EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020019269 (Gene tree)
Gene ID: 112678876
Gene Symbol: ZC3H13
Alias: DKFZp434D1812|KIAA0853|Xio
Full Name: zinc finger CCCH-type containing 13
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 84210 bases
Position: chrQKWQ01000023.1:19243894-19328103
Accession: 112678876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020024580	zf-CCCH	PF00642.24	1.6e-07	1	1
ENSCAFP00020024578	zf-CCCH	PF00642.24	8e-07	1	1
ENSCAFP00020024570	zf-CCCH	PF00642.24	8.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020028357	ZC3H13-201	4980	-	ENSCAFP00020024570	1659 (aa)	XP_025334061	UPI000DC6CB9F
ENSCAFT00020028365	ZC3H13-202	4872	-	ENSCAFP00020024578	1623 (aa)	-	-
ENSCAFT00020028367	ZC3H13-203	1284	-	ENSCAFP00020024580	427 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020019269's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020019269's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020019269	ZC3H13	99	96.445	ENSG00000123200	ZC3H13	98	99.115	Homo_sapiens
ENSCAFG00020019269	ZC3H13	98	99.284	ENSAMEG00000013117	ZC3H13	100	96.815	Ailuropoda_melanoleuca
ENSCAFG00020019269	ZC3H13	100	99.759	ENSCAFG00000004511	ZC3H13	100	99.759	Canis_familiaris
ENSCAFG00020019269	ZC3H13	96	94.175	ENSCLAG00000000610	ZC3H13	53	84.862	Chinchilla_lanigera
ENSCAFG00020019269	ZC3H13	84	95.575	ENSCHOG00000009724	ZC3H13	87	95.575	Choloepus_hoffmanni
ENSCAFG00020019269	ZC3H13	98	91.408	ENSCGRG00001014490	Zc3h13	50	80.678	Cricetulus_griseus_chok1gshd
ENSCAFG00020019269	ZC3H13	96	91.748	ENSDORG00000000600	Zc3h13	53	85.371	Dipodomys_ordii
ENSCAFG00020019269	ZC3H13	96	96.359	ENSECAG00000022843	ZC3H13	54	91.972	Equus_caballus
ENSCAFG00020019269	ZC3H13	98	98.807	ENSFCAG00000004877	ZC3H13	52	92.890	Felis_catus
ENSCAFG00020019269	ZC3H13	81	60.907	ENSGACG00000015166	zc3h13	57	55.357	Gasterosteus_aculeatus
ENSCAFG00020019269	ZC3H13	99	92.180	ENSJJAG00000019971	Zc3h13	53	83.716	Jaculus_jaculus
ENSCAFG00020019269	ZC3H13	69	64.875	ENSKMAG00000010701	zc3h13	58	57.576	Kryptolebias_marmoratus
ENSCAFG00020019269	ZC3H13	99	74.118	ENSLACG00000003806	ZC3H13	57	62.235	Latimeria_chalumnae
ENSCAFG00020019269	ZC3H13	96	95.388	ENSMICG00000014772	ZC3H13	53	86.493	Microcebus_murinus
ENSCAFG00020019269	ZC3H13	96	91.019	MGP_CAROLIEiJ_G0019512	Zc3h13	50	82.991	Mus_caroli
ENSCAFG00020019269	ZC3H13	96	91.262	ENSMUSG00000022000	Zc3h13	50	82.877	Mus_musculus
ENSCAFG00020019269	ZC3H13	96	91.262	MGP_PahariEiJ_G0030530	Zc3h13	50	82.534	Mus_pahari
ENSCAFG00020019269	ZC3H13	96	91.019	MGP_SPRETEiJ_G0020407	Zc3h13	51	82.763	Mus_spretus
ENSCAFG00020019269	ZC3H13	98	98.807	ENSMPUG00000001602	ZC3H13	100	94.734	Mustela_putorius_furo
ENSCAFG00020019269	ZC3H13	96	93.204	ENSODEG00000005178	ZC3H13	53	84.289	Octodon_degus
ENSCAFG00020019269	ZC3H13	99	92.417	ENSOCUG00000015173	ZC3H13	53	87.385	Oryctolagus_cuniculus
ENSCAFG00020019269	ZC3H13	96	95.146	ENSOGAG00000012032	ZC3H13	52	87.615	Otolemur_garnettii
ENSCAFG00020019269	ZC3H13	98	92.363	ENSPTIG00000014867	ZC3H13	53	91.284	Panthera_tigris_altaica
ENSCAFG00020019269	ZC3H13	98	70.650	ENSPSIG00000012518	ZC3H13	99	75.926	Pelodiscus_sinensis
ENSCAFG00020019269	ZC3H13	98	91.667	ENSPEMG00000021979	-	99	90.476	Peromyscus_maniculatus_bairdii
ENSCAFG00020019269	ZC3H13	82	97.590	ENSPCAG00000001146	ZC3H13	77	93.574	Procavia_capensis
ENSCAFG00020019269	ZC3H13	98	83.771	ENSPVAG00000012353	ZC3H13	69	85.276	Pteropus_vampyrus
ENSCAFG00020019269	ZC3H13	96	89.563	ENSRNOG00000011237	Zc3h13	50	82.460	Rattus_norvegicus
ENSCAFG00020019269	ZC3H13	98	57.079	ENSSDUG00000021808	zc3h13	91	57.650	Seriola_dumerili
ENSCAFG00020019269	ZC3H13	96	95.146	ENSSARG00000007106	ZC3H13	50	93.405	Sorex_araneus
ENSCAFG00020019269	ZC3H13	98	98.807	ENSUMAG00000016220	ZC3H13	100	95.427	Ursus_maritimus
ENSCAFG00020019269	ZC3H13	96	87.621	ENSVPAG00000005179	ZC3H13	84	90.000	Vicugna_pacos
ENSCAFG00020019269	ZC3H13	100	99.216	ENSVVUG00000028395	ZC3H13	100	99.216	Vulpes_vulpes
ENSCAFG00020019269	ZC3H13	99	75.943	ENSXETG00000014637	zc3h13	97	61.592	Xenopus_tropicalis