EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020020326 (Gene tree)
Gene ID: 112651120
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 18341 bases
Position: chrQKWQ01000288.1:5046-23386
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020025852	GTP_EFTU	PF00009.27	4e-07	1	1
ENSCAFP00020025858	GTP_EFTU	PF00009.27	4.4e-07	1	1
ENSCAFP00020025852	MMR_HSR1	PF01926.23	7.4e-06	1	1
ENSCAFP00020025858	MMR_HSR1	PF01926.23	8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020029867	-	1220	-	ENSCAFP00020025858	380 (aa)	-	-
ENSCAFT00020029860	-	1202	-	ENSCAFP00020025852	374 (aa)	-	UPI0003AE4E46

Gene Model

Click here to download ENSCAFG00020020326's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020020326's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020020326	-	100	99.198	ENSCAFG00020022034	-	99	99.198

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020020326	-	100	94.920	ENSG00000198522	GPN1	100	96.610	Homo_sapiens
ENSCAFG00020020326	-	100	96.791	ENSAMEG00000001201	GPN1	96	96.791	Ailuropoda_melanoleuca
ENSCAFG00020020326	-	88	73.214	ENSAPEG00000000067	gpn1	92	67.416	Amphiprion_percula
ENSCAFG00020020326	-	97	76.519	ENSAPEG00000000050	gpn1	91	76.519	Amphiprion_percula
ENSCAFG00020020326	-	99	77.419	ENSATEG00000015542	gpn1	94	79.272	Anabas_testudineus
ENSCAFG00020020326	-	93	79.827	ENSAPLG00000003530	GPN1	99	79.827	Anas_platyrhynchos
ENSCAFG00020020326	-	90	73.977	ENSACAG00000008974	GPN1	99	74.636	Anolis_carolinensis
ENSCAFG00020020326	-	100	93.850	ENSANAG00000024716	GPN1	93	94.751	Aotus_nancymaae
ENSCAFG00020020326	-	97	79.339	ENSACLG00000025644	gpn1	89	79.494	Astatotilapia_calliptera
ENSCAFG00020020326	-	99	77.660	ENSAMXG00000031098	gpn1	89	79.282	Astyanax_mexicanus
ENSCAFG00020020326	-	74	59.786	WBGene00001661	gop-2	67	64.286	Caenorhabditis_elegans
ENSCAFG00020020326	-	97	95.580	ENSCJAG00000046633	GPN1	93	95.580	Callithrix_jacchus
ENSCAFG00020020326	-	55	97.585	ENSCAFG00000032406	-	96	97.585	Canis_familiaris
ENSCAFG00020020326	-	100	99.733	ENSCAFG00000005160	-	96	99.733	Canis_familiaris
ENSCAFG00020020326	-	73	85.145	ENSCAFG00000024379	-	98	87.912	Canis_familiaris
ENSCAFG00020020326	-	100	87.968	ENSCHIG00000017789	-	97	89.227	Capra_hircus
ENSCAFG00020020326	-	100	91.711	ENSTSYG00000006604	GPN1	96	92.798	Carlito_syrichta
ENSCAFG00020020326	-	78	91.468	ENSCAPG00000015026	GPN1	90	91.156	Cavia_aperea
ENSCAFG00020020326	-	99	91.398	ENSCPOG00000004359	GPN1	97	92.521	Cavia_porcellus
ENSCAFG00020020326	-	97	95.580	ENSCCAG00000035409	GPN1	93	95.580	Cebus_capucinus
ENSCAFG00020020326	-	97	95.304	ENSCATG00000042260	GPN1	93	95.304	Cercocebus_atys
ENSCAFG00020020326	-	100	91.979	ENSCLAG00000008226	GPN1	97	93.646	Chinchilla_lanigera
