EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020019229 (Gene tree)
Gene ID: 112660143
Gene Symbol: -
Alias: -
Full Name: survival motor neuron protein-like
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 40363 bases
Position: chrQKWQ01000243.1:29621416-29661778
Accession: 112660143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020024422	SMN	PF06003.12	1.4e-106	1	1
ENSCAFP00020024421	SMN	PF06003.12	1.5e-106	1	1
ENSCAFP00020024424	SMN	PF06003.12	1.6e-106	1	1
ENSCAFP00020024420	SMN	PF06003.12	8.2e-103	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020028195	-	987	-	ENSCAFP00020024424	328 (aa)	-	-
ENSCAFT00020028192	-	957	-	ENSCAFP00020024421	318 (aa)	XP_025303324	UPI000DC74E11
ENSCAFT00020028193	-	933	-	ENSCAFP00020024422	310 (aa)	XP_025303325	UPI000DC74588
ENSCAFT00020028191	-	972	-	ENSCAFP00020024420	323 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020019229's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020019229's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020019229	-	90	88.612	ENSG00000205571	SMN2	87	97.500	Homo_sapiens
ENSCAFG00020019229	-	90	88.612	ENSG00000172062	SMN1	95	88.612	Homo_sapiens
ENSCAFG00020019229	-	86	51.625	ENSAPOG00000011324	smn1	94	51.613	Acanthochromis_polyacanthus
ENSCAFG00020019229	-	90	93.929	ENSAMEG00000003316	-	96	94.097	Ailuropoda_melanoleuca
ENSCAFG00020019229	-	83	50.566	ENSACIG00000019772	-	97	50.385	Amphilophus_citrinellus
ENSCAFG00020019229	-	86	51.625	ENSAOCG00000024444	smn1	94	51.613	Amphiprion_ocellaris
ENSCAFG00020019229	-	86	51.986	ENSAPEG00000016504	smn1	94	51.971	Amphiprion_percula
ENSCAFG00020019229	-	93	48.701	ENSATEG00000002182	smn1	90	49.505	Anabas_testudineus
ENSCAFG00020019229	-	64	59.091	ENSAPLG00000010912	-	97	58.586	Anas_platyrhynchos
ENSCAFG00020019229	-	93	54.949	ENSACAG00000010017	-	95	60.432	Anolis_carolinensis
ENSCAFG00020019229	-	93	83.673	ENSANAG00000032133	-	95	85.409	Aotus_nancymaae
ENSCAFG00020019229	-	86	51.273	ENSACLG00000007308	smn1	89	53.333	Astatotilapia_calliptera
ENSCAFG00020019229	-	90	86.833	ENSBTAG00000005743	SMN2	97	86.833	Bos_taurus
ENSCAFG00020019229	-	90	85.816	ENSCJAG00000016290	-	95	85.816	Callithrix_jacchus
ENSCAFG00020019229	-	93	100.000	ENSCAFG00000007812	SMN	99	100.000	Canis_familiaris
ENSCAFG00020019229	-	90	86.926	ENSCHIG00000015559	-	95	86.926	Capra_hircus
ENSCAFG00020019229	-	93	88.502	ENSTSYG00000012058	-	96	89.531	Carlito_syrichta
ENSCAFG00020019229	-	71	69.469	ENSCAPG00000011021	-	100	70.485	Cavia_aperea
ENSCAFG00020019229	-	93	81.507	ENSCPOG00000036973	-	96	82.562	Cavia_porcellus
ENSCAFG00020019229	-	92	81.787	ENSCPOG00000012328	-	97	82.168	Cavia_porcellus
ENSCAFG00020019229	-	90	86.071	ENSCCAG00000018127	-	95	86.071	Cebus_capucinus
ENSCAFG00020019229	-	90	87.544	ENSCATG00000037002	-	95	87.544	Cercocebus_atys
