EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020019775 (Gene tree)
Gene ID: 112664028
Gene Symbol: SF3B4
Alias: Hsh49|SAP49|SF3b49
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 4600 bases
Position: chrQKWQ01001382.1:4934540-4939139
Accession: 112664028
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020025149	RRM_1	PF00076.22	3.6e-39	1	2
ENSCAFP00020025149	RRM_1	PF00076.22	3.6e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020029024	SF3B4-201	1275	-	ENSCAFP00020025149	424 (aa)	XP_025308971	UPI00004A5DEE

Gene Model

Click here to download ENSCAFG00020019775's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020019775's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020019775	SF3B4	70	39.344	ENSCAFG00020000440	PABPC1	57	39.344

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020019775	SF3B4	100	99.292	ENSG00000143368	SF3B4	100	100.000	Homo_sapiens
ENSCAFG00020019775	SF3B4	57	96.667	ENSAPOG00000017647	sf3b4	77	80.251	Acanthochromis_polyacanthus
ENSCAFG00020019775	SF3B4	100	99.528	ENSAMEG00000010073	SF3B4	100	99.528	Ailuropoda_melanoleuca
ENSCAFG00020019775	SF3B4	57	96.667	ENSAOCG00000019801	sf3b4	77	80.251	Amphiprion_ocellaris
ENSCAFG00020019775	SF3B4	57	96.667	ENSAPEG00000010365	sf3b4	77	80.251	Amphiprion_percula
ENSCAFG00020019775	SF3B4	57	96.250	ENSATEG00000012844	sf3b4	60	96.250	Anabas_testudineus
ENSCAFG00020019775	SF3B4	62	96.198	ENSACAG00000010019	SF3B4	90	90.078	Anolis_carolinensis
ENSCAFG00020019775	SF3B4	100	99.292	ENSANAG00000031025	SF3B4	100	99.292	Aotus_nancymaae
ENSCAFG00020019775	SF3B4	57	95.833	ENSACLG00000014260	sf3b4	60	95.833	Astatotilapia_calliptera
ENSCAFG00020019775	SF3B4	57	96.250	ENSAMXG00000008282	sf3b4	60	96.250	Astyanax_mexicanus
ENSCAFG00020019775	SF3B4	84	98.039	ENSBTAG00000012793	-	88	98.039	Bos_taurus
ENSCAFG00020019775	SF3B4	100	99.528	ENSBTAG00000012495	SF3B4	100	99.528	Bos_taurus
ENSCAFG00020019775	SF3B4	58	64.685	WBGene00004723	sap-49	54	81.991	Caenorhabditis_elegans
ENSCAFG00020019775	SF3B4	90	81.443	ENSCJAG00000042351	SF3B4	87	81.443	Callithrix_jacchus
ENSCAFG00020019775	SF3B4	100	100.000	ENSCAFG00000011617	SF3B4	100	100.000	Canis_familiaris
ENSCAFG00020019775	SF3B4	100	99.528	ENSCHIG00000025663	-	100	99.528	Capra_hircus
ENSCAFG00020019775	SF3B4	100	99.292	ENSTSYG00000009295	SF3B4	100	99.292	Carlito_syrichta
ENSCAFG00020019775	SF3B4	98	79.675	ENSCAPG00000006451	SF3B4	96	82.927	Cavia_aperea
ENSCAFG00020019775	SF3B4	100	99.528	ENSCPOG00000008267	SF3B4	100	99.528	Cavia_porcellus
ENSCAFG00020019775	SF3B4	95	85.323	ENSCCAG00000019823	-	71	91.030	Cebus_capucinus
ENSCAFG00020019775	SF3B4	100	86.768	ENSCCAG00000021751	-	69	92.593	Cebus_capucinus
