EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020019387 (Gene tree)
Gene ID: 112641261
Gene Symbol: VARS2
Alias: DKFZP434L1435|G7a|KIAA1885|VARS2L|VARSL
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 11693 bases
Position: chrQKWQ01001619.1:678351-690043
Accession: 21642
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020024823	tRNA-synt_1g	PF09334.11	1e-14	1	1
ENSCAFP00020024848	tRNA-synt_1g	PF09334.11	1e-14	1	1
ENSCAFP00020024867	tRNA-synt_1g	PF09334.11	1.4e-14	1	1
ENSCAFP00020024867	Anticodon_1	PF08264.13	6.2e-32	1	1
ENSCAFP00020024823	Anticodon_1	PF08264.13	7e-32	1	1
ENSCAFP00020024848	Anticodon_1	PF08264.13	4.3e-26	1	1
ENSCAFP00020024823	tRNA-synt_1	PF00133.22	1.1e-186	1	1
ENSCAFP00020024848	tRNA-synt_1	PF00133.22	5.2e-185	1	1
ENSCAFP00020024867	tRNA-synt_1	PF00133.22	2.2e-178	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020028690	VARS2-203	2823	-	ENSCAFP00020024867	940 (aa)	-	-
ENSCAFT00020028671	VARS2-202	2985	-	ENSCAFP00020024848	994 (aa)	-	-
ENSCAFT00020028641	VARS2-201	2962	-	ENSCAFP00020024823	982 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020019387's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020019387's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020019387	VARS2	88	53.256	ENSCAFG00020020790	VARS	74	52.079

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020019387	VARS2	89	56.372	ENSAPOG00000007396	vars2	86	54.650	Acanthochromis_polyacanthus
ENSCAFG00020019387	VARS2	96	89.904	ENSAMEG00000012997	VARS2	86	89.872	Ailuropoda_melanoleuca
ENSCAFG00020019387	VARS2	93	57.112	ENSACIG00000004344	vars2	86	57.127	Amphilophus_citrinellus
ENSCAFG00020019387	VARS2	89	56.028	ENSAOCG00000000476	vars2	86	54.787	Amphiprion_ocellaris
ENSCAFG00020019387	VARS2	89	55.798	ENSAPEG00000008646	vars2	85	54.023	Amphiprion_percula
ENSCAFG00020019387	VARS2	89	57.326	ENSATEG00000012291	vars2	84	56.984	Anabas_testudineus
ENSCAFG00020019387	VARS2	90	63.667	ENSACAG00000022093	VARS2	82	63.586	Anolis_carolinensis
ENSCAFG00020019387	VARS2	95	85.484	ENSANAG00000038018	VARS2	87	85.437	Aotus_nancymaae
ENSCAFG00020019387	VARS2	93	55.901	ENSACLG00000018673	vars2	86	55.914	Astatotilapia_calliptera
ENSCAFG00020019387	VARS2	92	58.624	ENSAMXG00000017773	vars2	88	58.306	Astyanax_mexicanus
ENSCAFG00020019387	VARS2	95	87.944	ENSBTAG00000010698	VARS2	87	87.905	Bos_taurus
ENSCAFG00020019387	VARS2	95	85.684	ENSCJAG00000019826	VARS2	87	85.637	Callithrix_jacchus
ENSCAFG00020019387	VARS2	95	100.000	ENSCAFG00000000454	VARS2	87	100.000	Canis_familiaris
