EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020018979 (Gene tree)
Gene ID: 112669196
Gene Symbol: RRP1
Alias: D21S2056E|NNP-1|Nop52|RRP1A
Full Name: ribosomal RNA processing 1
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 14045 bases
Position: chrQKWQ01000396.1:2036493-2050537
Accession: 112669196
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020024123	Nop52	PF05997.12	1.2e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020027856	RRP1-201	1762	XM_025462105	ENSCAFP00020024123	454 (aa)	XP_025317890	UPI00022572C7

Gene Model

Click here to download ENSCAFG00020018979's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020018979's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020018979	RRP1	74	55.263	ENSCAFG00020018901	RRP1B	65	44.856

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020018979	RRP1	92	71.496	ENSG00000160214	RRP1	98	86.364	Homo_sapiens
ENSCAFG00020018979	RRP1	76	51.567	ENSAMEG00000011401	RRP1B	59	44.875	Ailuropoda_melanoleuca
ENSCAFG00020018979	RRP1	98	81.360	ENSAMEG00000011448	RRP1	98	81.400	Ailuropoda_melanoleuca
ENSCAFG00020018979	RRP1	62	51.418	ENSACIG00000019121	rrp1	57	51.064	Amphilophus_citrinellus
ENSCAFG00020018979	RRP1	89	46.845	ENSAOCG00000017894	-	89	47.932	Amphiprion_ocellaris
ENSCAFG00020018979	RRP1	82	52.660	ENSACAG00000017851	RRP1B	54	48.655	Anolis_carolinensis
ENSCAFG00020018979	RRP1	99	67.253	ENSANAG00000037815	RRP1	99	67.253	Aotus_nancymaae
ENSCAFG00020018979	RRP1	99	65.784	ENSBTAG00000003981	RRP1	98	65.939	Bos_taurus
ENSCAFG00020018979	RRP1	95	68.879	ENSCJAG00000043205	RRP1	90	68.879	Callithrix_jacchus
ENSCAFG00020018979	RRP1	100	100.000	ENSCAFG00000010646	RRP1	100	100.000	Canis_familiaris
ENSCAFG00020018979	RRP1	99	68.000	ENSCHIG00000020948	RRP1	98	67.991	Capra_hircus
ENSCAFG00020018979	RRP1	97	65.121	ENSTSYG00000012831	RRP1	97	65.934	Carlito_syrichta
ENSCAFG00020018979	RRP1	82	62.312	ENSCAPG00000008576	RRP1	89	67.318	Cavia_aperea
ENSCAFG00020018979	RRP1	97	67.621	ENSCPOG00000038986	RRP1	97	68.820	Cavia_porcellus
ENSCAFG00020018979	RRP1	75	48.603	ENSCPOG00000002396	RRP1B	50	46.774	Cavia_porcellus
ENSCAFG00020018979	RRP1	92	72.104	ENSCCAG00000029828	RRP1	99	68.996	Cebus_capucinus
ENSCAFG00020018979	RRP1	74	54.971	ENSCCAG00000029384	RRP1B	51	54.386	Cebus_capucinus
ENSCAFG00020018979	RRP1	92	71.327	ENSCATG00000015632	RRP1	99	68.443	Cercocebus_atys
ENSCAFG00020018979	RRP1	94	68.203	ENSCLAG00000011639	RRP1	99	66.740	Chinchilla_lanigera
ENSCAFG00020018979	RRP1	72	78.614	ENSCSAG00000007936	RRP1	100	78.614	Chlorocebus_sabaeus
ENSCAFG00020018979	RRP1	74	42.690	ENSCHOG00000002426	-	55	42.398	Choloepus_hoffmanni
ENSCAFG00020018979	RRP1	74	58.892	ENSCPBG00000010310	RRP1B	54	51.613	Chrysemys_picta_bellii
ENSCAFG00020018979	RRP1	74	34.211	ENSCING00000003304	-	73	33.333	Ciona_intestinalis
ENSCAFG00020018979	RRP1	69	73.567	ENSCANG00000042611	RRP1	72	72.755	Colobus_angolensis_palliatus
ENSCAFG00020018979	RRP1	99	67.550	ENSCGRG00001011920	Rrp1	98	66.814	Cricetulus_griseus_chok1gshd
