EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020019147 (Gene tree)
Gene ID: 112659801
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 29092 bases
Position: chrQKWQ01000243.1:28875676-28904767
Accession: 25734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020024317	MRP-S27	PF10037.9	7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020028076	PTCD2-201	1071	-	ENSCAFP00020024317	356 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020019147's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020019147's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020019147	PTCD2	97	78.613	ENSG00000049883	PTCD2	100	79.310	Homo_sapiens
ENSCAFG00020019147	PTCD2	97	48.266	ENSAPOG00000020682	ptcd2	91	48.266	Acanthochromis_polyacanthus
ENSCAFG00020019147	PTCD2	97	88.439	ENSAMEG00000007194	PTCD2	89	88.439	Ailuropoda_melanoleuca
ENSCAFG00020019147	PTCD2	97	43.266	ENSACIG00000002053	ptcd2	100	43.266	Amphilophus_citrinellus
ENSCAFG00020019147	PTCD2	97	47.688	ENSAOCG00000006616	ptcd2	89	47.688	Amphiprion_ocellaris
ENSCAFG00020019147	PTCD2	97	47.443	ENSAPEG00000022926	ptcd2	89	47.443	Amphiprion_percula
ENSCAFG00020019147	PTCD2	97	60.116	ENSACAG00000009747	PTCD2	88	60.116	Anolis_carolinensis
ENSCAFG00020019147	PTCD2	97	80.636	ENSANAG00000029353	PTCD2	89	80.636	Aotus_nancymaae
ENSCAFG00020019147	PTCD2	97	48.703	ENSACLG00000027742	ptcd2	89	48.703	Astatotilapia_calliptera
ENSCAFG00020019147	PTCD2	89	46.519	ENSAMXG00000029404	ptcd2	84	46.519	Astyanax_mexicanus
ENSCAFG00020019147	PTCD2	97	81.792	ENSBTAG00000014675	PTCD2	90	81.792	Bos_taurus
ENSCAFG00020019147	PTCD2	97	79.769	ENSCJAG00000016364	PTCD2	89	79.769	Callithrix_jacchus
ENSCAFG00020019147	PTCD2	97	100.000	ENSCAFG00000007982	PTCD2	81	100.000	Canis_familiaris
ENSCAFG00020019147	PTCD2	97	81.792	ENSCHIG00000017118	PTCD2	90	81.792	Capra_hircus
ENSCAFG00020019147	PTCD2	97	73.699	ENSCPOG00000040168	PTCD2	90	73.699	Cavia_porcellus
ENSCAFG00020019147	PTCD2	97	79.480	ENSCCAG00000029389	-	89	79.480	Cebus_capucinus
ENSCAFG00020019147	PTCD2	79	72.695	ENSCCAG00000021996	-	87	72.695	Cebus_capucinus
ENSCAFG00020019147	PTCD2	97	77.746	ENSCATG00000019069	PTCD2	90	77.746	Cercocebus_atys
ENSCAFG00020019147	PTCD2	97	74.855	ENSCLAG00000000072	PTCD2	90	74.855	Chinchilla_lanigera
ENSCAFG00020019147	PTCD2	97	79.480	ENSCSAG00000015623	PTCD2	90	79.480	Chlorocebus_sabaeus
ENSCAFG00020019147	PTCD2	97	57.759	ENSCHOG00000010634	PTCD2	100	57.759	Choloepus_hoffmanni
ENSCAFG00020019147	PTCD2	97	59.249	ENSCPBG00000000216	PTCD2	89	59.249	Chrysemys_picta_bellii
ENSCAFG00020019147	PTCD2	97	78.035	ENSCANG00000035636	PTCD2	89	78.035	Colobus_angolensis_palliatus
ENSCAFG00020019147	PTCD2	97	73.699	ENSCGRG00001015289	Ptcd2	76	73.699	Cricetulus_griseus_chok1gshd
ENSCAFG00020019147	PTCD2	97	73.699	ENSCGRG00000006193	Ptcd2	76	73.699	Cricetulus_griseus_crigri