ENSCAFG00020019387	VARS2	95	87.298	ENSCHIG00000007847	VARS2	87	87.257	Capra_hircus
ENSCAFG00020019387	VARS2	95	85.468	ENSTSYG00000009904	VARS2	87	85.421	Carlito_syrichta
ENSCAFG00020019387	VARS2	82	83.791	ENSCAPG00000017770	VARS2	92	79.371	Cavia_aperea
ENSCAFG00020019387	VARS2	95	81.750	ENSCPOG00000021834	VARS2	87	81.701	Cavia_porcellus
ENSCAFG00020019387	VARS2	95	85.899	ENSCCAG00000037907	VARS2	95	84.118	Cebus_capucinus
ENSCAFG00020019387	VARS2	95	86.114	ENSCATG00000032554	VARS2	87	86.069	Cercocebus_atys
ENSCAFG00020019387	VARS2	95	82.403	ENSCLAG00000002889	VARS2	87	82.454	Chinchilla_lanigera
ENSCAFG00020019387	VARS2	95	86.006	ENSCSAG00000008327	VARS2	87	85.961	Chlorocebus_sabaeus
ENSCAFG00020019387	VARS2	89	66.000	ENSCPBG00000021502	VARS2	97	59.651	Chrysemys_picta_bellii
ENSCAFG00020019387	VARS2	95	85.912	ENSCANG00000014991	VARS2	87	85.867	Colobus_angolensis_palliatus
ENSCAFG00020019387	VARS2	93	83.297	ENSCGRG00001021535	Vars2	87	82.721	Cricetulus_griseus_chok1gshd
ENSCAFG00020019387	VARS2	93	83.297	ENSCGRG00000014112	Vars2	87	82.721	Cricetulus_griseus_crigri
ENSCAFG00020019387	VARS2	84	61.069	ENSCSEG00000015432	vars2	79	61.069	Cynoglossus_semilaevis
ENSCAFG00020019387	VARS2	64	56.270	ENSCVAG00000017765	vars2	88	56.378	Cyprinodon_variegatus
ENSCAFG00020019387	VARS2	91	57.539	ENSDARG00000056717	vars2	84	57.620	Danio_rerio
ENSCAFG00020019387	VARS2	72	86.441	ENSDORG00000008516	Vars2	85	81.438	Dipodomys_ordii
ENSCAFG00020019387	VARS2	95	74.919	ENSETEG00000014844	VARS2	87	74.838	Echinops_telfairi
ENSCAFG00020019387	VARS2	95	87.687	ENSEASG00005019997	VARS2	97	84.392	Equus_asinus_asinus
ENSCAFG00020019387	VARS2	95	89.236	ENSECAG00000018202	VARS2	87	89.201	Equus_caballus
ENSCAFG00020019387	VARS2	57	82.524	ENSEEUG00000012591	-	57	82.524	Erinaceus_europaeus
ENSCAFG00020019387	VARS2	90	56.787	ENSELUG00000017824	vars2	87	53.403	Esox_lucius
ENSCAFG00020019387	VARS2	95	90.097	ENSFCAG00000010531	VARS2	87	90.065	Felis_catus
ENSCAFG00020019387	VARS2	95	82.151	ENSFDAG00000017216	VARS2	87	82.093	Fukomys_damarensis
ENSCAFG00020019387	VARS2	89	53.521	ENSFHEG00000013932	vars2	90	51.944	Fundulus_heteroclitus
ENSCAFG00020019387	VARS2	89	58.480	ENSGMOG00000018960	vars2	88	59.555	Gadus_morhua
ENSCAFG00020019387	VARS2	69	55.316	ENSGAFG00000004737	vars2	74	55.491	Gambusia_affinis
ENSCAFG00020019387	VARS2	89	58.382	ENSGACG00000001464	vars2	86	59.342	Gasterosteus_aculeatus
ENSCAFG00020019387	VARS2	86	65.150	ENSGAGG00000011652	VARS2	91	62.403	Gopherus_agassizii
ENSCAFG00020019387	VARS2	95	85.899	ENSGGOG00000014587	VARS2	87	85.853	Gorilla_gorilla
