG00020018943	SAFB	100	66.129	ENSFALG00000013882	-	89	64.667	Ficedula_albicollis
ENSCAFG00020018943	SAFB	91	60.476	ENSFALG00000013881	-	99	60.879	Ficedula_albicollis
ENSCAFG00020018943	SAFB	100	69.914	ENSFDAG00000020306	SAFB	100	87.270	Fukomys_damarensis
ENSCAFG00020018943	SAFB	59	46.726	ENSGMOG00000014280	safb	65	40.000	Gadus_morhua
ENSCAFG00020018943	SAFB	100	65.770	ENSGALG00000013365	-	97	65.628	Gallus_gallus
ENSCAFG00020018943	SAFB	100	61.427	ENSGALG00000001948	-	97	63.298	Gallus_gallus
ENSCAFG00020018943	SAFB	97	41.870	ENSGACG00000011385	safb	67	42.332	Gasterosteus_aculeatus
ENSCAFG00020018943	SAFB	95	63.147	ENSGAGG00000008424	-	97	63.515	Gopherus_agassizii
ENSCAFG00020018943	SAFB	72	60.534	ENSGAGG00000017702	-	100	57.965	Gopherus_agassizii
ENSCAFG00020018943	SAFB	100	93.137	ENSGGOG00000015109	SAFB	100	93.137	Gorilla_gorilla
ENSCAFG00020018943	SAFB	97	38.785	ENSHBUG00000009218	safb	71	40.931	Haplochromis_burtoni
ENSCAFG00020018943	SAFB	100	91.309	ENSHGLG00000015883	SAFB	100	91.309	Heterocephalus_glaber_female
ENSCAFG00020018943	SAFB	100	75.774	ENSHGLG00100004228	SAFB	77	89.555	Heterocephalus_glaber_male
ENSCAFG00020018943	SAFB	91	37.514	ENSHCOG00000001705	safb	67	37.050	Hippocampus_comes
ENSCAFG00020018943	SAFB	93	92.281	ENSSTOG00000002783	SAFB	100	92.281	Ictidomys_tridecemlineatus
ENSCAFG00020018943	SAFB	100	86.079	ENSJJAG00000009021	Safb	100	85.441	Jaculus_jaculus
ENSCAFG00020018943	SAFB	90	42.857	ENSKMAG00000022308	safb	66	40.422	Kryptolebias_marmoratus
ENSCAFG00020018943	SAFB	97	42.246	ENSLBEG00000006015	safb	65	45.146	Labrus_bergylta
ENSCAFG00020018943	SAFB	64	53.160	ENSLACG00000018090	SAFB	99	54.536	Latimeria_chalumnae
ENSCAFG00020018943	SAFB	97	46.788	ENSLOCG00000003613	safb	76	46.003	Lepisosteus_oculatus
ENSCAFG00020018943	SAFB	99	91.186	ENSLAFG00000003840	SAFB	100	89.989	Loxodonta_africana
ENSCAFG00020018943	SAFB	100	93.580	ENSMFAG00000003885	SAFB	100	93.580	Macaca_fascicularis
ENSCAFG00020018943	SAFB	100	93.682	ENSMMUG00000017970	SAFB	100	93.682	Macaca_mulatta
ENSCAFG00020018943	SAFB	100	90.098	ENSMNEG00000035637	SAFB	100	90.098	Macaca_nemestrina
ENSCAFG00020018943	SAFB	100	87.961	ENSMLEG00000038637	SAFB	100	87.961	Mandrillus_leucophaeus
ENSCAFG00020018943	SAFB	95	41.514	ENSMAMG00000003357	safb	61	42.122	Mastacembelus_armatus
ENSCAFG00020018943	SAFB	95	41.540	ENSMZEG00005009120	safb	67	42.925	Maylandia_zebra
ENSCAFG00020018943	SAFB	89	60.096	ENSMGAG00000001051	-	97	60.000	Meleagris_gallopavo
ENSCAFG00020018943	SAFB	97	64.103	ENSMGAG00000001101	-	100	62.388	Meleagris_gallopavo
ENSCAFG00020018943	SAFB	53	90.965	ENSMAUG00000005013	Safb	100	90.965	Mesocricetus_auratus
ENSCAFG00020018943	SAFB	100	89.771	ENSMICG00000008739	-	100	89.010	Microcebus_murinus