ENSCAFG00020019147	PTCD2	97	46.243	ENSCVAG00000001285	ptcd2	88	46.243	Cyprinodon_variegatus
ENSCAFG00020019147	PTCD2	97	45.821	ENSDARG00000035391	ptcd2	90	45.821	Danio_rerio
ENSCAFG00020019147	PTCD2	98	77.586	ENSDNOG00000008719	PTCD2	91	77.586	Dasypus_novemcinctus
ENSCAFG00020019147	PTCD2	97	77.746	ENSDORG00000004921	Ptcd2	89	77.746	Dipodomys_ordii
ENSCAFG00020019147	PTCD2	97	70.893	ENSETEG00000016542	PTCD2	89	70.893	Echinops_telfairi
ENSCAFG00020019147	PTCD2	97	81.503	ENSEASG00005018038	PTCD2	91	81.503	Equus_asinus_asinus
ENSCAFG00020019147	PTCD2	97	81.503	ENSECAG00000007022	PTCD2	89	81.503	Equus_caballus
ENSCAFG00020019147	PTCD2	97	73.699	ENSEEUG00000014031	PTCD2	89	73.699	Erinaceus_europaeus
ENSCAFG00020019147	PTCD2	97	51.009	ENSELUG00000003584	ptcd2	90	51.009	Esox_lucius
ENSCAFG00020019147	PTCD2	88	86.032	ENSFCAG00000045432	PTCD2	74	86.032	Felis_catus
ENSCAFG00020019147	PTCD2	92	53.211	ENSFALG00000010299	PTCD2	99	53.211	Ficedula_albicollis
ENSCAFG00020019147	PTCD2	97	74.855	ENSFDAG00000018461	PTCD2	90	74.855	Fukomys_damarensis
ENSCAFG00020019147	PTCD2	97	50.862	ENSGMOG00000003637	ptcd2	90	50.862	Gadus_morhua
ENSCAFG00020019147	PTCD2	97	52.312	ENSGALG00000038260	PTCD2	91	52.312	Gallus_gallus
ENSCAFG00020019147	PTCD2	97	60.694	ENSGAGG00000021952	PTCD2	89	60.694	Gopherus_agassizii
ENSCAFG00020019147	PTCD2	97	78.613	ENSGGOG00000010695	PTCD2	89	78.613	Gorilla_gorilla
ENSCAFG00020019147	PTCD2	97	48.703	ENSHBUG00000009191	ptcd2	89	48.703	Haplochromis_burtoni
ENSCAFG00020019147	PTCD2	97	74.566	ENSHGLG00000001234	PTCD2	90	74.566	Heterocephalus_glaber_female
ENSCAFG00020019147	PTCD2	97	74.566	ENSHGLG00100015419	PTCD2	90	74.566	Heterocephalus_glaber_male
ENSCAFG00020019147	PTCD2	97	48.415	ENSHCOG00000001703	ptcd2	90	48.415	Hippocampus_comes
ENSCAFG00020019147	PTCD2	90	47.352	ENSIPUG00000006080	ptcd2	89	46.199	Ictalurus_punctatus
ENSCAFG00020019147	PTCD2	97	78.963	ENSSTOG00000006596	PTCD2	91	78.963	Ictidomys_tridecemlineatus
ENSCAFG00020019147	PTCD2	97	77.168	ENSJJAG00000024388	Ptcd2	90	77.168	Jaculus_jaculus
ENSCAFG00020019147	PTCD2	97	45.665	ENSKMAG00000009329	ptcd2	90	45.665	Kryptolebias_marmoratus
ENSCAFG00020019147	PTCD2	98	48.711	ENSLBEG00000024871	ptcd2	89	48.711	Labrus_bergylta
ENSCAFG00020019147	PTCD2	97	54.755	ENSLOCG00000011122	ptcd2	90	54.755	Lepisosteus_oculatus
ENSCAFG00020019147	PTCD2	77	79.562	ENSLAFG00000004115	PTCD2	88	79.562	Loxodonta_africana
ENSCAFG00020019147	PTCD2	97	78.324	ENSMFAG00000031516	PTCD2	89	78.324	Macaca_fascicularis
ENSCAFG00020019147	PTCD2	97	77.746	ENSMNEG00000007537	PTCD2	90	77.746	Macaca_nemestrina
ENSCAFG00020019147	PTCD2	97	77.746	ENSMLEG00000031093	PTCD2	89	77.746	Mandrillus_leucophaeus
ENSCAFG00020019147	PTCD2	97	48.266	ENSMAMG00000018529	ptcd2	91	48.266	Mastacembelus_armatus
ENSCAFG00020019147	PTCD2	97	48.703	ENSMZEG00005003625	ptcd2	89	48.703	Maylandia_zebra
