EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020018953 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 1931 bases
Position: chrQKWQ01001746.1:19793478-19795408
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020024086	RtcB	PF01139.17	5.6e-119	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020027816	-	1931	-	ENSCAFP00020024086	441 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020018953's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020018953's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020018953	-	99	96.364	ENSCAFG00020004890	-	87	96.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020018953	-	99	96.136	ENSG00000100220	RTCB	87	96.136	Homo_sapiens
ENSCAFG00020018953	-	99	90.909	ENSAPOG00000006040	rtcb	87	90.909	Acanthochromis_polyacanthus
ENSCAFG00020018953	-	99	96.364	ENSAMEG00000016152	RTCB	87	96.364	Ailuropoda_melanoleuca
ENSCAFG00020018953	-	99	86.136	ENSACIG00000009083	rtcb	87	85.682	Amphilophus_citrinellus
ENSCAFG00020018953	-	99	90.909	ENSAOCG00000005662	rtcb	87	90.909	Amphiprion_ocellaris
ENSCAFG00020018953	-	99	90.909	ENSAPEG00000024701	rtcb	87	90.909	Amphiprion_percula
ENSCAFG00020018953	-	95	89.336	ENSAPEG00000024653	rtcb	89	89.336	Amphiprion_percula
ENSCAFG00020018953	-	99	90.455	ENSATEG00000000618	rtcb	87	90.455	Anabas_testudineus
ENSCAFG00020018953	-	99	89.648	ENSACAG00000014817	RTCB	87	89.648	Anolis_carolinensis
ENSCAFG00020018953	-	99	80.866	ENSANAG00000018191	-	79	80.866	Aotus_nancymaae
ENSCAFG00020018953	-	75	82.121	ENSANAG00000023724	-	75	82.121	Aotus_nancymaae
ENSCAFG00020018953	-	99	89.091	ENSACLG00000008367	rtcb	87	89.091	Astatotilapia_calliptera
ENSCAFG00020018953	-	99	90.455	ENSAMXG00000042320	rtcb	87	90.455	Astyanax_mexicanus
ENSCAFG00020018953	-	99	95.682	ENSBTAG00000011070	RTCB	87	95.682	Bos_taurus
ENSCAFG00020018953	-	99	70.227	WBGene00008877	rtcb-1	87	70.227	Caenorhabditis_elegans
ENSCAFG00020018953	-	99	95.682	ENSCJAG00000006128	RTCB	87	95.682	Callithrix_jacchus
ENSCAFG00020018953	-	99	99.318	ENSCAFG00000010789	-	87	99.318	Canis_familiaris
ENSCAFG00020018953	-	99	96.364	ENSCAFG00000001785	RTCB	87	96.364	Canis_familiaris
ENSCAFG00020018953	-	99	95.909	ENSCHIG00000027009	-	87	95.909	Capra_hircus
ENSCAFG00020018953	-	99	95.227	ENSTSYG00000012320	RTCB	87	95.227	Carlito_syrichta
ENSCAFG00020018953	-	93	94.903	ENSCAPG00000011647	RTCB	83	94.903	Cavia_aperea
ENSCAFG00020018953	-	99	95.682	ENSCCAG00000000618	RTCB	87	95.682	Cebus_capucinus
ENSCAFG00020018953	-	99	95.682	ENSCATG00000033424	RTCB	87	95.682	Cercocebus_atys
ENSCAFG00020018953	-	99	95.455	ENSCLAG00000007997	RTCB	87	95.455	Chinchilla_lanigera
