EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020020007 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 9429 bases
Position: chrQKWQ01000243.1:8293253-8302681
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020025411	GTP_EFTU	PF00009.27	2.8e-54	1	1
ENSCAFP00020025411	GTP_EFTU_D2	PF03144.25	1.8e-13	1	1
ENSCAFP00020025411	GTP_EFTU_D3	PF03143.17	1.1e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020029346	-	1386	-	ENSCAFP00020025411	461 (aa)	-	UPI00005A0376

Gene Model

Click here to download ENSCAFG00020020007's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020020007's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020020007	-	99	83.043	ENSCAFG00020024277	-	99	83.043
ENSCAFG00020020007	-	99	85.870	ENSCAFG00020019936	-	99	85.870
ENSCAFG00020020007	-	95	31.011	ENSCAFG00020017574	TUFM	85	31.011
ENSCAFG00020020007	-	99	85.652	ENSCAFG00020001844	EEF1A2	99	85.652
ENSCAFG00020020007	-	74	78.592	ENSCAFG00020017073	-	99	78.592
ENSCAFG00020020007	-	56	77.308	ENSCAFG00020025380	-	99	77.308
ENSCAFG00020020007	-	92	85.681	ENSCAFG00020024045	-	97	85.681
ENSCAFG00020020007	-	68	78.730	ENSCAFG00020000392	-	92	78.730
ENSCAFG00020020007	-	99	80.435	ENSCAFG00020021583	-	99	80.435
ENSCAFG00020020007	-	92	78.014	ENSCAFG00020027369	-	80	78.014
ENSCAFG00020020007	-	92	86.321	ENSCAFG00020011707	-	98	86.321
ENSCAFG00020020007	-	99	72.826	ENSCAFG00020010008	-	95	72.826
ENSCAFG00020020007	-	95	38.952	ENSCAFG00020021904	HBS1L	62	38.952
ENSCAFG00020020007	-	99	85.000	ENSCAFG00020024258	-	99	85.000
ENSCAFG00020020007	-	92	36.235	ENSCAFG00020024250	GSPT1	76	36.235
ENSCAFG00020020007	-	95	35.973	ENSCAFG00020020040	GSPT2	68	35.973
ENSCAFG00020020007	-	78	79.944	ENSCAFG00020023000	-	99	79.944
ENSCAFG00020020007	-	99	85.217	ENSCAFG00020015021	-	99	85.217
ENSCAFG00020020007	-	92	79.433	ENSCAFG00020015447	-	88	79.433
ENSCAFG00020020007	-	99	85.000	ENSCAFG00020019987	-	99	85.000
ENSCAFG00020020007	-	99	85.870	ENSCAFG00020011671	-	99	85.870
ENSCAFG00020020007	-	99	84.348	ENSCAFG00020000747	-	99	84.348
ENSCAFG00020020007	-	99	82.826	ENSCAFG00020001153	-	99	82.826

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020020007	-	67	83.062	ENSAPOG00000004757	eef1a1l1	99	93.750	Acanthochromis_polyacanthus
ENSCAFG00020020007	-	100	77.440	ENSAMEG00000004317	-	100	77.440	Ailuropoda_melanoleuca
ENSCAFG00020020007	-	100	96.312	ENSAMEG00000009677	-	100	96.312	Ailuropoda_melanoleuca
ENSCAFG00020020007	-	100	100.000	ENSCAFG00000013249	-	100	100.000	Canis_familiaris
ENSCAFG00020020007	-	100	87.419	ENSCPBG00000000748	-	100	87.419	Chrysemys_picta_bellii
ENSCAFG00020020007	-	100	86.985	ENSCPBG00000000646	-	100	86.985	Chrysemys_picta_bellii
ENSCAFG00020020007	-	99	87.174	ENSDARG00000020850	eef1a1l1	99	87.174	Danio_rerio
ENSCAFG00020020007	-	85	81.472	ENSEASG00005018013	-	99	81.472	Equus_asinus_asinus
ENSCAFG00020020007	-	98	86.123	ENSEASG00005012365	-	96	86.730	Equus_asinus_asinus
ENSCAFG00020020007	-	100	83.948	ENSECAG00000022260	-	100	83.948	Equus_caballus
ENSCAFG00020020007	-	100	85.466	ENSELUG00000023536	eef1a1l1	100	85.466	Esox_lucius
ENSCAFG00020020007	-	100	85.900	ENSFCAG00000030530	-	100	85.900	Felis_catus
ENSCAFG00020020007	-	100	86.985	ENSGAGG00000000648	-	100	86.985	Gopherus_agassizii
ENSCAFG00020020007	-	100	87.419	ENSGAGG00000000642	-	100	87.419	Gopherus_agassizii
ENSCAFG00020020007	-	90	84.262	ENSLBEG00000002790	eef1a1l1	99	84.262	Labrus_bergylta
ENSCAFG00020020007	-	100	90.672	ENSLAFG00000028081	-	99	90.672	Loxodonta_africana
ENSCAFG00020020007	-	100	86.117	ENSLAFG00000025161	-	100	86.117	Loxodonta_africana
ENSCAFG00020020007	-	75	87.861	ENSOANG00000012066	-	100	87.861	Ornithorhynchus_anatinus
ENSCAFG00020020007	-	90	85.714	ENSOMEG00000006888	-	99	85.714	Oryzias_melastigma
ENSCAFG00020020007	-	100	85.900	ENSOARG00000002943	-	100	85.900	Ovis_aries
ENSCAFG00020020007	-	100	94.577	ENSPPRG00000008525	-	100	94.577	Panthera_pardus
ENSCAFG00020020007	-	97	86.161	ENSPPRG00000005678	-	96	86.161	Panthera_pardus
ENSCAFG00020020007	-	100	96.312	ENSPTIG00000006939	-	100	96.312	Panthera_tigris_altaica
ENSCAFG00020020007	-	100	86.768	ENSPSIG00000008610	-	100	86.768	Pelodiscus_sinensis
ENSCAFG00020020007	-	66	94.444	ENSPVAG00000007682	-	65	94.444	Pteropus_vampyrus
ENSCAFG00020020007	-	100	79.393	ENSSMAG00000018455	-	99	79.393	Scophthalmus_maximus
ENSCAFG00020020007	-	100	86.551	ENSSPUG00000003655	-	100	86.551	Sphenodon_punctatus
ENSCAFG00020020007	-	98	88.717	ENSSSCG00000038035	-	100	88.503	Sus_scrofa
ENSCAFG00020020007	-	100	86.117	ENSSSCG00000034113	-	100	86.117	Sus_scrofa
ENSCAFG00020020007	-	51	78.723	ENSUAMG00000006085	-	98	78.723	Ursus_americanus
ENSCAFG00020020007	-	100	94.143	ENSUAMG00000008928	-	100	94.143	Ursus_americanus
ENSCAFG00020020007	-	100	74.620	ENSUAMG00000007676	-	100	74.620	Ursus_americanus
ENSCAFG00020020007	-	100	96.746	ENSUMAG00000013211	-	100	96.746	Ursus_maritimus
ENSCAFG00020020007	-	100	99.783	ENSVVUG00000026886	-	100	99.783	Vulpes_vulpes
ENSCAFG00020020007	-	100	85.033	ENSXETG00000022604	eef1a1o	100	85.033	Xenopus_tropicalis