EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020019155 (Gene tree)
Gene ID: 112663303
Gene Symbol: ZNF408
Alias: FLJ12827
Full Name: zinc finger protein 408
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 4404 bases
Position: chrQKWQ01000458.1:6397526-6401929
Accession: 112663303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020024329	zf-C2H2	PF00096.26	1e-39	1	8
ENSCAFP00020024329	zf-C2H2	PF00096.26	1e-39	2	8
ENSCAFP00020024329	zf-C2H2	PF00096.26	1e-39	3	8
ENSCAFP00020024329	zf-C2H2	PF00096.26	1e-39	4	8
ENSCAFP00020024329	zf-C2H2	PF00096.26	1e-39	5	8
ENSCAFP00020024329	zf-C2H2	PF00096.26	1e-39	6	8
ENSCAFP00020024329	zf-C2H2	PF00096.26	1e-39	7	8
ENSCAFP00020024329	zf-C2H2	PF00096.26	1e-39	8	8
ENSCAFP00020024329	zf-met	PF12874.7	9.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020028088	ZNF408-201	2259	XM_025452039	ENSCAFP00020024329	752 (aa)	XP_025307824	UPI000DC6BA3D

Gene Model

Click here to download ENSCAFG00020019155's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020019155's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020019155	ZNF408	58	36.653	ENSCAFG00020017685	PRDM5	97	36.948