ENSCAFG00020018953	-	99	95.455	ENSCSAG00000008351	RTCB	87	95.455	Chlorocebus_sabaeus
ENSCAFG00020018953	-	99	80.000	ENSCHOG00000009123	RTCB	87	80.000	Choloepus_hoffmanni
ENSCAFG00020018953	-	99	92.500	ENSCPBG00000023184	RTCB	87	92.500	Chrysemys_picta_bellii
ENSCAFG00020018953	-	99	78.409	ENSCING00000003830	-	87	78.182	Ciona_intestinalis
ENSCAFG00020018953	-	99	78.636	ENSCSAVG00000008124	-	86	78.409	Ciona_savignyi
ENSCAFG00020018953	-	99	95.682	ENSCANG00000001891	RTCB	91	95.682	Colobus_angolensis_palliatus
ENSCAFG00020018953	-	99	95.909	ENSCGRG00001011173	Rtcb	87	95.909	Cricetulus_griseus_chok1gshd
ENSCAFG00020018953	-	92	95.320	ENSCGRG00000009587	-	83	95.320	Cricetulus_griseus_crigri
ENSCAFG00020018953	-	99	89.545	ENSCSEG00000003986	rtcb	87	89.545	Cynoglossus_semilaevis
ENSCAFG00020018953	-	85	91.733	ENSCVAG00000000569	rtcb	85	91.733	Cyprinodon_variegatus
ENSCAFG00020018953	-	99	89.773	ENSDARG00000101047	rtcb	87	89.773	Danio_rerio
ENSCAFG00020018953	-	91	94.568	ENSDNOG00000012425	RTCB	99	94.568	Dasypus_novemcinctus
ENSCAFG00020018953	-	99	95.000	ENSDORG00000010855	Rtcb	87	95.000	Dipodomys_ordii
ENSCAFG00020018953	-	99	82.192	FBgn0032781	RtcB	87	82.192	Drosophila_melanogaster
ENSCAFG00020018953	-	99	87.727	ENSETEG00000001988	RTCB	87	87.727	Echinops_telfairi
ENSCAFG00020018953	-	99	81.591	ENSEBUG00000014235	rtcb	87	81.591	Eptatretus_burgeri
ENSCAFG00020018953	-	99	95.909	ENSEASG00005019059	RTCB	87	95.909	Equus_asinus_asinus
ENSCAFG00020018953	-	99	95.909	ENSECAG00000023998	RTCB	87	95.909	Equus_caballus
ENSCAFG00020018953	-	84	95.968	ENSEEUG00000006251	RTCB	83	95.935	Erinaceus_europaeus
ENSCAFG00020018953	-	99	77.155	ENSELUG00000009275	rtcb	87	77.155	Esox_lucius
ENSCAFG00020018953	-	99	96.136	ENSFCAG00000026480	RTCB	87	96.136	Felis_catus
ENSCAFG00020018953	-	99	93.636	ENSFALG00000013334	RTCB	87	93.636	Ficedula_albicollis
ENSCAFG00020018953	-	99	95.909	ENSFDAG00000018150	RTCB	87	95.909	Fukomys_damarensis
ENSCAFG00020018953	-	99	90.227	ENSFHEG00000009595	rtcb	87	90.227	Fundulus_heteroclitus
ENSCAFG00020018953	-	99	87.727	ENSGMOG00000018882	rtcb	87	87.727	Gadus_morhua
ENSCAFG00020018953	-	99	93.409	ENSGALG00000012611	RTCB	87	93.409	Gallus_gallus
ENSCAFG00020018953	-	99	90.682	ENSGAFG00000004198	rtcb	87	90.682	Gambusia_affinis
ENSCAFG00020018953	-	99	89.773	ENSGACG00000000586	rtcb	87	89.773	Gasterosteus_aculeatus
ENSCAFG00020018953	-	99	91.818	ENSGAGG00000019133	RTCB	91	91.818	Gopherus_agassizii
ENSCAFG00020018953	-	99	96.136	ENSGGOG00000011402	RTCB	87	96.136	Gorilla_gorilla
ENSCAFG00020018953	-	99	89.091	ENSHBUG00000020571	rtcb	87	89.091	Haplochromis_burtoni