ENSCAFG00020018979	RRP1	74	53.529	ENSCGRG00001023882	-	62	65.278	Cricetulus_griseus_chok1gshd
ENSCAFG00020018979	RRP1	99	67.550	ENSCGRG00000008915	Rrp1	98	66.814	Cricetulus_griseus_crigri
ENSCAFG00020018979	RRP1	79	49.457	ENSCSEG00000020711	-	80	45.103	Cynoglossus_semilaevis
ENSCAFG00020018979	RRP1	76	48.000	ENSCVAG00000017568	-	93	46.486	Cyprinodon_variegatus
ENSCAFG00020018979	RRP1	74	47.904	ENSDARG00000103337	rrp1	53	44.974	Danio_rerio
ENSCAFG00020018979	RRP1	96	68.973	ENSDNOG00000019880	RRP1	96	68.527	Dasypus_novemcinctus
ENSCAFG00020018979	RRP1	88	64.493	ENSDORG00000002104	Rrp1	98	65.301	Dipodomys_ordii
ENSCAFG00020018979	RRP1	72	60.671	ENSETEG00000002963	-	73	60.671	Echinops_telfairi
ENSCAFG00020018979	RRP1	98	73.333	ENSEASG00005001673	RRP1	100	72.889	Equus_asinus_asinus
ENSCAFG00020018979	RRP1	83	49.096	ENSEASG00005001687	RRP1B	51	48.214	Equus_asinus_asinus
ENSCAFG00020018979	RRP1	83	48.837	ENSECAG00000018018	RRP1B	51	47.959	Equus_caballus
ENSCAFG00020018979	RRP1	98	73.333	ENSECAG00000015703	RRP1	100	73.111	Equus_caballus
ENSCAFG00020018979	RRP1	96	43.074	ENSELUG00000015885	-	92	48.817	Esox_lucius
ENSCAFG00020018979	RRP1	92	81.190	ENSFCAG00000008434	RRP1	98	78.808	Felis_catus
ENSCAFG00020018979	RRP1	99	65.410	ENSFDAG00000013728	RRP1	99	64.680	Fukomys_damarensis
ENSCAFG00020018979	RRP1	75	46.313	ENSGMOG00000001953	-	54	44.444	Gadus_morhua
ENSCAFG00020018979	RRP1	83	44.987	ENSGACG00000001438	rrp1	59	44.588	Gasterosteus_aculeatus
ENSCAFG00020018979	RRP1	76	58.405	ENSGAGG00000000375	RRP1B	57	51.030	Gopherus_agassizii
ENSCAFG00020018979	RRP1	92	71.259	ENSGGOG00000000173	RRP1	99	68.627	Gorilla_gorilla
ENSCAFG00020018979	RRP1	78	49.030	ENSHGLG00000004968	RRP1B	62	46.445	Heterocephalus_glaber_female
ENSCAFG00020018979	RRP1	94	66.512	ENSHGLG00000017085	RRP1	94	64.912	Heterocephalus_glaber_female
ENSCAFG00020018979	RRP1	75	45.055	ENSIPUG00000000673	-	69	45.556	Ictalurus_punctatus
ENSCAFG00020018979	RRP1	73	52.770	ENSSTOG00000011790	RRP1B	52	48.947	Ictidomys_tridecemlineatus
ENSCAFG00020018979	RRP1	95	69.655	ENSSTOG00000011116	RRP1	98	68.265	Ictidomys_tridecemlineatus
ENSCAFG00020018979	RRP1	99	66.593	ENSJJAG00000018886	Rrp1	98	66.887	Jaculus_jaculus
ENSCAFG00020018979	RRP1	73	49.855	ENSKMAG00000005539	rrp1	51	49.855	Kryptolebias_marmoratus
ENSCAFG00020018979	RRP1	75	47.191	ENSLBEG00000021417	RRP1	93	47.733	Labrus_bergylta
ENSCAFG00020018979	RRP1	74	56.034	ENSLACG00000017332	-	51	52.742	Latimeria_chalumnae
ENSCAFG00020018979	RRP1	75	51.765	ENSLOCG00000004064	-	50	49.451	Lepisosteus_oculatus
ENSCAFG00020018979	RRP1	93	50.233	ENSLAFG00000000766	RRP1B	87	52.846	Loxodonta_africana
ENSCAFG00020018979	RRP1	83	69.610	ENSLAFG00000022901	RRP1	97	62.039	Loxodonta_africana
ENSCAFG00020018979	RRP1	99	67.949	ENSMFAG00000003202	RRP1	99	68.511	Macaca_fascicularis
ENSCAFG00020018979	RRP1	90	47.743	ENSMFAG00000039152	RRP1B	55	45.833	Macaca_fascicularis
ENSCAFG00020018979	RRP1	99	68.162	ENSMMUG00000012304	RRP1	99	68.723	Macaca_mulatta