ENSCAFG00020019775	SF3B4	100	99.292	ENSCATG00000033114	SF3B4	100	99.292	Cercocebus_atys
ENSCAFG00020019775	SF3B4	100	99.528	ENSCLAG00000015851	SF3B4	100	99.528	Chinchilla_lanigera
ENSCAFG00020019775	SF3B4	100	99.292	ENSCSAG00000018129	SF3B4	100	99.292	Chlorocebus_sabaeus
ENSCAFG00020019775	SF3B4	99	85.849	ENSCPBG00000008041	SF3B4	91	90.365	Chrysemys_picta_bellii
ENSCAFG00020019775	SF3B4	50	90.654	ENSCING00000002337	-	57	90.521	Ciona_intestinalis
ENSCAFG00020019775	SF3B4	100	99.292	ENSCANG00000035579	SF3B4	100	99.292	Colobus_angolensis_palliatus
ENSCAFG00020019775	SF3B4	100	99.292	ENSCGRG00001003590	Sf3b4	100	99.292	Cricetulus_griseus_chok1gshd
ENSCAFG00020019775	SF3B4	100	99.292	ENSCGRG00000016914	Sf3b4	100	99.292	Cricetulus_griseus_crigri
ENSCAFG00020019775	SF3B4	57	96.250	ENSDARG00000018574	sf3b4	77	79.310	Danio_rerio
ENSCAFG00020019775	SF3B4	98	96.635	ENSDNOG00000048908	-	99	96.635	Dasypus_novemcinctus
ENSCAFG00020019775	SF3B4	97	80.630	ENSDNOG00000037231	-	76	81.789	Dasypus_novemcinctus
ENSCAFG00020019775	SF3B4	100	99.528	ENSDORG00000016366	Sf3b4	100	99.528	Dipodomys_ordii
ENSCAFG00020019775	SF3B4	76	92.593	ENSETEG00000008963	SF3B4	76	92.593	Echinops_telfairi
ENSCAFG00020019775	SF3B4	100	99.528	ENSEASG00005001477	SF3B4	100	99.528	Equus_asinus_asinus
ENSCAFG00020019775	SF3B4	100	99.528	ENSECAG00000024737	SF3B4	100	99.528	Equus_caballus
ENSCAFG00020019775	SF3B4	57	97.083	ENSELUG00000012876	sf3b4	60	97.083	Esox_lucius
ENSCAFG00020019775	SF3B4	100	99.528	ENSFCAG00000010106	SF3B4	100	99.528	Felis_catus
ENSCAFG00020019775	SF3B4	100	99.528	ENSFDAG00000009286	SF3B4	100	99.528	Fukomys_damarensis
ENSCAFG00020019775	SF3B4	54	96.957	ENSGMOG00000002519	sf3b4	67	97.368	Gadus_morhua
ENSCAFG00020019775	SF3B4	99	88.889	ENSGALG00000013352	SF3B4	90	89.295	Gallus_gallus
ENSCAFG00020019775	SF3B4	63	92.453	ENSGAFG00000010181	sf3b4	58	97.807	Gambusia_affinis
ENSCAFG00020019775	SF3B4	99	85.613	ENSGAGG00000025055	SF3B4	79	90.104	Gopherus_agassizii
ENSCAFG00020019775	SF3B4	100	99.292	ENSGGOG00000004761	SF3B4	100	99.292	Gorilla_gorilla
ENSCAFG00020019775	SF3B4	100	73.113	ENSGGOG00000038845	-	54	89.524	Gorilla_gorilla
ENSCAFG00020019775	SF3B4	57	95.833	ENSHBUG00000002028	sf3b4	60	95.833	Haplochromis_burtoni
ENSCAFG00020019775	SF3B4	100	99.528	ENSHGLG00000012360	SF3B4	100	99.528	Heterocephalus_glaber_female
ENSCAFG00020019775	SF3B4	100	98.349	ENSHGLG00100008533	SF3B4	100	98.349	Heterocephalus_glaber_male
ENSCAFG00020019775	SF3B4	57	96.667	ENSIPUG00000012242	Sf3b4	77	79.688	Ictalurus_punctatus
ENSCAFG00020019775	SF3B4	100	99.528	ENSSTOG00000000684	-	100	99.528	Ictidomys_tridecemlineatus