ENSCAFG00020020326	-	97	95.028	ENSCSAG00000010222	GPN1	93	95.028	Chlorocebus_sabaeus
ENSCAFG00020020326	-	97	82.920	ENSCPBG00000009367	GPN1	96	83.149	Chrysemys_picta_bellii
ENSCAFG00020020326	-	74	67.384	ENSCING00000023847	-	86	68.132	Ciona_intestinalis
ENSCAFG00020020326	-	73	68.750	ENSCSAVG00000004925	-	95	65.614	Ciona_savignyi
ENSCAFG00020020326	-	97	95.028	ENSCANG00000031249	GPN1	100	95.593	Colobus_angolensis_palliatus
ENSCAFG00020020326	-	99	91.935	ENSCGRG00001017621	Gpn1	97	93.056	Cricetulus_griseus_chok1gshd
ENSCAFG00020020326	-	99	91.935	ENSCGRG00000003560	Gpn1	97	93.056	Cricetulus_griseus_crigri
ENSCAFG00020020326	-	93	71.839	ENSCSEG00000019468	gpn1	87	71.839	Cynoglossus_semilaevis
ENSCAFG00020020326	-	99	78.226	ENSDARG00000043928	gpn1	89	80.672	Danio_rerio
ENSCAFG00020020326	-	99	91.689	ENSDORG00000006558	Gpn1	96	92.798	Dipodomys_ordii
ENSCAFG00020020326	-	80	53.698	FBgn0040346	CG3704	63	61.826	Drosophila_melanogaster
ENSCAFG00020020326	-	97	96.133	ENSEASG00005009082	GPN1	97	96.133	Equus_asinus_asinus
ENSCAFG00020020326	-	97	90.055	ENSECAG00000009579	GPN1	97	90.055	Equus_caballus
ENSCAFG00020020326	-	98	93.716	ENSEEUG00000013421	GPN1	96	94.199	Erinaceus_europaeus
ENSCAFG00020020326	-	99	74.064	ENSELUG00000006293	gpn1	90	76.045	Esox_lucius
ENSCAFG00020020326	-	91	96.774	ENSFCAG00000030425	GPN1	100	97.966	Felis_catus
ENSCAFG00020020326	-	89	79.403	ENSFALG00000011331	GPN1	99	79.403	Ficedula_albicollis
ENSCAFG00020020326	-	99	90.617	ENSFDAG00000014526	GPN1	97	92.521	Fukomys_damarensis
ENSCAFG00020020326	-	95	78.090	ENSGMOG00000016174	gpn1	99	78.090	Gadus_morhua
ENSCAFG00020020326	-	95	80.952	ENSGALG00000016505	GPN1	98	80.110	Gallus_gallus
ENSCAFG00020020326	-	99	74.026	ENSGAFG00000016670	gpn1	76	75.833	Gambusia_affinis
ENSCAFG00020020326	-	96	76.776	ENSGACG00000017639	gpn1	96	80.793	Gasterosteus_aculeatus
ENSCAFG00020020326	-	95	83.754	ENSGAGG00000016449	GPN1	95	83.754	Gopherus_agassizii
ENSCAFG00020020326	-	100	94.920	ENSGGOG00000015285	GPN1	93	95.856	Gorilla_gorilla
ENSCAFG00020020326	-	97	79.614	ENSHBUG00000022933	gpn1	89	81.873	Haplochromis_burtoni
ENSCAFG00020020326	-	100	89.840	ENSHGLG00000010319	GPN1	97	91.160	Heterocephalus_glaber_female
ENSCAFG00020020326	-	100	89.840	ENSHGLG00100016905	GPN1	97	91.160	Heterocephalus_glaber_male
ENSCAFG00020020326	-	98	77.957	ENSIPUG00000011938	gpn1	89	80.112	Ictalurus_punctatus
ENSCAFG00020020326	-	99	92.204	ENSSTOG00000006379	-	97	93.611	Ictidomys_tridecemlineatus
ENSCAFG00020020326	-	100	73.037	ENSKMAG00000011063	gpn1	92	75.138	Kryptolebias_marmoratus
ENSCAFG00020020326	-	61	87.826	ENSLACG00000001268	GPN1	98	88.053	Latimeria_chalumnae
