EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020019472 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 157337 bases
Position: chrQKWQ01000396.1:3503486-3660822
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020024763	KH_1	PF00013.29	5.8e-37	1	2
ENSCAFP00020024763	KH_1	PF00013.29	5.8e-37	2	2
ENSCAFP00020024764	KH_1	PF00013.29	5.8e-37	1	2
ENSCAFP00020024764	KH_1	PF00013.29	5.8e-37	2	2
ENSCAFP00020024767	KH_1	PF00013.29	5.8e-37	1	2
ENSCAFP00020024767	KH_1	PF00013.29	5.8e-37	2	2
ENSCAFP00020024772	KH_1	PF00013.29	4.6e-31	1	2
ENSCAFP00020024772	KH_1	PF00013.29	4.6e-31	2	2
ENSCAFP00020024763	KH_2	PF07650.17	1e-11	1	1
ENSCAFP00020024764	KH_2	PF07650.17	1e-11	1	1
ENSCAFP00020024767	KH_2	PF07650.17	1e-11	1	1
ENSCAFP00020024772	KH_2	PF07650.17	2.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020028583	-	852	-	ENSCAFP00020024772	283 (aa)	-	-
ENSCAFT00020028573	-	1011	-	ENSCAFP00020024763	281 (aa)	-	-
ENSCAFT00020028574	-	995	-	ENSCAFP00020024764	281 (aa)	-	-
ENSCAFT00020028577	-	1013	-	ENSCAFP00020024767	281 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020019472's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020019472's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020019472	-	83	74.897	ENSCAFG00020020983	-	73	74.897
ENSCAFG00020019472	-	63	41.667	ENSCAFG00020023808	-	59	41.667
ENSCAFG00020019472	-	56	33.813	ENSCAFG00020002709	IGF2BP3	59	33.813
ENSCAFG00020019472	-	58	30.667	ENSCAFG00020024002	FUBP3	65	30.667
ENSCAFG00020019472	-	65	38.333	ENSCAFG00020007945	-	53	38.333
ENSCAFG00020019472	-	76	66.667	ENSCAFG00020022361	PCBP4	53	66.667
ENSCAFG00020019472	-	60	36.567	ENSCAFG00020005444	IGF2BP2	54	36.567
ENSCAFG00020019472	-	95	58.741	ENSCAFG00020004084	-	84	69.057

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020019472	-	81	97.380	ENSAPOG00000016582	-	89	97.380	Acanthochromis_polyacanthus
ENSCAFG00020019472	-	81	93.013	ENSAPOG00000020003	pcbp3	79	93.013	Acanthochromis_polyacanthus
ENSCAFG00020019472	-	97	98.162	ENSAMEG00000001697	-	91	98.162	Ailuropoda_melanoleuca
ENSCAFG00020019472	-	84	85.232	ENSACIG00000010933	pcbp3	93	92.670	Amphilophus_citrinellus
ENSCAFG00020019472	-	81	90.678	ENSACIG00000002739	-	90	90.678	Amphilophus_citrinellus
ENSCAFG00020019472	-	80	96.482	ENSAOCG00000007806	-	92	96.482	Amphiprion_ocellaris
ENSCAFG00020019472	-	81	96.507	ENSAOCG00000008592	-	95	96.507	Amphiprion_ocellaris
ENSCAFG00020019472	-	81	94.760	ENSAPEG00000005209	-	90	94.760	Amphiprion_percula
ENSCAFG00020019472	-	81	87.302	ENSAPEG00000008011	pcbp3	88	87.302	Amphiprion_percula