ENSCAFG00020018943	SAFB	85	79.001	ENSMICG00000046795	-	98	92.553	Microcebus_murinus
ENSCAFG00020018943	SAFB	100	84.558	ENSMOCG00000014040	Safb	100	84.558	Microtus_ochrogaster
ENSCAFG00020018943	SAFB	100	75.186	ENSMODG00000001236	SAFB	98	75.873	Monodelphis_domestica
ENSCAFG00020018943	SAFB	93	40.919	ENSMALG00000020330	safb	70	41.297	Monopterus_albus
ENSCAFG00020018943	SAFB	100	84.861	MGP_CAROLIEiJ_G0021780	Safb	100	84.861	Mus_caroli
ENSCAFG00020018943	SAFB	100	84.968	ENSMUSG00000071054	Safb	100	84.968	Mus_musculus
ENSCAFG00020018943	SAFB	100	84.665	MGP_PahariEiJ_G0020769	Safb	100	84.665	Mus_pahari
ENSCAFG00020018943	SAFB	100	97.930	ENSMPUG00000006123	SAFB	94	97.930	Mustela_putorius_furo
ENSCAFG00020018943	SAFB	100	94.444	ENSMLUG00000001081	SAFB	100	94.444	Myotis_lucifugus
ENSCAFG00020018943	SAFB	100	81.847	ENSNGAG00000019882	Safb	100	81.529	Nannospalax_galili
ENSCAFG00020018943	SAFB	96	93.636	ENSNLEG00000013551	SAFB	100	93.636	Nomascus_leucogenys
ENSCAFG00020018943	SAFB	88	84.256	ENSOPRG00000011561	-	100	85.732	Ochotona_princeps
ENSCAFG00020018943	SAFB	100	91.142	ENSODEG00000014838	SAFB	100	91.142	Octodon_degus
ENSCAFG00020018943	SAFB	95	41.676	ENSONIG00000002318	safb	67	42.857	Oreochromis_niloticus
ENSCAFG00020018943	SAFB	90	81.130	ENSOCUG00000014628	SAFB	65	85.261	Oryctolagus_cuniculus
ENSCAFG00020018943	SAFB	90	43.057	ENSORLG00000016989	safb	66	40.968	Oryzias_latipes
ENSCAFG00020018943	SAFB	94	40.506	ENSORLG00020000404	safb	68	39.374	Oryzias_latipes_hni
ENSCAFG00020018943	SAFB	94	42.667	ENSORLG00015010733	safb	67	41.290	Oryzias_latipes_hsok
ENSCAFG00020018943	SAFB	100	88.274	ENSOGAG00000027769	SAFB	100	87.757	Otolemur_garnettii
ENSCAFG00020018943	SAFB	78	84.615	ENSOARG00000007856	-	100	84.336	Ovis_aries
ENSCAFG00020018943	SAFB	100	87.364	ENSOARG00000007662	-	100	85.294	Ovis_aries
ENSCAFG00020018943	SAFB	100	93.145	ENSPPAG00000035129	SAFB	100	93.145	Pan_paniscus
ENSCAFG00020018943	SAFB	100	98.366	ENSPPRG00000017197	SAFB	100	98.366	Panthera_pardus
ENSCAFG00020018943	SAFB	100	93.145	ENSPTRG00000010335	SAFB	100	93.145	Pan_troglodytes
ENSCAFG00020018943	SAFB	100	93.471	ENSPANG00000007770	SAFB	100	93.471	Papio_anubis
ENSCAFG00020018943	SAFB	95	42.366	ENSPKIG00000009902	safb	87	42.174	Paramormyrops_kingsleyae
ENSCAFG00020018943	SAFB	99	62.526	ENSPSIG00000009367	-	64	61.020	Pelodiscus_sinensis
ENSCAFG00020018943	SAFB	100	62.632	ENSPSIG00000011679	-	100	63.585	Pelodiscus_sinensis
ENSCAFG00020018943	SAFB	100	84.845	ENSPEMG00000020428	Safb	100	84.845	Peromyscus_maniculatus_bairdii
ENSCAFG00020018943	SAFB	58	81.146	ENSPCIG00000009504	-	100	80.407	Phascolarctos_cinereus
ENSCAFG00020018943	SAFB	94	39.322	ENSPFOG00000007745	safb	74	40.484	Poecilia_formosa