ENSCAFG00020019147	PTCD2	97	52.890	ENSMGAG00000005033	PTCD2	99	52.890	Meleagris_gallopavo
ENSCAFG00020019147	PTCD2	97	55.780	ENSMAUG00000020253	Ptcd2	89	55.780	Mesocricetus_auratus
ENSCAFG00020019147	PTCD2	97	80.636	ENSMICG00000004535	PTCD2	89	80.636	Microcebus_murinus
ENSCAFG00020019147	PTCD2	97	73.988	ENSMOCG00000019985	Ptcd2	91	73.988	Microtus_ochrogaster
ENSCAFG00020019147	PTCD2	97	60.983	ENSMODG00000001695	PTCD2	90	60.983	Monodelphis_domestica
ENSCAFG00020019147	PTCD2	97	48.555	ENSMALG00000022372	ptcd2	91	48.555	Monopterus_albus
ENSCAFG00020019147	PTCD2	97	72.254	MGP_CAROLIEiJ_G0018829	Ptcd2	91	72.254	Mus_caroli
ENSCAFG00020019147	PTCD2	97	70.809	ENSMUSG00000021650	Ptcd2	91	70.809	Mus_musculus
ENSCAFG00020019147	PTCD2	97	74.277	MGP_PahariEiJ_G0015904	Ptcd2	91	74.277	Mus_pahari
ENSCAFG00020019147	PTCD2	97	71.676	MGP_SPRETEiJ_G0019711	Ptcd2	91	71.676	Mus_spretus
ENSCAFG00020019147	PTCD2	97	89.306	ENSMPUG00000014401	PTCD2	90	89.306	Mustela_putorius_furo
ENSCAFG00020019147	PTCD2	97	81.214	ENSMLUG00000007374	PTCD2	89	81.214	Myotis_lucifugus
ENSCAFG00020019147	PTCD2	98	74.286	ENSNGAG00000005027	Ptcd2	91	74.286	Nannospalax_galili
ENSCAFG00020019147	PTCD2	93	48.338	ENSNBRG00000000092	-	100	48.338	Neolamprologus_brichardi
ENSCAFG00020019147	PTCD2	97	48.991	ENSNBRG00000008174	ptcd2	91	48.991	Neolamprologus_brichardi
ENSCAFG00020019147	PTCD2	98	78.448	ENSNLEG00000004516	PTCD2	90	78.448	Nomascus_leucogenys
ENSCAFG00020019147	PTCD2	84	54.000	ENSMEUG00000014012	-	82	53.035	Notamacropus_eugenii
ENSCAFG00020019147	PTCD2	97	73.121	ENSOPRG00000007290	PTCD2	89	73.121	Ochotona_princeps
ENSCAFG00020019147	PTCD2	97	75.434	ENSODEG00000016417	PTCD2	90	75.434	Octodon_degus
ENSCAFG00020019147	PTCD2	81	50.523	ENSONIG00000011269	ptcd2	84	50.523	Oreochromis_niloticus
ENSCAFG00020019147	PTCD2	97	77.168	ENSOCUG00000007970	PTCD2	90	77.168	Oryctolagus_cuniculus
ENSCAFG00020019147	PTCD2	97	47.550	ENSORLG00000003851	ptcd2	89	47.550	Oryzias_latipes
ENSCAFG00020019147	PTCD2	97	46.974	ENSORLG00020009823	ptcd2	90	46.974	Oryzias_latipes_hni
ENSCAFG00020019147	PTCD2	97	46.686	ENSORLG00015016777	ptcd2	99	46.686	Oryzias_latipes_hsok
ENSCAFG00020019147	PTCD2	97	45.821	ENSOMEG00000012396	ptcd2	84	45.821	Oryzias_melastigma
ENSCAFG00020019147	PTCD2	97	77.457	ENSOGAG00000008390	PTCD2	89	77.457	Otolemur_garnettii
ENSCAFG00020019147	PTCD2	97	80.925	ENSOARG00000005087	PTCD2	89	80.925	Ovis_aries
ENSCAFG00020019147	PTCD2	97	78.613	ENSPPAG00000028480	PTCD2	89	78.613	Pan_paniscus
ENSCAFG00020019147	PTCD2	97	78.324	ENSPTRG00000016968	PTCD2	89	78.324	Pan_troglodytes
ENSCAFG00020019147	PTCD2	97	77.971	ENSPANG00000006611	PTCD2	89	77.971	Papio_anubis
ENSCAFG00020019147	PTCD2	97	49.138	ENSPKIG00000019896	ptcd2	90	49.138	Paramormyrops_kingsleyae