ENSCAFG00020019472	-	77	89.862	ENSATEG00000015787	-	92	84.524	Anabas_testudineus
ENSCAFG00020019472	-	81	93.886	ENSATEG00000009833	-	90	93.886	Anabas_testudineus
ENSCAFG00020019472	-	78	82.805	ENSAPLG00000008951	-	77	75.801	Anas_platyrhynchos
ENSCAFG00020019472	-	83	98.283	ENSAPLG00000002975	-	88	98.283	Anas_platyrhynchos
ENSCAFG00020019472	-	83	89.494	ENSACAG00000004607	-	94	89.494	Anolis_carolinensis
ENSCAFG00020019472	-	83	82.812	ENSACAG00000009819	-	92	82.812	Anolis_carolinensis
ENSCAFG00020019472	-	79	100.000	ENSANAG00000030702	-	90	100.000	Aotus_nancymaae
ENSCAFG00020019472	-	81	86.905	ENSACLG00000011835	pcbp3	88	86.905	Astatotilapia_calliptera
ENSCAFG00020019472	-	81	96.507	ENSACLG00000003801	-	90	96.507	Astatotilapia_calliptera
ENSCAFG00020019472	-	81	91.266	ENSAMXG00000013588	-	92	91.266	Astyanax_mexicanus
ENSCAFG00020019472	-	83	64.865	ENSAMXG00000001760	zgc:110045	68	64.865	Astyanax_mexicanus
ENSCAFG00020019472	-	81	88.492	ENSAMXG00000003440	pcbp3	89	88.492	Astyanax_mexicanus
ENSCAFG00020019472	-	95	96.617	ENSCSAG00000007440	-	93	96.617	Chlorocebus_sabaeus
ENSCAFG00020019472	-	83	83.203	ENSCPBG00000000733	-	66	93.229	Chrysemys_picta_bellii
ENSCAFG00020019472	-	83	98.718	ENSCPBG00000012151	-	88	98.718	Chrysemys_picta_bellii
ENSCAFG00020019472	-	73	88.725	ENSCSEG00000016984	-	91	80.702	Cynoglossus_semilaevis
ENSCAFG00020019472	-	81	91.266	ENSCSEG00000000822	pcbp3	91	91.266	Cynoglossus_semilaevis
ENSCAFG00020019472	-	81	86.905	ENSCVAG00000014482	pcbp3	87	86.905	Cyprinodon_variegatus
ENSCAFG00020019472	-	83	96.567	ENSCVAG00000005262	-	92	96.567	Cyprinodon_variegatus
ENSCAFG00020019472	-	82	89.744	ENSDARG00000054378	pcbp3	97	89.744	Danio_rerio
ENSCAFG00020019472	-	83	81.624	ENSETEG00000015988	-	92	81.624	Echinops_telfairi
ENSCAFG00020019472	-	83	70.531	ENSEBUG00000016192	pcbp3	96	70.531	Eptatretus_burgeri
ENSCAFG00020019472	-	82	84.255	ENSEBUG00000007485	-	92	82.805	Eptatretus_burgeri
ENSCAFG00020019472	-	83	73.305	ENSEBUG00000005495	pcbp3	71	73.305	Eptatretus_burgeri
ENSCAFG00020019472	-	88	92.400	ENSELUG00000001560	-	86	92.400	Esox_lucius
ENSCAFG00020019472	-	86	88.843	ENSELUG00000003521	pcbp3	90	88.843	Esox_lucius
ENSCAFG00020019472	-	78	83.258	ENSFALG00000004411	-	72	76.157	Ficedula_albicollis
ENSCAFG00020019472	-	83	97.863	ENSFALG00000003949	-	92	97.863	Ficedula_albicollis
ENSCAFG00020019472	-	81	92.576	ENSFHEG00000016615	pcbp3	87	92.576	Fundulus_heteroclitus
ENSCAFG00020019472	-	83	93.562	ENSFHEG00000006539	-	92	93.562	Fundulus_heteroclitus
ENSCAFG00020019472	-	82	66.524	ENSGMOG00000008611	-	89	66.524	Gadus_morhua