ENSCAFG00020018943	SAFB	94	38.677	ENSPLAG00000001614	safb	68	39.550	Poecilia_latipinna
ENSCAFG00020018943	SAFB	94	39.209	ENSPMEG00000021023	safb	70	40.262	Poecilia_mexicana
ENSCAFG00020018943	SAFB	100	93.777	ENSPPYG00000009428	SAFB	100	93.777	Pongo_abelii
ENSCAFG00020018943	SAFB	100	86.971	ENSPCAG00000006475	SAFB	100	87.405	Procavia_capensis
ENSCAFG00020018943	SAFB	100	85.575	ENSPCOG00000014090	SAFB	100	83.025	Propithecus_coquereli
ENSCAFG00020018943	SAFB	100	86.805	ENSPVAG00000004913	SAFB	100	87.241	Pteropus_vampyrus
ENSCAFG00020018943	SAFB	93	44.199	ENSPNAG00000021838	safb	66	44.108	Pygocentrus_nattereri
ENSCAFG00020018943	SAFB	100	84.272	ENSRNOG00000050543	Safb	100	84.910	Rattus_norvegicus
ENSCAFG00020018943	SAFB	100	80.807	ENSRBIG00000042509	SAFB	88	96.774	Rhinopithecus_bieti
ENSCAFG00020018943	SAFB	100	93.580	ENSRROG00000029278	SAFB	100	93.580	Rhinopithecus_roxellana
ENSCAFG00020018943	SAFB	100	93.464	ENSSBOG00000026291	SAFB	100	93.464	Saimiri_boliviensis_boliviensis
ENSCAFG00020018943	SAFB	95	44.313	ENSSFOG00015008156	safb	67	45.984	Scleropages_formosus
ENSCAFG00020018943	SAFB	97	39.915	ENSSMAG00000009316	safb	66	42.013	Scophthalmus_maximus
ENSCAFG00020018943	SAFB	97	42.641	ENSSDUG00000009652	safb	72	42.584	Seriola_dumerili
ENSCAFG00020018943	SAFB	97	42.796	ENSSLDG00000001670	safb	66	41.946	Seriola_lalandi_dorsalis
ENSCAFG00020018943	SAFB	93	87.368	ENSSARG00000010475	SAFB	100	87.836	Sorex_araneus
ENSCAFG00020018943	SAFB	57	58.333	ENSSPUG00000009747	-	99	58.809	Sphenodon_punctatus
ENSCAFG00020018943	SAFB	93	41.371	ENSSPAG00000015682	safb	70	40.909	Stegastes_partitus
ENSCAFG00020018943	SAFB	100	95.577	ENSSSCG00000013522	SAFB	99	96.272	Sus_scrofa
ENSCAFG00020018943	SAFB	96	65.398	ENSTGUG00000000502	-	97	65.167	Taeniopygia_guttata
ENSCAFG00020018943	SAFB	93	62.132	ENSTGUG00000000489	-	97	65.416	Taeniopygia_guttata
ENSCAFG00020018943	SAFB	91	40.575	ENSTRUG00000003567	safb	66	40.354	Takifugu_rubripes
ENSCAFG00020018943	SAFB	88	44.192	ENSTNIG00000015470	safb	76	41.139	Tetraodon_nigroviridis
ENSCAFG00020018943	SAFB	74	84.848	ENSTBEG00000013124	-	66	93.846	Tupaia_belangeri
ENSCAFG00020018943	SAFB	92	98.413	ENSTTRG00000013588	SAFB	92	98.413	Tursiops_truncatus
ENSCAFG00020018943	SAFB	78	96.547	ENSUAMG00000024543	SAFB	100	91.176	Ursus_americanus
ENSCAFG00020018943	SAFB	88	96.890	ENSUMAG00000009734	SAFB	97	96.935	Ursus_maritimus
ENSCAFG00020018943	SAFB	73	100.000	ENSVPAG00000012043	SAFB	79	100.000	Vicugna_pacos
ENSCAFG00020018943	SAFB	100	99.564	ENSVVUG00000013720	SAFB	87	99.564	Vulpes_vulpes
ENSCAFG00020018943	SAFB	66	50.741	ENSXETG00000008755	safb	97	52.934	Xenopus_tropicalis
ENSCAFG00020018943	SAFB	81	45.399	ENSXMAG00000003458	safb	53	51.071	Xiphophorus_maculatus