ENSCAFG00020019229	-	93	79.392	ENSCLAG00000000284	-	95	80.919	Chinchilla_lanigera
ENSCAFG00020019229	-	90	87.189	ENSCSAG00000015688	-	95	87.189	Chlorocebus_sabaeus
ENSCAFG00020019229	-	81	78.175	ENSCHOG00000007346	-	100	76.190	Choloepus_hoffmanni
ENSCAFG00020019229	-	93	63.356	ENSCPBG00000010968	-	99	65.299	Chrysemys_picta_bellii
ENSCAFG00020019229	-	89	80.427	ENSCANG00000033324	-	92	82.288	Colobus_angolensis_palliatus
ENSCAFG00020019229	-	90	88.172	ENSCANG00000038242	-	95	88.809	Colobus_angolensis_palliatus
ENSCAFG00020019229	-	93	67.247	ENSCGRG00001016998	-	99	67.944	Cricetulus_griseus_chok1gshd
ENSCAFG00020019229	-	93	85.417	ENSCGRG00001017959	-	99	85.417	Cricetulus_griseus_chok1gshd
ENSCAFG00020019229	-	93	85.417	ENSCGRG00000007698	Smn1	99	85.417	Cricetulus_griseus_crigri
ENSCAFG00020019229	-	87	45.455	ENSCSEG00000015227	smn1	97	50.709	Cynoglossus_semilaevis
ENSCAFG00020019229	-	87	52.190	ENSCVAG00000007498	smn1	95	50.360	Cyprinodon_variegatus
ENSCAFG00020019229	-	90	47.857	ENSDARG00000018494	smn1	98	50.534	Danio_rerio
ENSCAFG00020019229	-	77	87.500	ENSDNOG00000007283	-	99	87.500	Dasypus_novemcinctus
ENSCAFG00020019229	-	74	71.491	ENSDNOG00000045949	-	92	72.146	Dasypus_novemcinctus
ENSCAFG00020019229	-	90	78.571	ENSDORG00000007082	Smn1	94	79.182	Dipodomys_ordii
ENSCAFG00020019229	-	67	72.947	ENSETEG00000001406	-	100	72.947	Echinops_telfairi
ENSCAFG00020019229	-	87	38.333	ENSEBUG00000011902	smn1	95	32.258	Eptatretus_burgeri
ENSCAFG00020019229	-	88	79.710	ENSEASG00005018000	-	91	83.721	Equus_asinus_asinus
ENSCAFG00020019229	-	93	88.966	ENSECAG00000015215	-	99	89.310	Equus_caballus
ENSCAFG00020019229	-	81	81.200	ENSEEUG00000015777	-	100	81.200	Erinaceus_europaeus
ENSCAFG00020019229	-	86	55.797	ENSELUG00000018067	smn1	94	54.122	Esox_lucius
ENSCAFG00020019229	-	93	91.696	ENSFCAG00000028292	SMN	99	91.696	Felis_catus
ENSCAFG00020019229	-	84	63.118	ENSFALG00000012320	-	91	63.118	Ficedula_albicollis
ENSCAFG00020019229	-	93	81.419	ENSFDAG00000017683	-	96	82.456	Fukomys_damarensis
ENSCAFG00020019229	-	58	53.591	ENSFHEG00000018508	smn1	96	51.273	Fundulus_heteroclitus
ENSCAFG00020019229	-	89	49.819	ENSGMOG00000017279	smn1	92	49.091	Gadus_morhua
ENSCAFG00020019229	-	86	61.397	ENSGALG00000002430	SMN	95	61.481	Gallus_gallus
ENSCAFG00020019229	-	86	53.285	ENSGAFG00000009501	smn1	94	52.000	Gambusia_affinis
ENSCAFG00020019229	-	86	53.731	ENSGACG00000010584	smn1	91	52.434	Gasterosteus_aculeatus
ENSCAFG00020019229	-	92	62.414	ENSGAGG00000011374	-	97	63.441	Gopherus_agassizii
ENSCAFG00020019229	-	88	36.765	ENSGAGG00000013639	-	89	38.931	Gopherus_agassizii
ENSCAFG00020019229	-	89	73.913	ENSGGOG00000003872	-	96	78.947	Gorilla_gorilla
ENSCAFG00020019229	-	59	87.500	ENSGGOG00000026704	-	93	86.935	Gorilla_gorilla
ENSCAFG00020019229	-	86	51.661	ENSHBUG00000013987	smn1	94	53.597	Haplochromis_burtoni