ENSCAFG00020019775	SF3B4	76	84.052	ENSJJAG00000022500	Sf3b4	95	84.052	Jaculus_jaculus
ENSCAFG00020019775	SF3B4	56	96.203	ENSKMAG00000008154	sf3b4	58	98.246	Kryptolebias_marmoratus
ENSCAFG00020019775	SF3B4	55	97.425	ENSLBEG00000026818	sf3b4	57	98.246	Labrus_bergylta
ENSCAFG00020019775	SF3B4	57	95.473	ENSLACG00000004436	SF3B4	67	95.473	Latimeria_chalumnae
ENSCAFG00020019775	SF3B4	57	95.885	ENSLOCG00000009048	sf3b4	75	85.266	Lepisosteus_oculatus
ENSCAFG00020019775	SF3B4	100	99.059	ENSLAFG00000008531	SF3B4	100	99.059	Loxodonta_africana
ENSCAFG00020019775	SF3B4	92	70.812	ENSMFAG00000039067	-	57	80.930	Macaca_fascicularis
ENSCAFG00020019775	SF3B4	100	99.292	ENSMFAG00000042395	SF3B4	100	99.292	Macaca_fascicularis
ENSCAFG00020019775	SF3B4	100	99.292	ENSMMUG00000007256	SF3B4	100	99.292	Macaca_mulatta
ENSCAFG00020019775	SF3B4	100	99.292	ENSMNEG00000031839	SF3B4	100	99.292	Macaca_nemestrina
ENSCAFG00020019775	SF3B4	92	70.305	ENSMNEG00000031526	-	57	80.465	Macaca_nemestrina
ENSCAFG00020019775	SF3B4	100	99.292	ENSMLEG00000038667	SF3B4	100	99.292	Mandrillus_leucophaeus
ENSCAFG00020019775	SF3B4	57	97.083	ENSMAMG00000014692	sf3b4	60	97.083	Mastacembelus_armatus
ENSCAFG00020019775	SF3B4	57	95.833	ENSMZEG00005026741	sf3b4	60	95.833	Maylandia_zebra
ENSCAFG00020019775	SF3B4	99	87.470	ENSMGAG00000000653	SF3B4	91	89.034	Meleagris_gallopavo
ENSCAFG00020019775	SF3B4	100	99.292	ENSMAUG00000015266	Sf3b4	100	99.292	Mesocricetus_auratus
ENSCAFG00020019775	SF3B4	100	99.528	ENSMICG00000044961	SF3B4	100	99.528	Microcebus_murinus
ENSCAFG00020019775	SF3B4	98	94.458	ENSMOCG00000014155	-	100	94.458	Microtus_ochrogaster
ENSCAFG00020019775	SF3B4	100	99.292	ENSMOCG00000013658	-	100	99.292	Microtus_ochrogaster
ENSCAFG00020019775	SF3B4	54	97.826	ENSMMOG00000018032	sf3b4	58	97.807	Mola_mola
ENSCAFG00020019775	SF3B4	100	98.821	ENSMODG00000018767	SF3B4	100	98.821	Monodelphis_domestica
ENSCAFG00020019775	SF3B4	54	97.797	ENSMALG00000006174	sf3b4	57	97.368	Monopterus_albus
ENSCAFG00020019775	SF3B4	100	99.057	MGP_CAROLIEiJ_G0025365	Sf3b4	100	99.057	Mus_caroli
ENSCAFG00020019775	SF3B4	100	99.292	ENSMUSG00000068856	Sf3b4	100	99.292	Mus_musculus
ENSCAFG00020019775	SF3B4	100	99.292	MGP_PahariEiJ_G0026809	Sf3b4	100	99.292	Mus_pahari
ENSCAFG00020019775	SF3B4	100	99.292	MGP_SPRETEiJ_G0026309	Sf3b4	100	99.292	Mus_spretus
ENSCAFG00020019775	SF3B4	100	99.528	ENSMPUG00000005563	SF3B4	100	99.528	Mustela_putorius_furo
ENSCAFG00020019775	SF3B4	100	99.292	ENSMLUG00000010789	SF3B4	100	99.292	Myotis_lucifugus
ENSCAFG00020019775	SF3B4	100	99.057	ENSNGAG00000016337	Sf3b4	100	99.057	Nannospalax_galili