ENSCAFG00020019472	-	83	86.207	ENSGMOG00000011992	pcbp3	82	86.207	Gadus_morhua
ENSCAFG00020019472	-	83	83.984	ENSGALG00000013155	-	94	81.028	Gallus_gallus
ENSCAFG00020019472	-	89	91.892	ENSGALG00000004394	-	99	91.892	Gallus_gallus
ENSCAFG00020019472	-	81	97.380	ENSGAFG00000010274	-	89	97.380	Gambusia_affinis
ENSCAFG00020019472	-	77	86.636	ENSGAFG00000011430	pcbp3	88	82.143	Gambusia_affinis
ENSCAFG00020019472	-	83	83.529	ENSGACG00000014955	-	85	83.529	Gasterosteus_aculeatus
ENSCAFG00020019472	-	86	94.239	ENSGACG00000002266	-	89	94.239	Gasterosteus_aculeatus
ENSCAFG00020019472	-	84	91.327	ENSGAGG00000000271	-	96	91.327	Gopherus_agassizii
ENSCAFG00020019472	-	78	90.090	ENSGAGG00000006956	-	83	90.865	Gopherus_agassizii
ENSCAFG00020019472	-	81	96.507	ENSHBUG00000021782	-	90	96.507	Haplochromis_burtoni
ENSCAFG00020019472	-	81	92.140	ENSHBUG00000010697	pcbp3	90	92.140	Haplochromis_burtoni
ENSCAFG00020019472	-	86	84.151	ENSHCOG00000017868	pcbp3	90	84.151	Hippocampus_comes
ENSCAFG00020019472	-	85	88.430	ENSHCOG00000006067	-	91	92.228	Hippocampus_comes
ENSCAFG00020019472	-	83	93.991	ENSIPUG00000006238	pcbp3	91	93.991	Ictalurus_punctatus
ENSCAFG00020019472	-	81	96.507	ENSKMAG00000018530	-	89	96.507	Kryptolebias_marmoratus
ENSCAFG00020019472	-	83	85.477	ENSKMAG00000003046	pcbp3	88	87.302	Kryptolebias_marmoratus
ENSCAFG00020019472	-	81	74.359	ENSLBEG00000006542	-	90	74.359	Labrus_bergylta
ENSCAFG00020019472	-	81	93.013	ENSLBEG00000006201	pcbp3	88	93.013	Labrus_bergylta
ENSCAFG00020019472	-	78	92.342	ENSLACG00000010386	pcbp3	72	82.143	Latimeria_chalumnae
ENSCAFG00020019472	-	78	80.995	ENSLACG00000010804	zgc:110045	72	75.899	Latimeria_chalumnae
ENSCAFG00020019472	-	83	98.712	ENSLOCG00000009369	pcbp3	89	98.712	Lepisosteus_oculatus
ENSCAFG00020019472	-	83	83.594	ENSLOCG00000005058	zgc:110045	78	83.594	Lepisosteus_oculatus
ENSCAFG00020019472	-	81	93.013	ENSMAMG00000011620	-	90	93.013	Mastacembelus_armatus
ENSCAFG00020019472	-	81	92.576	ENSMAMG00000022336	pcbp3	85	92.576	Mastacembelus_armatus
ENSCAFG00020019472	-	83	85.593	ENSMZEG00005008993	pcbp3	92	92.670	Maylandia_zebra
ENSCAFG00020019472	-	83	83.128	ENSMZEG00005014882	-	90	83.951	Maylandia_zebra
ENSCAFG00020019472	-	83	81.679	ENSMGAG00000001883	-	89	82.061	Meleagris_gallopavo
ENSCAFG00020019472	-	78	83.710	ENSMGAG00000006794	-	72	76.512	Meleagris_gallopavo
ENSCAFG00020019472	-	81	91.342	ENSMMOG00000000730	pcbp3	81	91.342	Mola_mola
ENSCAFG00020019472	-	81	93.450	ENSMMOG00000005216	-	90	93.450	Mola_mola