ENSCAFG00020019229	-	93	79.038	ENSHGLG00000001905	-	97	80.576	Heterocephalus_glaber_female
ENSCAFG00020019229	-	93	81.757	ENSHGLG00000001018	-	96	82.807	Heterocephalus_glaber_female
ENSCAFG00020019229	-	93	81.757	ENSHGLG00100011252	-	96	82.807	Heterocephalus_glaber_male
ENSCAFG00020019229	-	89	78.571	ENSHGLG00100018676	-	97	80.150	Heterocephalus_glaber_male
ENSCAFG00020019229	-	84	50.000	ENSHCOG00000017136	smn1	88	49.624	Hippocampus_comes
ENSCAFG00020019229	-	88	51.246	ENSIPUG00000012580	smn1	86	52.482	Ictalurus_punctatus
ENSCAFG00020019229	-	85	89.773	ENSSTOG00000012288	-	96	89.474	Ictidomys_tridecemlineatus
ENSCAFG00020019229	-	56	64.943	ENSJJAG00000014853	-	100	65.445	Jaculus_jaculus
ENSCAFG00020019229	-	86	49.827	ENSKMAG00000007239	smn1	96	51.908	Kryptolebias_marmoratus
ENSCAFG00020019229	-	86	52.688	ENSLBEG00000022550	smn1	94	54.412	Labrus_bergylta
ENSCAFG00020019229	-	86	36.268	ENSLACG00000009808	-	90	38.434	Latimeria_chalumnae
ENSCAFG00020019229	-	86	50.923	ENSLOCG00000011339	smn1	94	53.430	Lepisosteus_oculatus
ENSCAFG00020019229	-	93	86.644	ENSLAFG00000003425	-	96	86.644	Loxodonta_africana
ENSCAFG00020019229	-	90	82.918	ENSMFAG00000008812	-	95	83.513	Macaca_fascicularis
ENSCAFG00020019229	-	90	87.900	ENSMFAG00000031523	SMN1	96	87.266	Macaca_fascicularis
ENSCAFG00020019229	-	90	87.900	ENSMMUG00000020214	SMN1	95	87.900	Macaca_mulatta
ENSCAFG00020019229	-	90	82.206	ENSMMUG00000030594	-	95	82.796	Macaca_mulatta
ENSCAFG00020019229	-	90	87.544	ENSMNEG00000035094	-	95	87.687	Macaca_nemestrina
ENSCAFG00020019229	-	71	75.113	ENSMNEG00000036423	-	86	75.113	Macaca_nemestrina
ENSCAFG00020019229	-	90	87.900	ENSMLEG00000041902	-	95	87.900	Mandrillus_leucophaeus
ENSCAFG00020019229	-	91	47.279	ENSMAMG00000011034	smn1	94	50.549	Mastacembelus_armatus
ENSCAFG00020019229	-	86	51.292	ENSMZEG00005013634	smn1	94	53.650	Maylandia_zebra
ENSCAFG00020019229	-	64	57.286	ENSMGAG00000008889	-	95	57.360	Meleagris_gallopavo
ENSCAFG00020019229	-	93	83.681	ENSMAUG00000010262	Smn1	99	83.681	Mesocricetus_auratus
ENSCAFG00020019229	-	90	74.823	ENSMICG00000034708	-	93	88.750	Microcebus_murinus
ENSCAFG00020019229	-	93	83.333	ENSMOCG00000017833	Smn1	99	83.333	Microtus_ochrogaster
ENSCAFG00020019229	-	87	45.455	ENSMMOG00000005504	smn1	96	49.640	Mola_mola
ENSCAFG00020019229	-	91	70.877	ENSMODG00000001436	-	95	72.242	Monodelphis_domestica
ENSCAFG00020019229	-	86	50.549	ENSMALG00000008025	smn1	94	50.357	Monopterus_albus
ENSCAFG00020019229	-	93	83.737	MGP_CAROLIEiJ_G0018836	Smn1	99	84.083	Mus_caroli
ENSCAFG00020019229	-	93	83.737	ENSMUSG00000021645	Smn1	99	84.083	Mus_musculus
ENSCAFG00020019229	-	93	82.230	MGP_PahariEiJ_G0015911	Smn1	99	82.230	Mus_pahari
ENSCAFG00020019229	-	93	83.045	MGP_SPRETEiJ_G0019718	Smn1	99	83.391	Mus_spretus
ENSCAFG00020019229	-	88	94.909	ENSMPUG00000014470	-	98	94.909	Mustela_putorius_furo