ENSCAFG00020019147	PTCD2	85	63.576	ENSPSIG00000014559	PTCD2	93	63.576	Pelodiscus_sinensis
ENSCAFG00020019147	PTCD2	97	72.414	ENSPEMG00000000884	Ptcd2	91	72.414	Peromyscus_maniculatus_bairdii
ENSCAFG00020019147	PTCD2	97	62.717	ENSPCIG00000029047	PTCD2	90	62.717	Phascolarctos_cinereus
ENSCAFG00020019147	PTCD2	91	46.769	ENSPLAG00000010456	ptcd2	90	46.243	Poecilia_latipinna
ENSCAFG00020019147	PTCD2	97	46.532	ENSPREG00000021797	ptcd2	88	46.532	Poecilia_reticulata
ENSCAFG00020019147	PTCD2	97	69.942	ENSPPYG00000015543	PTCD2	88	69.942	Pongo_abelii
ENSCAFG00020019147	PTCD2	76	69.485	ENSPCAG00000006806	PTCD2	87	69.485	Procavia_capensis
ENSCAFG00020019147	PTCD2	97	79.480	ENSPVAG00000010935	PTCD2	89	79.480	Pteropus_vampyrus
ENSCAFG00020019147	PTCD2	97	48.703	ENSPNYG00000003122	ptcd2	89	48.703	Pundamilia_nyererei
ENSCAFG00020019147	PTCD2	97	50.716	ENSPNAG00000021490	ptcd2	91	51.003	Pygocentrus_nattereri
ENSCAFG00020019147	PTCD2	97	75.723	ENSRNOG00000028403	Ptcd2	91	75.723	Rattus_norvegicus
ENSCAFG00020019147	PTCD2	97	73.410	ENSRBIG00000032929	PTCD2	89	73.410	Rhinopithecus_bieti
ENSCAFG00020019147	PTCD2	97	78.613	ENSRROG00000000080	PTCD2	90	78.613	Rhinopithecus_roxellana
ENSCAFG00020019147	PTCD2	98	78.161	ENSSBOG00000018911	PTCD2	91	78.161	Saimiri_boliviensis_boliviensis
ENSCAFG00020019147	PTCD2	97	61.850	ENSSHAG00000003833	PTCD2	89	61.850	Sarcophilus_harrisii
ENSCAFG00020019147	PTCD2	90	50.313	ENSSFOG00015015415	ptcd2	83	50.313	Scleropages_formosus
ENSCAFG00020019147	PTCD2	97	45.376	ENSSMAG00000010350	ptcd2	90	45.376	Scophthalmus_maximus
ENSCAFG00020019147	PTCD2	97	48.844	ENSSDUG00000008142	ptcd2	86	48.844	Seriola_dumerili
ENSCAFG00020019147	PTCD2	97	48.844	ENSSLDG00000015284	ptcd2	91	48.844	Seriola_lalandi_dorsalis
ENSCAFG00020019147	PTCD2	76	69.118	ENSSARG00000004983	PTCD2	87	69.118	Sorex_araneus
ENSCAFG00020019147	PTCD2	97	54.335	ENSSPUG00000000176	PTCD2	87	54.335	Sphenodon_punctatus
ENSCAFG00020019147	PTCD2	97	46.821	ENSSPAG00000008591	ptcd2	89	46.821	Stegastes_partitus
ENSCAFG00020019147	PTCD2	97	82.948	ENSSSCG00000016975	PTCD2	81	82.948	Sus_scrofa
ENSCAFG00020019147	PTCD2	96	53.936	ENSTGUG00000005705	PTCD2	99	53.936	Taeniopygia_guttata
ENSCAFG00020019147	PTCD2	97	76.879	ENSTBEG00000016559	PTCD2	89	76.879	Tupaia_belangeri
ENSCAFG00020019147	PTCD2	97	82.370	ENSTTRG00000011851	PTCD2	89	82.370	Tursiops_truncatus
ENSCAFG00020019147	PTCD2	97	89.017	ENSUAMG00000007583	PTCD2	81	89.017	Ursus_americanus
ENSCAFG00020019147	PTCD2	97	89.017	ENSUMAG00000007666	PTCD2	90	89.017	Ursus_maritimus
ENSCAFG00020019147	PTCD2	97	81.792	ENSVPAG00000009597	PTCD2	89	81.792	Vicugna_pacos
ENSCAFG00020019147	PTCD2	97	99.133	ENSVVUG00000007299	-	90	99.133	Vulpes_vulpes
ENSCAFG00020019147	PTCD2	97	52.738	ENSXETG00000031652	PTCD2	91	52.738	Xenopus_tropicalis
ENSCAFG00020019147	PTCD2	91	46.462	ENSXMAG00000005940	ptcd2	82	45.665	Xiphophorus_maculatus