ENSCAFG00020019472	-	55	80.165	ENSMODG00000027884	-	86	80.165	Monodelphis_domestica
ENSCAFG00020019472	-	76	93.458	ENSMALG00000000691	pcbp3	93	94.030	Monopterus_albus
ENSCAFG00020019472	-	95	88.390	ENSMPUG00000001779	-	89	88.390	Mustela_putorius_furo
ENSCAFG00020019472	-	85	82.400	ENSNBRG00000016714	-	93	82.400	Neolamprologus_brichardi
ENSCAFG00020019472	-	77	89.401	ENSNBRG00000016409	-	88	83.730	Neolamprologus_brichardi
ENSCAFG00020019472	-	78	92.793	ENSOPRG00000003431	-	97	86.770	Ochotona_princeps
ENSCAFG00020019472	-	81	86.853	ENSONIG00000012122	-	85	86.853	Oreochromis_niloticus
ENSCAFG00020019472	-	81	96.507	ENSONIG00000004611	-	90	96.507	Oreochromis_niloticus
ENSCAFG00020019472	-	95	95.865	ENSOCUG00000002696	-	93	95.865	Oryctolagus_cuniculus
ENSCAFG00020019472	-	81	97.380	ENSORLG00000022739	-	90	97.380	Oryzias_latipes
ENSCAFG00020019472	-	81	96.507	ENSORLG00000000059	pcbp3	92	96.507	Oryzias_latipes
ENSCAFG00020019472	-	81	96.507	ENSORLG00020012671	pcbp3	90	96.507	Oryzias_latipes_hni
ENSCAFG00020019472	-	81	96.943	ENSORLG00020006124	-	90	96.943	Oryzias_latipes_hni
ENSCAFG00020019472	-	81	96.507	ENSORLG00015000429	pcbp3	90	96.507	Oryzias_latipes_hsok
ENSCAFG00020019472	-	81	97.380	ENSORLG00015008051	-	88	97.380	Oryzias_latipes_hsok
ENSCAFG00020019472	-	81	96.943	ENSOMEG00000020162	-	90	96.943	Oryzias_melastigma
ENSCAFG00020019472	-	79	94.203	ENSOMEG00000020811	pcbp3	91	94.203	Oryzias_melastigma
ENSCAFG00020019472	-	83	88.123	ENSOGAG00000008044	-	88	88.123	Otolemur_garnettii
ENSCAFG00020019472	-	78	77.928	ENSPKIG00000020913	-	87	81.683	Paramormyrops_kingsleyae
ENSCAFG00020019472	-	81	97.817	ENSPKIG00000019329	pcbp3	89	97.817	Paramormyrops_kingsleyae
ENSCAFG00020019472	-	77	79.532	ENSPSIG00000008350	-	50	91.597	Pelodiscus_sinensis
ENSCAFG00020019472	-	83	85.470	ENSPSIG00000014970	-	88	86.325	Pelodiscus_sinensis
ENSCAFG00020019472	-	81	87.649	ENSPMGG00000022383	pcbp3	88	87.649	Periophthalmus_magnuspinnatus
ENSCAFG00020019472	-	86	72.951	ENSPMAG00000004551	pcbp3	70	72.951	Petromyzon_marinus
ENSCAFG00020019472	-	69	89.119	ENSPMAG00000004637	-	100	89.119	Petromyzon_marinus
ENSCAFG00020019472	-	74	99.517	ENSPCIG00000028092	-	99	93.722	Phascolarctos_cinereus
ENSCAFG00020019472	-	85	80.303	ENSPLAG00000011449	pcbp3	80	80.303	Poecilia_latipinna
ENSCAFG00020019472	-	83	93.534	ENSPLAG00000004074	-	82	93.534	Poecilia_latipinna
ENSCAFG00020019472	-	84	87.600	ENSPMEG00000006653	-	90	88.000	Poecilia_mexicana
ENSCAFG00020019472	-	86	83.582	ENSPMEG00000021239	pcbp3	96	85.526	Poecilia_mexicana
ENSCAFG00020019472	-	81	93.886	ENSPREG00000020585	-	91	98.020	Poecilia_reticulata