ENSCAFG00020019775	SF3B4	57	96.250	ENSNBRG00000013865	sf3b4	60	96.250	Neolamprologus_brichardi
ENSCAFG00020019775	SF3B4	100	69.626	ENSNLEG00000009693	-	100	69.626	Nomascus_leucogenys
ENSCAFG00020019775	SF3B4	100	76.415	ENSNLEG00000000537	-	82	84.568	Nomascus_leucogenys
ENSCAFG00020019775	SF3B4	81	100.000	ENSMEUG00000003272	SF3B4	82	100.000	Notamacropus_eugenii
ENSCAFG00020019775	SF3B4	99	96.912	ENSOPRG00000010808	SF3B4	99	96.912	Ochotona_princeps
ENSCAFG00020019775	SF3B4	75	87.066	ENSODEG00000003597	-	79	87.066	Octodon_degus
ENSCAFG00020019775	SF3B4	56	95.359	ENSONIG00000002730	sf3b4	57	97.807	Oreochromis_niloticus
ENSCAFG00020019775	SF3B4	99	57.907	ENSOANG00000004768	-	50	81.776	Ornithorhynchus_anatinus
ENSCAFG00020019775	SF3B4	100	99.528	ENSOCUG00000004614	SF3B4	100	99.528	Oryctolagus_cuniculus
ENSCAFG00020019775	SF3B4	55	96.983	ENSORLG00000003062	sf3b4	59	97.807	Oryzias_latipes
ENSCAFG00020019775	SF3B4	100	99.528	ENSOGAG00000006265	SF3B4	100	99.528	Otolemur_garnettii
ENSCAFG00020019775	SF3B4	100	99.528	ENSOARG00000020718	-	100	99.528	Ovis_aries
ENSCAFG00020019775	SF3B4	86	78.049	ENSOARG00000007368	-	77	79.375	Ovis_aries
ENSCAFG00020019775	SF3B4	100	99.292	ENSPPAG00000040904	SF3B4	100	99.292	Pan_paniscus
ENSCAFG00020019775	SF3B4	100	81.368	ENSPPAG00000030024	-	78	82.407	Pan_paniscus
ENSCAFG00020019775	SF3B4	100	99.528	ENSPPRG00000007384	SF3B4	100	99.528	Panthera_pardus
ENSCAFG00020019775	SF3B4	100	99.057	ENSPTIG00000014530	SF3B4	100	99.057	Panthera_tigris_altaica
ENSCAFG00020019775	SF3B4	100	99.292	ENSPTRG00000001243	SF3B4	100	99.292	Pan_troglodytes
ENSCAFG00020019775	SF3B4	100	78.538	ENSPTRG00000049727	-	59	90.254	Pan_troglodytes
ENSCAFG00020019775	SF3B4	100	99.292	ENSPANG00000005126	SF3B4	100	99.292	Papio_anubis
ENSCAFG00020019775	SF3B4	55	97.425	ENSPKIG00000020669	sf3b4	60	98.246	Paramormyrops_kingsleyae
ENSCAFG00020019775	SF3B4	66	75.357	ENSPSIG00000009565	SF3B4	68	98.378	Pelodiscus_sinensis
ENSCAFG00020019775	SF3B4	100	99.292	ENSPEMG00000017568	Sf3b4	100	99.292	Peromyscus_maniculatus_bairdii
ENSCAFG00020019775	SF3B4	61	88.716	ENSPMAG00000007842	-	50	95.283	Petromyzon_marinus
ENSCAFG00020019775	SF3B4	100	98.821	ENSPCIG00000008765	SF3B4	100	98.821	Phascolarctos_cinereus
ENSCAFG00020019775	SF3B4	64	90.476	ENSPFOG00000005754	sf3b4	58	97.368	Poecilia_formosa
ENSCAFG00020019775	SF3B4	64	90.476	ENSPLAG00000001401	sf3b4	63	97.368	Poecilia_latipinna
ENSCAFG00020019775	SF3B4	64	90.476	ENSPREG00000011076	sf3b4	57	97.807	Poecilia_reticulata
ENSCAFG00020019775	SF3B4	63	96.635	ENSPCAG00000000392	SF3B4	63	96.635	Procavia_capensis
ENSCAFG00020019775	SF3B4	100	99.528	ENSPCOG00000015399	SF3B4	100	99.528	Propithecus_coquereli