ENSCAFG00020019387	VARS2	94	53.985	ENSHBUG00000002448	vars2	86	54.360	Haplochromis_burtoni
ENSCAFG00020019387	VARS2	95	81.023	ENSHGLG00000012886	VARS2	85	80.963	Heterocephalus_glaber_female
ENSCAFG00020019387	VARS2	95	80.860	ENSHGLG00100016535	VARS2	87	80.798	Heterocephalus_glaber_male
ENSCAFG00020019387	VARS2	62	56.905	ENSHCOG00000017907	vars2	81	57.496	Hippocampus_comes
ENSCAFG00020019387	VARS2	89	59.441	ENSIPUG00000015573	Vars2	85	57.582	Ictalurus_punctatus
ENSCAFG00020019387	VARS2	95	86.006	ENSSTOG00000009924	VARS2	87	85.961	Ictidomys_tridecemlineatus
ENSCAFG00020019387	VARS2	95	82.562	ENSJJAG00000011144	Vars2	87	82.613	Jaculus_jaculus
ENSCAFG00020019387	VARS2	89	56.811	ENSKMAG00000001393	vars2	84	56.769	Kryptolebias_marmoratus
ENSCAFG00020019387	VARS2	90	56.416	ENSLBEG00000011949	vars2	83	55.943	Labrus_bergylta
ENSCAFG00020019387	VARS2	56	64.324	ENSLBEG00000005480	-	82	63.784	Labrus_bergylta
ENSCAFG00020019387	VARS2	90	56.125	ENSLACG00000001576	-	94	51.837	Latimeria_chalumnae
ENSCAFG00020019387	VARS2	94	85.730	ENSLAFG00000015183	VARS2	87	85.683	Loxodonta_africana
ENSCAFG00020019387	VARS2	95	85.468	ENSMFAG00000042367	VARS2	87	85.421	Macaca_fascicularis
ENSCAFG00020019387	VARS2	95	85.576	ENSMMUG00000018609	VARS2	87	85.529	Macaca_mulatta
ENSCAFG00020019387	VARS2	95	86.006	ENSMNEG00000043163	VARS2	87	85.961	Macaca_nemestrina
ENSCAFG00020019387	VARS2	95	86.019	ENSMLEG00000041728	VARS2	85	85.974	Mandrillus_leucophaeus
ENSCAFG00020019387	VARS2	90	55.902	ENSMAMG00000020339	vars2	84	55.229	Mastacembelus_armatus
ENSCAFG00020019387	VARS2	93	55.794	ENSMZEG00005017669	vars2	86	55.806	Maylandia_zebra
ENSCAFG00020019387	VARS2	95	83.100	ENSMAUG00000018946	Vars2	87	83.045	Mesocricetus_auratus
ENSCAFG00020019387	VARS2	91	85.538	ENSMICG00000005365	VARS2	100	85.538	Microcebus_murinus
ENSCAFG00020019387	VARS2	88	83.879	ENSMOCG00000014607	Vars2	86	83.879	Microtus_ochrogaster
ENSCAFG00020019387	VARS2	89	56.709	ENSMMOG00000012122	vars2	86	55.508	Mola_mola
ENSCAFG00020019387	VARS2	95	77.170	ENSMODG00000015848	VARS2	86	77.204	Monodelphis_domestica
ENSCAFG00020019387	VARS2	89	57.360	ENSMALG00000009217	vars2	89	54.961	Monopterus_albus
ENSCAFG00020019387	VARS2	95	83.208	MGP_CAROLIEiJ_G0021529	Vars2	94	84.530	Mus_caroli
ENSCAFG00020019387	VARS2	95	83.208	ENSMUSG00000038838	Vars2	93	84.288	Mus_musculus
ENSCAFG00020019387	VARS2	95	83.746	MGP_PahariEiJ_G0020523	Vars2	95	83.848	Mus_pahari
ENSCAFG00020019387	VARS2	95	83.208	MGP_SPRETEiJ_G0022436	Vars2	94	83.978	Mus_spretus
ENSCAFG00020019387	VARS2	95	90.205	ENSMPUG00000011643	VARS2	87	90.173	Mustela_putorius_furo