ENSCAFG00020018953	-	83	75.683	ENSHGLG00000001066	-	79	75.207	Heterocephalus_glaber_female
ENSCAFG00020018953	-	99	95.909	ENSHGLG00000004492	RTCB	87	95.909	Heterocephalus_glaber_female
ENSCAFG00020018953	-	99	95.909	ENSHGLG00100008965	RTCB	87	95.909	Heterocephalus_glaber_male
ENSCAFG00020018953	-	99	87.783	ENSHCOG00000006450	rtcb	87	87.783	Hippocampus_comes
ENSCAFG00020018953	-	99	90.000	ENSIPUG00000015443	rtcb	87	90.000	Ictalurus_punctatus
ENSCAFG00020018953	-	99	95.682	ENSSTOG00000003878	RTCB	87	95.682	Ictidomys_tridecemlineatus
ENSCAFG00020018953	-	99	95.227	ENSJJAG00000010667	Rtcb	87	95.227	Jaculus_jaculus
ENSCAFG00020018953	-	99	90.227	ENSKMAG00000013178	rtcb	87	90.227	Kryptolebias_marmoratus
ENSCAFG00020018953	-	99	90.682	ENSLBEG00000010566	RTCB	87	90.682	Labrus_bergylta
ENSCAFG00020018953	-	99	89.773	ENSLBEG00000000214	rtcb	87	89.773	Labrus_bergylta
ENSCAFG00020018953	-	99	91.591	ENSLACG00000013033	RTCB	87	91.591	Latimeria_chalumnae
ENSCAFG00020018953	-	99	90.682	ENSLOCG00000016515	rtcb	87	90.682	Lepisosteus_oculatus
ENSCAFG00020018953	-	99	95.000	ENSLAFG00000002082	RTCB	87	95.000	Loxodonta_africana
ENSCAFG00020018953	-	99	95.455	ENSMFAG00000034419	RTCB	87	95.455	Macaca_fascicularis
ENSCAFG00020018953	-	99	95.455	ENSMMUG00000006720	RTCB	87	95.455	Macaca_mulatta
ENSCAFG00020018953	-	99	95.455	ENSMNEG00000040669	RTCB	87	95.455	Macaca_nemestrina
ENSCAFG00020018953	-	99	95.682	ENSMLEG00000040505	RTCB	87	95.682	Mandrillus_leucophaeus
ENSCAFG00020018953	-	99	90.455	ENSMAMG00000020676	rtcb	87	90.455	Mastacembelus_armatus
ENSCAFG00020018953	-	99	89.091	ENSMZEG00005018942	rtcb	87	89.091	Maylandia_zebra
ENSCAFG00020018953	-	99	92.986	ENSMGAG00000012805	RTCB	87	92.986	Meleagris_gallopavo
ENSCAFG00020018953	-	54	95.213	ENSMAUG00000008301	Rtcb	78	95.213	Mesocricetus_auratus
ENSCAFG00020018953	-	99	75.227	ENSMICG00000036677	-	85	75.227	Microcebus_murinus
ENSCAFG00020018953	-	99	95.909	ENSMICG00000013303	-	87	95.909	Microcebus_murinus
ENSCAFG00020018953	-	99	95.455	ENSMOCG00000002440	Rtcb	87	95.455	Microtus_ochrogaster
ENSCAFG00020018953	-	99	90.455	ENSMMOG00000005987	rtcb	87	90.455	Mola_mola
ENSCAFG00020018953	-	99	94.318	ENSMODG00000001414	RTCB	87	94.318	Monodelphis_domestica
ENSCAFG00020018953	-	99	90.682	ENSMALG00000007603	rtcb	87	90.682	Monopterus_albus
ENSCAFG00020018953	-	99	95.455	MGP_CAROLIEiJ_G0015689	Rtcb	87	95.455	Mus_caroli
ENSCAFG00020018953	-	99	95.455	ENSMUSG00000001783	Rtcb	87	95.455	Mus_musculus
ENSCAFG00020018953	-	99	95.455	MGP_PahariEiJ_G0031396	Rtcb	87	95.455	Mus_pahari
ENSCAFG00020018953	-	99	95.455	MGP_SPRETEiJ_G0016507	Rtcb	87	95.455	Mus_spretus
ENSCAFG00020018953	-	99	96.364	ENSMPUG00000012285	RTCB	87	96.364	Mustela_putorius_furo