ENSCAFG00020020326	-	99	77.297	ENSLOCG00000015949	gpn1	90	78.670	Lepisosteus_oculatus
ENSCAFG00020020326	-	99	94.370	ENSLAFG00000011179	GPN1	97	96.122	Loxodonta_africana
ENSCAFG00020020326	-	97	95.304	ENSMFAG00000035863	GPN1	93	95.304	Macaca_fascicularis
ENSCAFG00020020326	-	97	95.304	ENSMMUG00000019745	GPN1	93	95.304	Macaca_mulatta
ENSCAFG00020020326	-	97	95.304	ENSMNEG00000027876	GPN1	93	95.304	Macaca_nemestrina
ENSCAFG00020020326	-	97	88.398	ENSMLEG00000031376	GPN1	93	84.530	Mandrillus_leucophaeus
ENSCAFG00020020326	-	97	79.339	ENSMZEG00005003265	gpn1	89	79.494	Maylandia_zebra
ENSCAFG00020020326	-	83	81.789	ENSMGAG00000014062	GPN1	99	81.789	Meleagris_gallopavo
ENSCAFG00020020326	-	96	93.333	ENSMAUG00000018225	Gpn1	97	93.075	Mesocricetus_auratus
ENSCAFG00020020326	-	100	95.722	ENSMICG00000042626	GPN1	97	96.685	Microcebus_murinus
ENSCAFG00020020326	-	96	93.611	ENSMOCG00000021769	Gpn1	97	93.352	Microtus_ochrogaster
ENSCAFG00020020326	-	95	78.889	ENSMMOG00000002005	gpn1	73	77.135	Mola_mola
ENSCAFG00020020326	-	95	89.607	ENSMODG00000015592	GPN1	96	89.722	Monodelphis_domestica
ENSCAFG00020020326	-	95	80.168	ENSMALG00000015121	gpn1	83	79.050	Monopterus_albus
ENSCAFG00020020326	-	99	90.860	MGP_CAROLIEiJ_G0027095	Gpn1	97	92.222	Mus_caroli
ENSCAFG00020020326	-	99	90.323	ENSMUSG00000064037	Gpn1	97	91.667	Mus_musculus
ENSCAFG00020020326	-	93	90.173	MGP_PahariEiJ_G0029286	Gpn1	93	91.343	Mus_pahari
ENSCAFG00020020326	-	99	90.054	MGP_SPRETEiJ_G0028091	Gpn1	97	91.111	Mus_spretus
ENSCAFG00020020326	-	96	95.833	ENSMLUG00000011928	GPN1	94	95.568	Myotis_lucifugus
ENSCAFG00020020326	-	100	94.920	ENSNLEG00000003945	GPN1	100	96.610	Nomascus_leucogenys
ENSCAFG00020020326	-	100	94.118	ENSOPRG00000013015	GPN1	97	95.028	Ochotona_princeps
ENSCAFG00020020326	-	100	91.444	ENSODEG00000007092	GPN1	97	92.541	Octodon_degus
ENSCAFG00020020326	-	100	76.804	ENSONIG00000003361	gpn1	90	79.272	Oreochromis_niloticus
ENSCAFG00020020326	-	99	77.273	ENSORLG00020015676	gpn1	90	75.831	Oryzias_latipes_hni
ENSCAFG00020020326	-	100	76.702	ENSORLG00015013049	gpn1	91	79.775	Oryzias_latipes_hsok
ENSCAFG00020020326	-	100	76.702	ENSOMEG00000022023	gpn1	94	78.571	Oryzias_melastigma
ENSCAFG00020020326	-	89	94.311	ENSOGAG00000014057	GPN1	93	94.311	Otolemur_garnettii
ENSCAFG00020020326	-	100	94.652	ENSPPAG00000022926	GPN1	93	95.580	Pan_paniscus
ENSCAFG00020020326	-	100	95.455	ENSPPRG00000001472	GPN1	97	97.037	Panthera_pardus
ENSCAFG00020020326	-	100	95.722	ENSPTIG00000007504	GPN1	97	97.407	Panthera_tigris_altaica
ENSCAFG00020020326	-	100	94.385	ENSPTRG00000011776	GPN1	93	95.304	Pan_troglodytes
ENSCAFG00020020326	-	97	95.304	ENSPANG00000011578	GPN1	93	95.304	Papio_anubis
ENSCAFG00020020326	-	99	77.748	ENSPKIG00000007460	gpn1	90	80.168	Paramormyrops_kingsleyae