ENSCAFG00020019387	VARS2	96	85.410	ENSMLUG00000002356	VARS2	85	85.363	Myotis_lucifugus
ENSCAFG00020019387	VARS2	93	76.881	ENSNGAG00000020607	Vars2	87	76.073	Nannospalax_galili
ENSCAFG00020019387	VARS2	95	83.351	ENSNLEG00000005625	VARS2	86	83.298	Nomascus_leucogenys
ENSCAFG00020019387	VARS2	74	74.915	ENSMEUG00000014475	VARS2	82	74.915	Notamacropus_eugenii
ENSCAFG00020019387	VARS2	84	80.840	ENSOPRG00000000682	VARS2	77	82.390	Ochotona_princeps
ENSCAFG00020019387	VARS2	95	81.525	ENSODEG00000017965	VARS2	87	81.466	Octodon_degus
ENSCAFG00020019387	VARS2	87	41.309	ENSONIG00000004734	vars2	86	41.263	Oreochromis_niloticus
ENSCAFG00020019387	VARS2	70	88.235	ENSOANG00000000398	-	89	88.235	Ornithorhynchus_anatinus
ENSCAFG00020019387	VARS2	95	78.466	ENSOCUG00000021496	VARS2	56	78.549	Oryctolagus_cuniculus
ENSCAFG00020019387	VARS2	90	56.818	ENSORLG00000010632	vars2	85	56.317	Oryzias_latipes
ENSCAFG00020019387	VARS2	89	56.865	ENSORLG00020018584	vars2	85	56.103	Oryzias_latipes_hni
ENSCAFG00020019387	VARS2	89	56.472	ENSORLG00015010408	vars2	83	56.354	Oryzias_latipes_hsok
ENSCAFG00020019387	VARS2	90	56.670	ENSOMEG00000008360	vars2	85	56.156	Oryzias_melastigma
ENSCAFG00020019387	VARS2	95	86.019	ENSOGAG00000006087	VARS2	85	86.081	Otolemur_garnettii
ENSCAFG00020019387	VARS2	95	86.004	ENSOARG00000010844	VARS2	86	85.959	Ovis_aries
ENSCAFG00020019387	VARS2	95	86.006	ENSPPAG00000041141	VARS2	87	85.961	Pan_paniscus
ENSCAFG00020019387	VARS2	96	89.267	ENSPPRG00000006751	VARS2	86	89.232	Panthera_pardus
ENSCAFG00020019387	VARS2	96	89.160	ENSPTIG00000017799	VARS2	91	86.486	Panthera_tigris_altaica
ENSCAFG00020019387	VARS2	95	86.006	ENSPTRG00000034497	VARS2	87	85.961	Pan_troglodytes
ENSCAFG00020019387	VARS2	95	86.329	ENSPANG00000018481	VARS2	90	86.285	Papio_anubis
ENSCAFG00020019387	VARS2	90	58.896	ENSPKIG00000011372	vars2	87	57.495	Paramormyrops_kingsleyae
ENSCAFG00020019387	VARS2	64	68.146	ENSPSIG00000006206	VARS2	92	67.593	Pelodiscus_sinensis
ENSCAFG00020019387	VARS2	92	57.814	ENSPMGG00000000465	vars2	84	57.785	Periophthalmus_magnuspinnatus
ENSCAFG00020019387	VARS2	95	83.423	ENSPEMG00000014691	Vars2	87	83.369	Peromyscus_maniculatus_bairdii
ENSCAFG00020019387	VARS2	94	78.463	ENSPCIG00000015040	VARS2	87	78.393	Phascolarctos_cinereus
ENSCAFG00020019387	VARS2	89	57.126	ENSPFOG00000017616	vars2	84	56.167	Poecilia_formosa
ENSCAFG00020019387	VARS2	89	56.697	ENSPLAG00000019778	vars2	86	54.866	Poecilia_latipinna
ENSCAFG00020019387	VARS2	89	56.747	ENSPMEG00000011123	vars2	84	55.837	Poecilia_mexicana
