EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020019731 (Gene tree)
Gene ID: 112645576
Gene Symbol: GPATCH1
Alias: ECGP|FLJ10206|FLJ38686|GPATC1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 38570 bases
Position: chrQKWQ01000848.1:119586926-119625495
Accession: 24658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020025099	DUF1604	PF07713.13	1.3e-35	1	1
ENSCAFP00020025099	G-patch	PF01585.23	2.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020028964	GPATCH1-201	2796	-	ENSCAFP00020025099	931 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020019731's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020019731's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020019731	GPATCH1	91	89.202	ENSG00000076650	GPATCH1	94	89.257	Homo_sapiens
ENSCAFG00020019731	GPATCH1	91	95.182	ENSAMEG00000015575	GPATCH1	94	95.195	Ailuropoda_melanoleuca
ENSCAFG00020019731	GPATCH1	81	70.718	ENSAOCG00000006668	gpatch1	79	70.718	Amphiprion_ocellaris
ENSCAFG00020019731	GPATCH1	81	54.922	ENSAPEG00000000026	gpatch1	90	52.114	Amphiprion_percula
ENSCAFG00020019731	GPATCH1	81	52.764	ENSATEG00000014494	gpatch1	90	50.903	Anabas_testudineus
ENSCAFG00020019731	GPATCH1	90	60.579	ENSAPLG00000007584	GPATCH1	96	61.697	Anas_platyrhynchos
ENSCAFG00020019731	GPATCH1	91	89.202	ENSANAG00000027002	GPATCH1	94	89.257	Aotus_nancymaae
ENSCAFG00020019731	GPATCH1	81	54.765	ENSACLG00000024740	gpatch1	79	53.895	Astatotilapia_calliptera
ENSCAFG00020019731	GPATCH1	91	52.495	ENSAMXG00000020177	gpatch1	99	52.326	Astyanax_mexicanus
ENSCAFG00020019731	GPATCH1	91	90.118	ENSBTAG00000000721	GPATCH1	94	90.046	Bos_taurus
ENSCAFG00020019731	GPATCH1	91	88.954	ENSCJAG00000000684	GPATCH1	94	88.914	Callithrix_jacchus
ENSCAFG00020019731	GPATCH1	94	100.000	ENSCAFG00000007457	GPATCH1	79	100.000	Canis_familiaris
ENSCAFG00020019731	GPATCH1	91	91.412	ENSCHIG00000019626	GPATCH1	94	91.304	Capra_hircus
ENSCAFG00020019731	GPATCH1	88	78.986	ENSCAPG00000008827	GPATCH1	93	79.695	Cavia_aperea
ENSCAFG00020019731	GPATCH1	91	82.009	ENSCPOG00000024477	GPATCH1	94	82.594	Cavia_porcellus
ENSCAFG00020019731	GPATCH1	91	88.850	ENSCCAG00000024676	GPATCH1	94	89.371	Cebus_capucinus
ENSCAFG00020019731	GPATCH1	91	89.894	ENSCATG00000043637	GPATCH1	94	89.931	Cercocebus_atys
ENSCAFG00020019731	GPATCH1	89	83.193	ENSCLAG00000003395	-	94	83.077	Chinchilla_lanigera
ENSCAFG00020019731	GPATCH1	91	87.104	ENSCSAG00000004743	GPATCH1	94	87.215	Chlorocebus_sabaeus
ENSCAFG00020019731	GPATCH1	83	81.477	ENSCHOG00000012865	GPATCH1	89	81.477	Choloepus_hoffmanni
ENSCAFG00020019731	GPATCH1	78	70.999	ENSCPBG00000000666	GPATCH1	92	70.999	Chrysemys_picta_bellii
ENSCAFG00020019731	GPATCH1	81	35.901	ENSCING00000012518	-	95	35.342	Ciona_intestinalis
ENSCAFG00020019731	GPATCH1	85	85.494	ENSCANG00000012540	GPATCH1	93	85.879	Colobus_angolensis_palliatus
ENSCAFG00020019731	GPATCH1	88	81.611	ENSCGRG00001016736	Gpatch1	94	81.637	Cricetulus_griseus_chok1gshd