ENSCAFG00020019775	SF3B4	100	99.528	ENSPVAG00000014171	SF3B4	100	99.528	Pteropus_vampyrus
ENSCAFG00020019775	SF3B4	57	95.833	ENSPNYG00000012700	sf3b4	60	95.833	Pundamilia_nyererei
ENSCAFG00020019775	SF3B4	57	96.667	ENSPNAG00000000686	sf3b4	61	96.667	Pygocentrus_nattereri
ENSCAFG00020019775	SF3B4	100	99.292	ENSRNOG00000021181	Sf3b4	100	99.292	Rattus_norvegicus
ENSCAFG00020019775	SF3B4	100	99.292	ENSRBIG00000043392	SF3B4	100	99.292	Rhinopithecus_bieti
ENSCAFG00020019775	SF3B4	100	99.292	ENSRROG00000029366	SF3B4	100	99.292	Rhinopithecus_roxellana
ENSCAFG00020019775	SF3B4	92	71.208	ENSRROG00000028213	-	91	67.380	Rhinopithecus_roxellana
ENSCAFG00020019775	SF3B4	100	99.057	ENSSBOG00000012310	-	100	99.057	Saimiri_boliviensis_boliviensis
ENSCAFG00020019775	SF3B4	100	72.406	ENSSBOG00000025174	-	73	79.257	Saimiri_boliviensis_boliviensis
ENSCAFG00020019775	SF3B4	100	96.226	ENSSHAG00000004043	SF3B4	100	98.425	Sarcophilus_harrisii
ENSCAFG00020019775	SF3B4	56	96.624	ENSSFOG00015008864	sf3b4	56	98.246	Scleropages_formosus
ENSCAFG00020019775	SF3B4	57	96.667	ENSSMAG00000006837	sf3b4	60	96.667	Scophthalmus_maximus
ENSCAFG00020019775	SF3B4	57	97.083	ENSSDUG00000012064	sf3b4	60	97.083	Seriola_dumerili
ENSCAFG00020019775	SF3B4	57	97.083	ENSSLDG00000014226	sf3b4	60	97.083	Seriola_lalandi_dorsalis
ENSCAFG00020019775	SF3B4	72	95.102	ENSSPUG00000001028	SF3B4	57	98.684	Sphenodon_punctatus
ENSCAFG00020019775	SF3B4	57	97.500	ENSSPAG00000019219	sf3b4	60	97.500	Stegastes_partitus
ENSCAFG00020019775	SF3B4	100	99.292	ENSSSCG00000006665	-	100	99.292	Sus_scrofa
ENSCAFG00020019775	SF3B4	85	65.746	ENSSSCG00000039440	-	79	65.432	Sus_scrofa
ENSCAFG00020019775	SF3B4	56	97.034	ENSTGUG00000004470	SF3B4	90	98.246	Taeniopygia_guttata
ENSCAFG00020019775	SF3B4	54	96.916	ENSTRUG00000004516	sf3b4	57	96.491	Takifugu_rubripes
ENSCAFG00020019775	SF3B4	100	99.528	ENSTTRG00000005217	SF3B4	100	99.528	Tursiops_truncatus
ENSCAFG00020019775	SF3B4	100	99.528	ENSUAMG00000022468	SF3B4	100	99.528	Ursus_americanus
ENSCAFG00020019775	SF3B4	100	98.585	ENSUMAG00000003802	SF3B4	100	98.585	Ursus_maritimus
ENSCAFG00020019775	SF3B4	97	99.515	ENSVPAG00000008152	SF3B4	100	99.515	Vicugna_pacos
ENSCAFG00020019775	SF3B4	99	93.062	ENSVVUG00000007732	-	100	93.062	Vulpes_vulpes
ENSCAFG00020019775	SF3B4	65	96.377	ENSVVUG00000022697	-	58	96.377	Vulpes_vulpes
ENSCAFG00020019775	SF3B4	55	92.308	ENSXETG00000011038	sf3b4	53	100.000	Xenopus_tropicalis
ENSCAFG00020019775	SF3B4	54	97.391	ENSXCOG00000019895	sf3b4	58	97.807	Xiphophorus_couchianus
ENSCAFG00020019775	SF3B4	54	97.391	ENSXMAG00000003772	sf3b4	58	97.807	Xiphophorus_maculatus