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020019155	ZNF408	95	81.844	ENSG00000175213	ZNF408	100	81.370	Homo_sapiens
ENSCAFG00020019155	ZNF408	97	87.654	ENSAMEG00000006904	ZNF408	100	87.106	Ailuropoda_melanoleuca
ENSCAFG00020019155	ZNF408	95	76.316	ENSANAG00000036294	ZNF408	100	75.848	Aotus_nancymaae
ENSCAFG00020019155	ZNF408	90	39.119	ENSAMXG00000032642	znf408	97	39.455	Astyanax_mexicanus
ENSCAFG00020019155	ZNF408	95	81.145	ENSCJAG00000019859	ZNF408	100	80.822	Callithrix_jacchus
ENSCAFG00020019155	ZNF408	100	99.867	ENSCAFG00000009143	ZNF408	100	99.867	Canis_familiaris
ENSCAFG00020019155	ZNF408	80	79.167	ENSCHIG00000025346	ZNF408	97	79.500	Capra_hircus
ENSCAFG00020019155	ZNF408	97	78.189	ENSTSYG00000025443	ZNF408	100	77.641	Carlito_syrichta
ENSCAFG00020019155	ZNF408	95	80.028	ENSCCAG00000029472	ZNF408	100	79.178	Cebus_capucinus
ENSCAFG00020019155	ZNF408	53	96.886	ENSCHOG00000009909	ZNF408	75	96.886	Choloepus_hoffmanni
ENSCAFG00020019155	ZNF408	97	70.041	ENSCGRG00001023588	Zfp408	100	69.631	Cricetulus_griseus_chok1gshd
ENSCAFG00020019155	ZNF408	97	70.041	ENSCGRG00000017618	Zfp408	100	69.631	Cricetulus_griseus_crigri
ENSCAFG00020019155	ZNF408	97	76.406	ENSDNOG00000047669	ZNF408	100	76.406	Dasypus_novemcinctus
ENSCAFG00020019155	ZNF408	96	68.741	ENSDORG00000000387	Zfp408	99	68.603	Dipodomys_ordii
ENSCAFG00020019155	ZNF408	85	62.478	ENSETEG00000017621	-	100	64.021	Echinops_telfairi
ENSCAFG00020019155	ZNF408	97	81.619	ENSEASG00005015461	ZNF408	100	81.481	Equus_asinus_asinus
ENSCAFG00020019155	ZNF408	97	81.756	ENSECAG00000010878	ZNF408	100	81.619	Equus_caballus
ENSCAFG00020019155	ZNF408	91	69.811	ENSEEUG00000010466	ZNF408	94	69.811	Erinaceus_europaeus
ENSCAFG00020019155	ZNF408	97	87.654	ENSFCAG00000029105	ZNF408	100	87.654	Felis_catus
ENSCAFG00020019155	ZNF408	95	81.844	ENSGGOG00000010152	ZNF408	100	81.370	Gorilla_gorilla
ENSCAFG00020019155	ZNF408	83	80.861	ENSLAFG00000027848	ZNF408	100	80.702	Loxodonta_africana
ENSCAFG00020019155	ZNF408	96	83.588	ENSMICG00000045320	ZNF408	100	83.539	Microcebus_murinus
ENSCAFG00020019155	ZNF408	70	55.051	ENSMODG00000019895	-	83	54.271	Monodelphis_domestica
ENSCAFG00020019155	ZNF408	95	87.029	ENSMPUG00000005490	ZNF408	100	86.557	Mustela_putorius_furo
ENSCAFG00020019155	ZNF408	97	70.289	ENSNGAG00000000309	Zfp408	99	70.151	Nannospalax_galili
ENSCAFG00020019155	ZNF408	97	80.685	ENSNLEG00000014132	ZNF408	100	80.548	Nomascus_leucogenys
ENSCAFG00020019155	ZNF408	96	62.672	ENSOPRG00000009225	ZNF408	99	62.121	Ochotona_princeps
ENSCAFG00020019155	ZNF408	97	75.720	ENSOCUG00000010953	ZNF408	100	75.583	Oryctolagus_cuniculus
ENSCAFG00020019155	ZNF408	83	82.137	ENSOGAG00000034080	ZNF408	100	81.978	Otolemur_garnettii
ENSCAFG00020019155	ZNF408	95	81.844	ENSPPAG00000034993	ZNF408	100	81.370	Pan_paniscus
ENSCAFG00020019155	ZNF408	97	87.654	ENSPPRG00000016866	ZNF408	100	87.654	Panthera_pardus
ENSCAFG00020019155	ZNF408	97	88.615	ENSPTIG00000015467	ZNF408	100	88.615	Panthera_tigris_altaica
ENSCAFG00020019155	ZNF408	95	81.983	ENSPTRG00000003551	ZNF408	100	81.507	Pan_troglodytes
ENSCAFG00020019155	ZNF408	75	72.035	ENSPEMG00000016757	Zfp408	99	71.150	Peromyscus_maniculatus_bairdii
ENSCAFG00020019155	ZNF408	51	48.586	ENSPFOG00000001760	-	92	48.072	Poecilia_formosa
ENSCAFG00020019155	ZNF408	51	49.606	ENSPMEG00000021147	-	72	49.606	Poecilia_mexicana
ENSCAFG00020019155	ZNF408	95	80.168	ENSPPYG00000003318	ZNF408	100	80.524	Pongo_abelii
ENSCAFG00020019155	ZNF408	97	75.720	ENSPCAG00000014001	ZNF408	100	75.720	Procavia_capensis
ENSCAFG00020019155	ZNF408	96	83.194	ENSPCOG00000028698	ZNF408	100	83.151	Propithecus_coquereli
ENSCAFG00020019155	ZNF408	97	82.716	ENSPVAG00000015791	ZNF408	100	81.481	Pteropus_vampyrus
ENSCAFG00020019155	ZNF408	95	79.666	ENSSBOG00000033023	ZNF408	100	78.493	Saimiri_boliviensis_boliviensis
ENSCAFG00020019155	ZNF408	100	82.580	ENSSSCG00000023097	ZNF408	100	82.314	Sus_scrofa
ENSCAFG00020019155	ZNF408	72	91.057	ENSTBEG00000004260	ZNF408	82	91.057	Tupaia_belangeri
ENSCAFG00020019155	ZNF408	97	88.340	ENSUAMG00000026154	ZNF408	100	87.929	Ursus_americanus
ENSCAFG00020019155	ZNF408	97	88.066	ENSUMAG00000014405	ZNF408	100	87.791	Ursus_maritimus
ENSCAFG00020019155	ZNF408	100	98.670	ENSVVUG00000026805	ZNF408	100	98.670	Vulpes_vulpes
ENSCAFG00020019155	ZNF408	50	55.673	ENSXETG00000001980	znf408	100	54.354	Xenopus_tropicalis
ENSCAFG00020019155	ZNF408	51	49.738	ENSXCOG00000002869	-	75	47.692	Xiphophorus_couchianus
ENSCAFG00020019155	ZNF408	51	49.219	ENSXMAG00000018347	-	72	48.177	Xiphophorus_maculatus