ENSCAFG00020019731	GPATCH1	89	67.175	ENSCGRG00000005069	Gpatch1	93	67.237	Cricetulus_griseus_crigri
ENSCAFG00020019731	GPATCH1	78	51.214	ENSCSEG00000019456	-	84	62.385	Cynoglossus_semilaevis
ENSCAFG00020019731	GPATCH1	90	51.325	ENSDARG00000033418	gpatch1	95	51.230	Danio_rerio
ENSCAFG00020019731	GPATCH1	95	87.415	ENSDNOG00000005291	GPATCH1	98	87.415	Dasypus_novemcinctus
ENSCAFG00020019731	GPATCH1	96	78.508	ENSDORG00000012546	Gpatch1	99	78.508	Dipodomys_ordii
ENSCAFG00020019731	GPATCH1	82	32.396	FBgn0036386	CG8833	67	33.621	Drosophila_melanogaster
ENSCAFG00020019731	GPATCH1	91	77.347	ENSETEG00000003626	GPATCH1	95	77.600	Echinops_telfairi
ENSCAFG00020019731	GPATCH1	94	37.568	ENSEBUG00000011286	gpatch1	91	38.178	Eptatretus_burgeri
ENSCAFG00020019731	GPATCH1	91	89.349	ENSEASG00005021162	GPATCH1	93	90.074	Equus_asinus_asinus
ENSCAFG00020019731	GPATCH1	95	89.302	ENSECAG00000022743	GPATCH1	92	89.302	Equus_caballus
ENSCAFG00020019731	GPATCH1	78	79.412	ENSEEUG00000012925	GPATCH1	78	79.412	Erinaceus_europaeus
ENSCAFG00020019731	GPATCH1	91	51.302	ENSELUG00000018195	gpatch1	90	50.674	Esox_lucius
ENSCAFG00020019731	GPATCH1	91	92.244	ENSFCAG00000014917	GPATCH1	94	92.334	Felis_catus
ENSCAFG00020019731	GPATCH1	92	61.538	ENSFALG00000007821	GPATCH1	89	62.881	Ficedula_albicollis
ENSCAFG00020019731	GPATCH1	89	82.930	ENSFDAG00000003871	GPATCH1	94	82.568	Fukomys_damarensis
ENSCAFG00020019731	GPATCH1	83	51.508	ENSGMOG00000003830	gpatch1	95	51.508	Gadus_morhua
ENSCAFG00020019731	GPATCH1	93	62.770	ENSGALG00000004839	GPATCH1	93	63.251	Gallus_gallus
ENSCAFG00020019731	GPATCH1	81	50.777	ENSGACG00000017544	gpatch1	97	47.811	Gasterosteus_aculeatus
ENSCAFG00020019731	GPATCH1	91	66.082	ENSGAGG00000010067	GPATCH1	95	65.506	Gopherus_agassizii
ENSCAFG00020019731	GPATCH1	90	88.636	ENSGGOG00000010862	GPATCH1	94	89.412	Gorilla_gorilla
ENSCAFG00020019731	GPATCH1	81	54.917	ENSHBUG00000023462	gpatch1	96	50.000	Haplochromis_burtoni
ENSCAFG00020019731	GPATCH1	91	84.174	ENSHGLG00000009334	GPATCH1	94	84.703	Heterocephalus_glaber_female
ENSCAFG00020019731	GPATCH1	91	84.291	ENSHGLG00100018074	GPATCH1	94	84.817	Heterocephalus_glaber_male
ENSCAFG00020019731	GPATCH1	93	52.141	ENSIPUG00000014977	gpatch1	90	52.733	Ictalurus_punctatus
ENSCAFG00020019731	GPATCH1	91	86.737	ENSSTOG00000003720	GPATCH1	94	86.857	Ictidomys_tridecemlineatus
ENSCAFG00020019731	GPATCH1	91	84.118	ENSJJAG00000023765	Gpatch1	94	83.982	Jaculus_jaculus
ENSCAFG00020019731	GPATCH1	90	51.505	ENSKMAG00000017950	gpatch1	89	51.448	Kryptolebias_marmoratus
ENSCAFG00020019731	GPATCH1	81	52.250	ENSLBEG00000026527	gpatch1	88	50.895	Labrus_bergylta
ENSCAFG00020019731	GPATCH1	88	59.353	ENSLACG00000008130	GPATCH1	90	59.472	Latimeria_chalumnae
ENSCAFG00020019731	GPATCH1	82	58.612	ENSLOCG00000001800	gpatch1	90	55.930	Lepisosteus_oculatus
ENSCAFG00020019731	GPATCH1	91	89.189	ENSLAFG00000013589	GPATCH1	94	89.359	Loxodonta_africana
ENSCAFG00020019731	GPATCH1	90	89.917	ENSMFAG00000034418	GPATCH1	95	89.917	Macaca_fascicularis