ENSCAFG00020018953	-	99	93.891	ENSMLUG00000007803	RTCB	87	93.891	Myotis_lucifugus
ENSCAFG00020018953	-	64	92.199	ENSNGAG00000005093	Rtcb	82	92.199	Nannospalax_galili
ENSCAFG00020018953	-	99	89.318	ENSNBRG00000017202	rtcb	87	89.318	Neolamprologus_brichardi
ENSCAFG00020018953	-	99	96.136	ENSNLEG00000004960	RTCB	87	96.136	Nomascus_leucogenys
ENSCAFG00020018953	-	99	66.136	ENSMEUG00000007809	-	75	90.566	Notamacropus_eugenii
ENSCAFG00020018953	-	75	94.529	ENSOPRG00000003488	RTCB	70	94.529	Ochotona_princeps
ENSCAFG00020018953	-	79	87.805	ENSODEG00000013033	-	83	87.805	Octodon_degus
ENSCAFG00020018953	-	98	65.358	ENSODEG00000005042	-	87	65.358	Octodon_degus
ENSCAFG00020018953	-	99	90.455	ENSONIG00000007474	rtcb	87	90.455	Oreochromis_niloticus
ENSCAFG00020018953	-	99	94.318	ENSOANG00000005524	RTCB	87	94.318	Ornithorhynchus_anatinus
ENSCAFG00020018953	-	99	95.682	ENSOCUG00000008270	RTCB	90	95.682	Oryctolagus_cuniculus
ENSCAFG00020018953	-	99	89.773	ENSORLG00000020093	rtcb	87	89.773	Oryzias_latipes
ENSCAFG00020018953	-	99	89.773	ENSORLG00020003706	rtcb	87	89.773	Oryzias_latipes_hni
ENSCAFG00020018953	-	99	90.000	ENSORLG00015002968	rtcb	87	90.000	Oryzias_latipes_hsok
ENSCAFG00020018953	-	99	89.545	ENSOMEG00000021278	rtcb	87	89.545	Oryzias_melastigma
ENSCAFG00020018953	-	99	95.682	ENSOGAG00000001425	RTCB	87	95.682	Otolemur_garnettii
ENSCAFG00020018953	-	99	95.909	ENSOARG00000018008	RTCB	87	95.909	Ovis_aries
ENSCAFG00020018953	-	99	96.136	ENSPPAG00000028667	RTCB	87	96.136	Pan_paniscus
ENSCAFG00020018953	-	99	96.136	ENSPPRG00000004038	RTCB	87	96.136	Panthera_pardus
ENSCAFG00020018953	-	93	90.488	ENSPTIG00000020499	RTCB	84	91.707	Panthera_tigris_altaica
ENSCAFG00020018953	-	99	96.136	ENSPTRG00000014287	RTCB	87	96.136	Pan_troglodytes
ENSCAFG00020018953	-	99	95.455	ENSPANG00000016035	RTCB	87	95.455	Papio_anubis
ENSCAFG00020018953	-	99	89.091	ENSPKIG00000001881	rtcb	87	89.091	Paramormyrops_kingsleyae
ENSCAFG00020018953	-	90	93.924	ENSPSIG00000011690	RTCB	86	93.924	Pelodiscus_sinensis
ENSCAFG00020018953	-	99	90.909	ENSPMGG00000016672	rtcb	87	90.909	Periophthalmus_magnuspinnatus
ENSCAFG00020018953	-	99	95.455	ENSPEMG00000019548	Rtcb	87	95.455	Peromyscus_maniculatus_bairdii
ENSCAFG00020018953	-	99	87.955	ENSPMAG00000005657	rtcb	87	87.955	Petromyzon_marinus
ENSCAFG00020018953	-	99	94.773	ENSPCIG00000009467	RTCB	87	94.773	Phascolarctos_cinereus
ENSCAFG00020018953	-	99	91.136	ENSPFOG00000003058	rtcb	87	91.136	Poecilia_formosa
ENSCAFG00020018953	-	99	90.909	ENSPLAG00000017663	rtcb	87	90.909	Poecilia_latipinna
ENSCAFG00020018953	-	99	91.136	ENSPMEG00000006227	rtcb	87	91.136	Poecilia_mexicana