ENSCAFG00020020326	-	99	70.557	ENSPMGG00000013238	gpn1	90	69.146	Periophthalmus_magnuspinnatus
ENSCAFG00020020326	-	99	91.935	ENSPEMG00000003913	Gpn1	97	92.798	Peromyscus_maniculatus_bairdii
ENSCAFG00020020326	-	95	89.296	ENSPCIG00000026182	GPN1	94	89.385	Phascolarctos_cinereus
ENSCAFG00020020326	-	99	75.269	ENSPFOG00000000034	gpn1	92	75.275	Poecilia_formosa
ENSCAFG00020020326	-	99	75.269	ENSPLAG00000023798	gpn1	92	75.549	Poecilia_latipinna
ENSCAFG00020020326	-	99	75.538	ENSPMEG00000002283	gpn1	91	77.876	Poecilia_mexicana
ENSCAFG00020020326	-	99	75.538	ENSPREG00000009028	gpn1	98	71.552	Poecilia_reticulata
ENSCAFG00020020326	-	100	85.829	ENSPPYG00000012538	GPN1	89	96.296	Pongo_abelii
ENSCAFG00020020326	-	97	96.133	ENSPCOG00000028038	GPN1	97	96.133	Propithecus_coquereli
ENSCAFG00020020326	-	93	91.329	ENSPVAG00000015220	GPN1	97	91.916	Pteropus_vampyrus
ENSCAFG00020020326	-	97	79.614	ENSPNYG00000019130	gpn1	89	79.775	Pundamilia_nyererei
ENSCAFG00020020326	-	94	74.863	ENSPNAG00000010900	gpn1	82	79.290	Pygocentrus_nattereri
ENSCAFG00020020326	-	96	92.222	ENSRNOG00000004941	Gpn1	97	92.222	Rattus_norvegicus
ENSCAFG00020020326	-	97	95.304	ENSRBIG00000038211	GPN1	93	95.304	Rhinopithecus_bieti
ENSCAFG00020020326	-	97	95.304	ENSRROG00000026146	GPN1	100	95.932	Rhinopithecus_roxellana
ENSCAFG00020020326	-	93	48.901	YJR072C	NPA3	79	52.961	Saccharomyces_cerevisiae
ENSCAFG00020020326	-	100	94.920	ENSSBOG00000025586	GPN1	93	95.856	Saimiri_boliviensis_boliviensis
ENSCAFG00020020326	-	97	78.788	ENSSFOG00015019441	gpn1	90	78.729	Scleropages_formosus
ENSCAFG00020020326	-	95	76.602	ENSSMAG00000005973	gpn1	89	76.602	Scophthalmus_maximus
ENSCAFG00020020326	-	98	76.613	ENSSDUG00000006929	gpn1	94	74.586	Seriola_dumerili
ENSCAFG00020020326	-	99	76.203	ENSSLDG00000014532	gpn1	89	78.992	Seriola_lalandi_dorsalis
ENSCAFG00020020326	-	92	77.143	ENSSPAG00000015690	gpn1	91	77.143	Stegastes_partitus
ENSCAFG00020020326	-	99	93.548	ENSSSCG00000008546	GPN1	97	95.000	Sus_scrofa
ENSCAFG00020020326	-	92	82.370	ENSTGUG00000014626	GPN1	96	82.081	Taeniopygia_guttata
ENSCAFG00020020326	-	95	77.591	ENSTRUG00000004290	gpn1	89	77.591	Takifugu_rubripes
ENSCAFG00020020326	-	95	77.809	ENSTNIG00000002572	gpn1	94	77.809	Tetraodon_nigroviridis
ENSCAFG00020020326	-	100	94.385	ENSTBEG00000007425	GPN1	97	95.304	Tupaia_belangeri
ENSCAFG00020020326	-	100	93.048	ENSTTRG00000012531	GPN1	97	92.265	Tursiops_truncatus
ENSCAFG00020020326	-	79	85.185	ENSUAMG00000012406	-	96	90.517	Ursus_americanus
ENSCAFG00020020326	-	100	96.791	ENSUMAG00000020247	GPN1	88	96.791	Ursus_maritimus
ENSCAFG00020020326	-	99	74.462	ENSXMAG00000005436	gpn1	82	74.451	Xiphophorus_maculatus