ENSCAFG00020019731	GPATCH1	91	89.566	ENSMMUG00000011790	GPATCH1	94	89.612	Macaca_mulatta
ENSCAFG00020019731	GPATCH1	91	89.437	ENSMNEG00000045084	GPATCH1	94	89.486	Macaca_nemestrina
ENSCAFG00020019731	GPATCH1	91	77.791	ENSMLEG00000043840	GPATCH1	93	78.146	Mandrillus_leucophaeus
ENSCAFG00020019731	GPATCH1	81	54.638	ENSMZEG00005001926	gpatch1	80	53.768	Maylandia_zebra
ENSCAFG00020019731	GPATCH1	91	63.827	ENSMGAG00000005775	GPATCH1	93	62.900	Meleagris_gallopavo
ENSCAFG00020019731	GPATCH1	90	78.799	ENSMICG00000004829	GPATCH1	93	79.505	Microcebus_murinus
ENSCAFG00020019731	GPATCH1	91	82.360	ENSMOCG00000000174	Gpatch1	95	82.366	Microtus_ochrogaster
ENSCAFG00020019731	GPATCH1	81	50.818	ENSMMOG00000002140	gpatch1	87	51.186	Mola_mola
ENSCAFG00020019731	GPATCH1	91	75.587	ENSMODG00000012226	GPATCH1	90	75.587	Monodelphis_domestica
ENSCAFG00020019731	GPATCH1	81	52.125	ENSMALG00000014386	gpatch1	96	49.729	Monopterus_albus
ENSCAFG00020019731	GPATCH1	93	84.144	ENSMUSG00000063808	Gpatch1	100	94.898	Mus_musculus
ENSCAFG00020019731	GPATCH1	93	84.411	MGP_PahariEiJ_G0012816	Gpatch1	100	95.918	Mus_pahari
ENSCAFG00020019731	GPATCH1	93	83.237	MGP_SPRETEiJ_G0030681	Gpatch1	100	95.918	Mus_spretus
ENSCAFG00020019731	GPATCH1	91	93.772	ENSMPUG00000007658	GPATCH1	94	93.822	Mustela_putorius_furo
ENSCAFG00020019731	GPATCH1	91	89.424	ENSMLUG00000012161	GPATCH1	94	89.474	Myotis_lucifugus
ENSCAFG00020019731	GPATCH1	91	85.211	ENSNGAG00000012455	Gpatch1	94	85.126	Nannospalax_galili
ENSCAFG00020019731	GPATCH1	91	88.954	ENSNLEG00000007659	GPATCH1	94	89.016	Nomascus_leucogenys
ENSCAFG00020019731	GPATCH1	79	68.256	ENSMEUG00000015174	GPATCH1	79	67.711	Notamacropus_eugenii
ENSCAFG00020019731	GPATCH1	91	81.141	ENSODEG00000007103	GPATCH1	94	81.406	Octodon_degus
ENSCAFG00020019731	GPATCH1	82	55.412	ENSONIG00000003302	gpatch1	91	53.819	Oreochromis_niloticus
ENSCAFG00020019731	GPATCH1	93	72.394	ENSOANG00000012732	GPATCH1	91	72.727	Ornithorhynchus_anatinus
ENSCAFG00020019731	GPATCH1	91	88.837	ENSOCUG00000015905	GPATCH1	94	88.673	Oryctolagus_cuniculus
ENSCAFG00020019731	GPATCH1	90	51.459	ENSORLG00000018706	gpatch1	88	51.351	Oryzias_latipes
ENSCAFG00020019731	GPATCH1	90	49.769	ENSOMEG00000022688	gpatch1	94	49.888	Oryzias_melastigma
ENSCAFG00020019731	GPATCH1	85	88.243	ENSOGAG00000004016	GPATCH1	100	88.243	Otolemur_garnettii
ENSCAFG00020019731	GPATCH1	90	90.629	ENSOARG00000004365	GPATCH1	93	90.427	Ovis_aries
ENSCAFG00020019731	GPATCH1	91	88.850	ENSPPAG00000020990	GPATCH1	94	88.914	Pan_paniscus
ENSCAFG00020019731	GPATCH1	91	92.597	ENSPPRG00000017245	GPATCH1	94	92.677	Panthera_pardus
ENSCAFG00020019731	GPATCH1	91	93.302	ENSPTIG00000019649	GPATCH1	94	93.364	Panthera_tigris_altaica
ENSCAFG00020019731	GPATCH1	91	88.967	ENSPTRG00000010803	GPATCH1	94	89.029	Pan_troglodytes
ENSCAFG00020019731	GPATCH1	91	89.659	ENSPANG00000012374	GPATCH1	98	89.703	Papio_anubis
ENSCAFG00020019731	GPATCH1	81	57.452	ENSPKIG00000020745	gpatch1	82	56.407	Paramormyrops_kingsleyae