ENSCAFG00020018979	RRP1	90	47.743	ENSMMUG00000000104	RRP1B	56	45.833	Macaca_mulatta
ENSCAFG00020018979	RRP1	99	67.735	ENSMNEG00000031210	RRP1	99	68.298	Macaca_nemestrina
ENSCAFG00020018979	RRP1	90	47.743	ENSMNEG00000034269	RRP1B	55	45.833	Macaca_nemestrina
ENSCAFG00020018979	RRP1	90	65.035	ENSMLEG00000037797	RRP1	99	66.588	Mandrillus_leucophaeus
ENSCAFG00020018979	RRP1	83	54.167	ENSMGAG00000014591	RRP1B	50	52.284	Meleagris_gallopavo
ENSCAFG00020018979	RRP1	87	59.204	ENSMAUG00000017653	Rrp1	97	55.679	Mesocricetus_auratus
ENSCAFG00020018979	RRP1	100	67.749	ENSMICG00000004700	RRP1	100	67.532	Microcebus_murinus
ENSCAFG00020018979	RRP1	100	55.200	ENSMOCG00000015687	Rrp1	100	56.000	Microtus_ochrogaster
ENSCAFG00020018979	RRP1	78	46.667	ENSMMOG00000019175	rrp1	91	45.822	Mola_mola
ENSCAFG00020018979	RRP1	76	62.824	ENSMODG00000021036	-	54	59.892	Monodelphis_domestica
ENSCAFG00020018979	RRP1	80	47.945	ENSMALG00000010310	rrp1	94	47.123	Monopterus_albus
ENSCAFG00020018979	RRP1	99	58.431	MGP_CAROLIEiJ_G0015508	Rrp1	99	57.143	Mus_caroli
ENSCAFG00020018979	RRP1	72	50.602	MGP_CAROLIEiJ_G0021376	Rrp1b	53	65.079	Mus_caroli
ENSCAFG00020018979	RRP1	72	52.108	ENSMUSG00000058392	Rrp1b	53	66.667	Mus_musculus
ENSCAFG00020018979	RRP1	99	58.039	ENSMUSG00000061032	Rrp1	99	57.143	Mus_musculus
ENSCAFG00020018979	RRP1	99	58.008	MGP_PahariEiJ_G0030921	Rrp1	85	84.100	Mus_pahari
ENSCAFG00020018979	RRP1	74	51.613	MGP_PahariEiJ_G0023695	Rrp1b	60	62.500	Mus_pahari
ENSCAFG00020018979	RRP1	72	52.410	MGP_SPRETEiJ_G0022290	Rrp1b	53	66.667	Mus_spretus
ENSCAFG00020018979	RRP1	55	80.800	MGP_SPRETEiJ_G0016321	Rrp1	99	57.534	Mus_spretus
ENSCAFG00020018979	RRP1	91	72.553	ENSMPUG00000009826	RRP1	100	72.211	Mustela_putorius_furo
ENSCAFG00020018979	RRP1	93	48.618	ENSMLUG00000007738	RRP1B	57	48.618	Myotis_lucifugus
ENSCAFG00020018979	RRP1	90	90.393	ENSMLUG00000017788	RRP1	88	81.227	Myotis_lucifugus
ENSCAFG00020018979	RRP1	88	52.772	ENSNGAG00000022344	Rrp1	92	52.466	Nannospalax_galili
ENSCAFG00020018979	RRP1	92	70.309	ENSNLEG00000034734	RRP1	99	67.974	Nomascus_leucogenys
ENSCAFG00020018979	RRP1	80	67.680	ENSOPRG00000001319	RRP1	100	66.298	Ochotona_princeps
ENSCAFG00020018979	RRP1	79	43.052	ENSONIG00000004264	rrp1	54	42.500	Oreochromis_niloticus
ENSCAFG00020018979	RRP1	74	60.778	ENSOANG00000006472	-	100	53.351	Ornithorhynchus_anatinus
ENSCAFG00020018979	RRP1	52	81.579	ENSOCUG00000022843	-	77	82.119	Oryctolagus_cuniculus
ENSCAFG00020018979	RRP1	73	53.313	ENSOGAG00000009872	RRP1B	50	53.313	Otolemur_garnettii
ENSCAFG00020018979	RRP1	87	71.820	ENSOGAG00000006105	RRP1	98	66.083	Otolemur_garnettii
ENSCAFG00020018979	RRP1	99	63.457	ENSOARG00000011434	RRP1	98	64.159	Ovis_aries
ENSCAFG00020018979	RRP1	92	71.259	ENSPPAG00000029050	RRP1	99	67.949	Pan_paniscus
ENSCAFG00020018979	RRP1	91	81.295	ENSPPRG00000010656	RRP1	98	78.540	Panthera_pardus
ENSCAFG00020018979	RRP1	85	67.822	ENSPTIG00000019473	RRP1	89	67.822	Panthera_tigris_altaica
ENSCAFG00020018979	RRP1	69	50.938	ENSPTIG00000016894	RRP1B	52	49.383	Panthera_tigris_altaica