ENSCAFG00020019229	-	90	88.194	ENSMLUG00000010603	-	92	88.811	Myotis_lucifugus
ENSCAFG00020019229	-	93	83.391	ENSNGAG00000019833	Smn1	99	83.391	Nannospalax_galili
ENSCAFG00020019229	-	86	53.455	ENSNBRG00000023000	smn1	94	53.791	Neolamprologus_brichardi
ENSCAFG00020019229	-	93	86.986	ENSNLEG00000004454	-	95	87.900	Nomascus_leucogenys
ENSCAFG00020019229	-	73	65.044	ENSMEUG00000011393	-	99	68.122	Notamacropus_eugenii
ENSCAFG00020019229	-	81	80.632	ENSOPRG00000002015	-	100	82.213	Ochotona_princeps
ENSCAFG00020019229	-	88	81.818	ENSODEG00000015976	-	97	81.818	Octodon_degus
ENSCAFG00020019229	-	87	53.069	ENSONIG00000011799	smn1	95	53.405	Oreochromis_niloticus
ENSCAFG00020019229	-	93	63.322	ENSOANG00000001626	-	97	66.667	Ornithorhynchus_anatinus
ENSCAFG00020019229	-	93	78.912	ENSOCUG00000025183	-	96	80.212	Oryctolagus_cuniculus
ENSCAFG00020019229	-	93	86.505	ENSOCUG00000017097	-	95	87.050	Oryctolagus_cuniculus
ENSCAFG00020019229	-	93	81.356	ENSOCUG00000026649	-	96	84.859	Oryctolagus_cuniculus
ENSCAFG00020019229	-	50	60.256	ENSORLG00000010552	smn1	94	51.971	Oryzias_latipes
ENSCAFG00020019229	-	86	52.985	ENSORLG00020007936	smn1	93	51.111	Oryzias_latipes_hni
ENSCAFG00020019229	-	50	59.615	ENSORLG00015022425	smn1	94	51.254	Oryzias_latipes_hsok
ENSCAFG00020019229	-	86	53.986	ENSOMEG00000007824	smn1	94	54.579	Oryzias_melastigma
ENSCAFG00020019229	-	86	76.838	ENSOGAG00000031414	-	94	76.838	Otolemur_garnettii
ENSCAFG00020019229	-	88	84.672	ENSOARG00000005425	-	99	84.672	Ovis_aries
ENSCAFG00020019229	-	90	88.256	ENSPPAG00000036640	-	95	88.256	Pan_paniscus
ENSCAFG00020019229	-	93	92.042	ENSPPRG00000005575	-	99	92.042	Panthera_pardus
ENSCAFG00020019229	-	93	91.724	ENSPTIG00000007745	-	99	91.724	Panthera_tigris_altaica
ENSCAFG00020019229	-	90	87.676	ENSPTRG00000016955	-	95	87.676	Pan_troglodytes
ENSCAFG00020019229	-	93	86.986	ENSPANG00000013601	-	95	87.900	Papio_anubis
ENSCAFG00020019229	-	89	82.734	ENSPANG00000000253	-	93	83.696	Papio_anubis
ENSCAFG00020019229	-	86	51.799	ENSPKIG00000011096	smn1	94	52.060	Paramormyrops_kingsleyae
ENSCAFG00020019229	-	87	60.777	ENSPSIG00000014787	-	90	58.007	Pelodiscus_sinensis
ENSCAFG00020019229	-	86	49.458	ENSPMGG00000012285	smn1	94	49.621	Periophthalmus_magnuspinnatus
ENSCAFG00020019229	-	90	40.830	ENSPMAG00000005004	smn1	91	41.971	Petromyzon_marinus
ENSCAFG00020019229	-	91	70.526	ENSPCIG00000025764	-	96	71.886	Phascolarctos_cinereus
ENSCAFG00020019229	-	86	53.846	ENSPFOG00000007786	smn1	94	53.480	Poecilia_formosa
ENSCAFG00020019229	-	86	54.212	ENSPLAG00000012071	smn1	94	53.846	Poecilia_latipinna
ENSCAFG00020019229	-	86	53.846	ENSPMEG00000017085	smn1	94	53.480	Poecilia_mexicana
ENSCAFG00020019229	-	86	54.745	ENSPREG00000005824	smn1	94	54.212	Poecilia_reticulata
ENSCAFG00020019229	-	85	87.640	ENSPPYG00000015533	-	96	87.640	Pongo_abelii
ENSCAFG00020019229	-	80	55.823	ENSPPYG00000019189	-	99	55.020	Pongo_abelii