ENSCAFG00020019731	GPATCH1	91	65.421	ENSPSIG00000013433	GPATCH1	94	64.673	Pelodiscus_sinensis
ENSCAFG00020019731	GPATCH1	91	83.666	ENSPEMG00000000636	Gpatch1	94	83.638	Peromyscus_maniculatus_bairdii
ENSCAFG00020019731	GPATCH1	91	76.061	ENSPCIG00000021003	GPATCH1	99	74.691	Phascolarctos_cinereus
ENSCAFG00020019731	GPATCH1	71	50.000	ENSPREG00000008264	gpatch1	97	44.637	Poecilia_reticulata
ENSCAFG00020019731	GPATCH1	91	86.150	ENSPPYG00000009824	GPATCH1	94	86.286	Pongo_abelii
ENSCAFG00020019731	GPATCH1	83	81.087	ENSPCAG00000005931	GPATCH1	86	81.306	Procavia_capensis
ENSCAFG00020019731	GPATCH1	93	81.724	ENSPCOG00000009674	GPATCH1	97	83.019	Propithecus_coquereli
ENSCAFG00020019731	GPATCH1	84	87.449	ENSPVAG00000017767	GPATCH1	86	87.449	Pteropus_vampyrus
ENSCAFG00020019731	GPATCH1	81	54.835	ENSPNYG00000018189	gpatch1	89	54.370	Pundamilia_nyererei
ENSCAFG00020019731	GPATCH1	91	52.974	ENSPNAG00000013187	gpatch1	94	53.118	Pygocentrus_nattereri
ENSCAFG00020019731	GPATCH1	93	84.028	ENSRNOG00000011584	Gpatch1	94	83.982	Rattus_norvegicus
ENSCAFG00020019731	GPATCH1	93	81.640	ENSRBIG00000034723	GPATCH1	93	80.822	Rhinopithecus_bieti
ENSCAFG00020019731	GPATCH1	91	89.671	ENSRROG00000024428	GPATCH1	94	89.829	Rhinopithecus_roxellana
ENSCAFG00020019731	GPATCH1	91	89.189	ENSSBOG00000034650	GPATCH1	94	89.245	Saimiri_boliviensis_boliviensis
ENSCAFG00020019731	GPATCH1	91	75.264	ENSSHAG00000016016	GPATCH1	94	74.315	Sarcophilus_harrisii
ENSCAFG00020019731	GPATCH1	81	55.725	ENSSFOG00015011535	gpatch1	89	53.588	Scleropages_formosus
ENSCAFG00020019731	GPATCH1	81	49.267	ENSSMAG00000002883	gpatch1	93	48.060	Scophthalmus_maximus
ENSCAFG00020019731	GPATCH1	81	52.375	ENSSDUG00000007444	gpatch1	90	49.889	Seriola_dumerili
ENSCAFG00020019731	GPATCH1	81	52.250	ENSSLDG00000002856	gpatch1	89	53.817	Seriola_lalandi_dorsalis
ENSCAFG00020019731	GPATCH1	73	85.778	ENSSARG00000004108	GPATCH1	72	85.778	Sorex_araneus
ENSCAFG00020019731	GPATCH1	95	90.136	ENSSSCG00000002865	GPATCH1	98	90.136	Sus_scrofa
ENSCAFG00020019731	GPATCH1	92	63.279	ENSTGUG00000009401	GPATCH1	91	63.102	Taeniopygia_guttata
ENSCAFG00020019731	GPATCH1	81	51.697	ENSTRUG00000025081	gpatch1	90	49.941	Takifugu_rubripes
ENSCAFG00020019731	GPATCH1	81	51.567	ENSTRUG00000005785	-	90	49.824	Takifugu_rubripes
ENSCAFG00020019731	GPATCH1	81	53.558	ENSTNIG00000002554	gpatch1	99	54.146	Tetraodon_nigroviridis
ENSCAFG00020019731	GPATCH1	64	77.536	ENSTBEG00000007750	-	84	77.536	Tupaia_belangeri
ENSCAFG00020019731	GPATCH1	91	81.712	ENSTTRG00000012221	GPATCH1	94	81.870	Tursiops_truncatus
ENSCAFG00020019731	GPATCH1	91	94.326	ENSUMAG00000014645	GPATCH1	96	93.185	Ursus_maritimus
ENSCAFG00020019731	GPATCH1	79	97.143	ENSVPAG00000010313	GPATCH1	88	97.283	Vicugna_pacos
ENSCAFG00020019731	GPATCH1	100	99.141	ENSVVUG00000016572	GPATCH1	100	99.141	Vulpes_vulpes
ENSCAFG00020019731	GPATCH1	92	52.332	ENSXETG00000018276	gpatch1	93	54.111	Xenopus_tropicalis