ENSCAFG00020018979	RRP1	92	71.259	ENSPTRG00000013962	RRP1	99	67.949	Pan_troglodytes
ENSCAFG00020018979	RRP1	92	71.801	ENSPANG00000015097	RRP1	99	68.590	Papio_anubis
ENSCAFG00020018979	RRP1	78	38.649	ENSPMGG00000007512	-	88	38.196	Periophthalmus_magnuspinnatus
ENSCAFG00020018979	RRP1	97	67.338	ENSPEMG00000018421	Rrp1	98	66.009	Peromyscus_maniculatus_bairdii
ENSCAFG00020018979	RRP1	76	54.624	ENSPCIG00000015513	RRP1B	52	51.979	Phascolarctos_cinereus
ENSCAFG00020018979	RRP1	91	57.895	ENSPCIG00000015523	-	82	60.417	Phascolarctos_cinereus
ENSCAFG00020018979	RRP1	81	48.936	ENSPLAG00000016684	-	53	48.404	Poecilia_latipinna
ENSCAFG00020018979	RRP1	92	71.496	ENSPPYG00000011474	RRP1	99	67.904	Pongo_abelii
ENSCAFG00020018979	RRP1	79	56.546	ENSPCAG00000008370	-	98	56.131	Procavia_capensis
ENSCAFG00020018979	RRP1	82	72.727	ENSPCOG00000017706	RRP1	100	63.404	Propithecus_coquereli
ENSCAFG00020018979	RRP1	82	60.714	ENSPVAG00000009925	-	81	60.714	Pteropus_vampyrus
ENSCAFG00020018979	RRP1	96	64.000	ENSRNOG00000001203	Rrp1	100	66.517	Rattus_norvegicus
ENSCAFG00020018979	RRP1	90	41.232	ENSRBIG00000041689	RRP1B	54	39.492	Rhinopithecus_bieti
ENSCAFG00020018979	RRP1	99	66.667	ENSRBIG00000032082	RRP1	99	67.735	Rhinopithecus_bieti
ENSCAFG00020018979	RRP1	92	71.090	ENSRROG00000039799	RRP1	99	68.298	Rhinopithecus_roxellana
ENSCAFG00020018979	RRP1	90	47.743	ENSRROG00000031499	RRP1B	61	45.270	Rhinopithecus_roxellana
ENSCAFG00020018979	RRP1	87	73.048	ENSSBOG00000034689	RRP1	99	68.071	Saimiri_boliviensis_boliviensis
ENSCAFG00020018979	RRP1	71	60.991	ENSSHAG00000010304	-	98	61.420	Sarcophilus_harrisii
ENSCAFG00020018979	RRP1	68	48.640	ENSSFOG00015003932	-	58	43.236	Scleropages_formosus
ENSCAFG00020018979	RRP1	76	50.139	ENSSMAG00000016847	-	80	49.235	Scophthalmus_maximus
ENSCAFG00020018979	RRP1	76	53.371	ENSSPUG00000002834	RRP1B	52	49.272	Sphenodon_punctatus
ENSCAFG00020018979	RRP1	80	52.162	ENSSSCG00000021698	RRP1B	56	50.260	Sus_scrofa
ENSCAFG00020018979	RRP1	99	68.928	ENSSSCG00000037061	RRP1	99	68.791	Sus_scrofa
ENSCAFG00020018979	RRP1	75	49.148	ENSTRUG00000017592	rrp1	97	48.864	Takifugu_rubripes
ENSCAFG00020018979	RRP1	93	43.052	ENSTNIG00000005053	rrp1	54	50.291	Tetraodon_nigroviridis
ENSCAFG00020018979	RRP1	81	45.685	ENSTBEG00000000422	RRP1B	67	44.279	Tupaia_belangeri
ENSCAFG00020018979	RRP1	68	76.510	ENSTBEG00000001260	-	66	76.259	Tupaia_belangeri
ENSCAFG00020018979	RRP1	95	44.966	ENSTTRG00000000723	RRP1B	61	45.154	Tursiops_truncatus
ENSCAFG00020018979	RRP1	70	76.471	ENSTTRG00000011162	RRP1	83	76.471	Tursiops_truncatus
ENSCAFG00020018979	RRP1	74	79.701	ENSUAMG00000014189	-	99	79.403	Ursus_americanus
ENSCAFG00020018979	RRP1	64	54.027	ENSUMAG00000025510	RRP1B	57	53.020	Ursus_maritimus
ENSCAFG00020018979	RRP1	91	82.126	ENSUMAG00000025507	RRP1	100	81.934	Ursus_maritimus
ENSCAFG00020018979	RRP1	69	96.497	ENSVVUG00000024498	-	79	96.497	Vulpes_vulpes
ENSCAFG00020018979	RRP1	84	46.173	ENSXMAG00000023123	-	55	42.094	Xiphophorus_maculatus