ENSCAFG00020019472	-	81	90.043	ENSPREG00000015736	pcbp3	91	90.043	Poecilia_reticulata
ENSCAFG00020019472	-	81	93.013	ENSPNYG00000013205	-	90	93.013	Pundamilia_nyererei
ENSCAFG00020019472	-	81	92.576	ENSPNYG00000012326	pcbp3	88	92.576	Pundamilia_nyererei
ENSCAFG00020019472	-	81	92.140	ENSPNAG00000008541	-	91	92.140	Pygocentrus_nattereri
ENSCAFG00020019472	-	83	96.996	ENSPNAG00000015104	pcbp3	92	96.996	Pygocentrus_nattereri
ENSCAFG00020019472	-	83	100.000	ENSRNOG00000001245	Pcbp3	92	100.000	Rattus_norvegicus
ENSCAFG00020019472	-	94	82.909	ENSRBIG00000028177	-	93	82.909	Rhinopithecus_bieti
ENSCAFG00020019472	-	83	98.718	ENSSHAG00000007890	-	91	98.718	Sarcophilus_harrisii
ENSCAFG00020019472	-	83	84.549	ENSSFOG00015007118	-	88	84.549	Scleropages_formosus
ENSCAFG00020019472	-	81	87.302	ENSSFOG00015014706	pcbp3	88	87.302	Scleropages_formosus
ENSCAFG00020019472	-	81	97.380	ENSSFOG00015010205	pcbp3	89	97.380	Scleropages_formosus
ENSCAFG00020019472	-	81	96.943	ENSSMAG00000003135	-	90	96.943	Scophthalmus_maximus
ENSCAFG00020019472	-	81	93.013	ENSSMAG00000011929	pcbp3	89	93.013	Scophthalmus_maximus
ENSCAFG00020019472	-	87	84.836	ENSSDUG00000008502	-	94	84.836	Seriola_dumerili
ENSCAFG00020019472	-	77	89.862	ENSSDUG00000011608	pcbp3	91	83.730	Seriola_dumerili
ENSCAFG00020019472	-	81	97.380	ENSSLDG00000020161	-	89	97.380	Seriola_lalandi_dorsalis
ENSCAFG00020019472	-	77	89.862	ENSSLDG00000008518	pcbp3	91	83.730	Seriola_lalandi_dorsalis
ENSCAFG00020019472	-	84	80.184	ENSSPUG00000013214	-	90	86.935	Sphenodon_punctatus
ENSCAFG00020019472	-	80	96.482	ENSSPAG00000004190	-	92	96.482	Stegastes_partitus
ENSCAFG00020019472	-	84	70.464	ENSSPAG00000023341	-	87	72.680	Stegastes_partitus
ENSCAFG00020019472	-	83	93.590	ENSTGUG00000003316	-	87	93.590	Taeniopygia_guttata
ENSCAFG00020019472	-	83	91.845	ENSTGUG00000008158	-	92	91.845	Taeniopygia_guttata
ENSCAFG00020019472	-	81	88.843	ENSTRUG00000013604	pcbp3	82	97.872	Takifugu_rubripes
ENSCAFG00020019472	-	79	96.552	ENSTRUG00000006280	-	84	96.552	Takifugu_rubripes
ENSCAFG00020019472	-	83	89.494	ENSTTRG00000015075	-	88	89.494	Tursiops_truncatus
ENSCAFG00020019472	-	84	97.447	ENSXETG00000011483	pcbp1	86	97.447	Xenopus_tropicalis
ENSCAFG00020019472	-	84	75.862	ENSXETG00000010491	pcbp2	57	75.862	Xenopus_tropicalis
ENSCAFG00020019472	-	86	83.582	ENSXCOG00000020481	pcbp3	91	83.582	Xiphophorus_couchianus
ENSCAFG00020019472	-	81	97.380	ENSXMAG00000028711	-	89	97.380	Xiphophorus_maculatus
ENSCAFG00020019472	-	81	87.302	ENSXMAG00000008175	pcbp3	88	87.302	Xiphophorus_maculatus