ENSCAFG00020018953	-	99	90.682	ENSPREG00000018467	rtcb	87	90.682	Poecilia_reticulata
ENSCAFG00020018953	-	99	96.136	ENSPPYG00000011752	RTCB	87	96.136	Pongo_abelii
ENSCAFG00020018953	-	99	76.471	ENSPCAG00000013641	RTCB	94	76.471	Procavia_capensis
ENSCAFG00020018953	-	99	95.682	ENSPCOG00000017243	RTCB	87	95.682	Propithecus_coquereli
ENSCAFG00020018953	-	99	95.000	ENSPVAG00000002380	RTCB	94	95.000	Pteropus_vampyrus
ENSCAFG00020018953	-	99	89.091	ENSPNYG00000022760	rtcb	87	89.091	Pundamilia_nyererei
ENSCAFG00020018953	-	99	90.682	ENSPNAG00000009209	rtcb	87	90.682	Pygocentrus_nattereri
ENSCAFG00020018953	-	99	95.455	ENSRNOG00000004813	Rtcb	87	95.455	Rattus_norvegicus
ENSCAFG00020018953	-	99	86.199	ENSRBIG00000042090	RTCB	87	86.395	Rhinopithecus_bieti
ENSCAFG00020018953	-	99	91.591	ENSSBOG00000020085	-	87	91.591	Saimiri_boliviensis_boliviensis
ENSCAFG00020018953	-	93	95.355	ENSSHAG00000016277	RTCB	86	95.355	Sarcophilus_harrisii
ENSCAFG00020018953	-	99	89.318	ENSSFOG00015011572	RTCB	87	89.318	Scleropages_formosus
ENSCAFG00020018953	-	99	89.091	ENSSFOG00015000763	rtcb	87	89.091	Scleropages_formosus
ENSCAFG00020018953	-	99	88.409	ENSSMAG00000005096	rtcb	87	86.364	Scophthalmus_maximus
ENSCAFG00020018953	-	99	89.773	ENSSDUG00000012605	rtcb	87	89.773	Seriola_dumerili
ENSCAFG00020018953	-	99	89.773	ENSSLDG00000019458	rtcb	87	89.773	Seriola_lalandi_dorsalis
ENSCAFG00020018953	-	68	71.572	ENSSARG00000004799	-	63	71.572	Sorex_araneus
ENSCAFG00020018953	-	99	92.273	ENSSPUG00000012814	RTCB	87	92.273	Sphenodon_punctatus
ENSCAFG00020018953	-	99	90.909	ENSSPAG00000004623	rtcb	87	90.909	Stegastes_partitus
ENSCAFG00020018953	-	99	96.136	ENSSSCG00000000158	RTCB	87	96.136	Sus_scrofa
ENSCAFG00020018953	-	99	93.636	ENSTGUG00000010947	RTCB	87	93.636	Taeniopygia_guttata
ENSCAFG00020018953	-	90	91.392	ENSTRUG00000009880	rtcb	100	87.952	Takifugu_rubripes
ENSCAFG00020018953	-	99	90.000	ENSTNIG00000002484	rtcb	87	90.000	Tetraodon_nigroviridis
ENSCAFG00020018953	-	99	81.818	ENSTBEG00000004418	RTCB	87	81.818	Tupaia_belangeri
ENSCAFG00020018953	-	99	95.000	ENSTTRG00000006417	RTCB	94	95.000	Tursiops_truncatus
ENSCAFG00020018953	-	99	96.364	ENSUAMG00000022792	RTCB	87	96.364	Ursus_americanus
ENSCAFG00020018953	-	99	96.364	ENSUMAG00000017225	RTCB	87	96.364	Ursus_maritimus
ENSCAFG00020018953	-	99	96.136	ENSVPAG00000005375	RTCB	87	96.136	Vicugna_pacos
ENSCAFG00020018953	-	99	96.364	ENSVVUG00000023408	RTCB	87	96.364	Vulpes_vulpes
ENSCAFG00020018953	-	99	90.909	ENSXETG00000011523	rtcb	87	90.909	Xenopus_tropicalis
ENSCAFG00020018953	-	99	90.909	ENSXMAG00000002855	rtcb	87	90.909	Xiphophorus_maculatus