ENSCAFG00020019387	VARS2	89	50.000	ENSPREG00000014998	vars2	86	48.966	Poecilia_reticulata
ENSCAFG00020019387	VARS2	95	86.114	ENSPPYG00000016424	VARS2	87	86.069	Pongo_abelii
ENSCAFG00020019387	VARS2	77	86.486	ENSPCAG00000006946	VARS2	72	85.294	Procavia_capensis
ENSCAFG00020019387	VARS2	95	84.665	ENSPCOG00000014839	VARS2	85	84.615	Propithecus_coquereli
ENSCAFG00020019387	VARS2	95	86.222	ENSPVAG00000004197	VARS2	87	86.177	Pteropus_vampyrus
ENSCAFG00020019387	VARS2	77	60.054	ENSPNYG00000010314	vars2	84	60.054	Pundamilia_nyererei
ENSCAFG00020019387	VARS2	90	59.000	ENSPNAG00000026793	vars2	82	59.086	Pygocentrus_nattereri
ENSCAFG00020019387	VARS2	95	83.190	ENSRNOG00000000833	Vars2	87	83.153	Rattus_norvegicus
ENSCAFG00020019387	VARS2	95	85.791	ENSRBIG00000032725	VARS2	87	85.745	Rhinopithecus_bieti
ENSCAFG00020019387	VARS2	95	85.791	ENSRROG00000043847	VARS2	87	85.745	Rhinopithecus_roxellana
ENSCAFG00020019387	VARS2	95	83.107	ENSSBOG00000033240	VARS2	86	83.054	Saimiri_boliviensis_boliviensis
ENSCAFG00020019387	VARS2	94	77.056	ENSSHAG00000009307	VARS2	87	76.982	Sarcophilus_harrisii
ENSCAFG00020019387	VARS2	91	57.819	ENSSFOG00015016187	vars2	85	57.174	Scleropages_formosus
ENSCAFG00020019387	VARS2	89	58.188	ENSSMAG00000020842	vars2	87	55.124	Scophthalmus_maximus
ENSCAFG00020019387	VARS2	90	57.143	ENSSDUG00000011598	vars2	84	56.940	Seriola_dumerili
ENSCAFG00020019387	VARS2	86	58.293	ENSSLDG00000015492	vars2	83	56.430	Seriola_lalandi_dorsalis
ENSCAFG00020019387	VARS2	55	86.131	ENSSARG00000003786	-	61	86.131	Sorex_araneus
ENSCAFG00020019387	VARS2	87	64.329	ENSSPUG00000014700	VARS2	88	64.329	Sphenodon_punctatus
ENSCAFG00020019387	VARS2	89	54.767	ENSSPAG00000004654	vars2	83	54.093	Stegastes_partitus
ENSCAFG00020019387	VARS2	95	87.729	ENSSSCG00000001384	VARS2	93	87.689	Sus_scrofa
ENSCAFG00020019387	VARS2	89	58.762	ENSTRUG00000005264	vars2	87	57.220	Takifugu_rubripes
ENSCAFG00020019387	VARS2	90	57.432	ENSTNIG00000005916	vars2	83	57.127	Tetraodon_nigroviridis
ENSCAFG00020019387	VARS2	95	75.565	ENSTTRG00000012243	VARS2	89	75.486	Tursiops_truncatus
ENSCAFG00020019387	VARS2	96	90.234	ENSUAMG00000026124	VARS2	92	87.412	Ursus_americanus
ENSCAFG00020019387	VARS2	95	91.066	ENSUMAG00000019894	VARS2	87	91.037	Ursus_maritimus
ENSCAFG00020019387	VARS2	96	97.881	ENSVVUG00000010754	VARS2	85	97.881	Vulpes_vulpes
ENSCAFG00020019387	VARS2	89	57.375	ENSXETG00000003036	vars2	96	54.565	Xenopus_tropicalis
ENSCAFG00020019387	VARS2	89	56.943	ENSXCOG00000003455	vars2	86	56.236	Xiphophorus_couchianus
ENSCAFG00020019387	VARS2	89	56.372	ENSXMAG00000013523	vars2	84	55.714	Xiphophorus_maculatus