ENSCAFG00020019229	-	85	84.387	ENSPCAG00000004187	-	99	84.387	Procavia_capensis
ENSCAFG00020019229	-	83	68.441	ENSPCOG00000022307	-	90	83.251	Propithecus_coquereli
ENSCAFG00020019229	-	90	93.190	ENSPVAG00000005977	-	96	92.857	Pteropus_vampyrus
ENSCAFG00020019229	-	86	53.455	ENSPNYG00000014148	smn1	94	53.791	Pundamilia_nyererei
ENSCAFG00020019229	-	87	50.365	ENSPNAG00000014007	smn1	83	48.929	Pygocentrus_nattereri
ENSCAFG00020019229	-	93	80.969	ENSRNOG00000018067	Smn1	99	80.969	Rattus_norvegicus
ENSCAFG00020019229	-	90	87.544	ENSRBIG00000037052	-	95	88.172	Rhinopithecus_bieti
ENSCAFG00020019229	-	87	74.170	ENSRBIG00000036775	-	91	75.185	Rhinopithecus_bieti
ENSCAFG00020019229	-	90	87.544	ENSRROG00000039399	-	95	88.172	Rhinopithecus_roxellana
ENSCAFG00020019229	-	91	72.632	ENSRROG00000031088	-	95	73.050	Rhinopithecus_roxellana
ENSCAFG00020019229	-	78	78.884	ENSSBOG00000020112	-	87	79.283	Saimiri_boliviensis_boliviensis
ENSCAFG00020019229	-	90	85.305	ENSSBOG00000011665	-	95	85.305	Saimiri_boliviensis_boliviensis
ENSCAFG00020019229	-	93	70.103	ENSSHAG00000001499	-	97	72.015	Sarcophilus_harrisii
ENSCAFG00020019229	-	86	50.549	ENSSFOG00015015507	smn1	94	51.493	Scleropages_formosus
ENSCAFG00020019229	-	86	50.368	ENSSMAG00000007922	smn1	94	52.000	Scophthalmus_maximus
ENSCAFG00020019229	-	86	51.079	ENSSDUG00000018533	smn1	94	50.714	Seriola_dumerili
ENSCAFG00020019229	-	86	51.079	ENSSLDG00000021135	smn1	94	50.714	Seriola_lalandi_dorsalis
ENSCAFG00020019229	-	91	63.158	ENSSPUG00000000373	-	93	66.418	Sphenodon_punctatus
ENSCAFG00020019229	-	86	51.812	ENSSPAG00000004345	smn1	94	50.355	Stegastes_partitus
ENSCAFG00020019229	-	68	60.849	ENSSSCG00000033865	-	95	61.395	Sus_scrofa
ENSCAFG00020019229	-	90	67.857	ENSSSCG00000029127	-	94	67.857	Sus_scrofa
ENSCAFG00020019229	-	90	91.103	ENSSSCG00000016970	-	96	91.103	Sus_scrofa
ENSCAFG00020019229	-	88	60.432	ENSTGUG00000001548	-	96	59.124	Taeniopygia_guttata
ENSCAFG00020019229	-	87	47.584	ENSTRUG00000000736	smn	95	48.375	Takifugu_rubripes
ENSCAFG00020019229	-	87	48.043	ENSTNIG00000009892	smn1	95	48.227	Tetraodon_nigroviridis
ENSCAFG00020019229	-	62	86.979	ENSTBEG00000002399	-	100	87.440	Tupaia_belangeri
ENSCAFG00020019229	-	90	85.714	ENSTTRG00000005080	-	95	86.786	Tursiops_truncatus
ENSCAFG00020019229	-	59	93.478	ENSUAMG00000024947	-	77	92.488	Ursus_americanus
ENSCAFG00020019229	-	90	94.643	ENSUMAG00000007842	-	74	94.792	Ursus_maritimus
ENSCAFG00020019229	-	86	77.068	ENSVPAG00000009887	-	96	77.068	Vicugna_pacos
ENSCAFG00020019229	-	98	99.686	ENSVVUG00000006934	-	100	99.686	Vulpes_vulpes
ENSCAFG00020019229	-	88	54.093	ENSXETG00000018189	smn2	95	54.737	Xenopus_tropicalis
ENSCAFG00020019229	-	85	36.232	ENSXETG00000004912	-	78	59.016	Xenopus_tropicalis
ENSCAFG00020019229	-	87	53.025	ENSXMAG00000001521	smn1	95	51.825	Xiphophorus_maculatus