EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020020370 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 1822 bases
Position: chrQKWQ01002225.1:10895968-10897789
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020025895	LSM	PF01423.22	4.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020029915	-	228	-	ENSCAFP00020025895	75 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020020370's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020020370's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020020370	-	56	92.857	ENSCAFG00020003638	-	53	95.122

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020020370	-	61	97.826	ENSG00000125835	SNRPB	67	95.745	Homo_sapiens
ENSCAFG00020020370	-	52	92.308	ENSAPEG00000008846	-	59	92.308	Amphiprion_percula
ENSCAFG00020020370	-	63	72.340	ENSBTAG00000024548	-	64	72.340	Bos_taurus
ENSCAFG00020020370	-	63	89.362	ENSCJAG00000041673	-	60	89.362	Callithrix_jacchus
ENSCAFG00020020370	-	63	70.213	ENSCHIG00000024610	-	70	70.213	Capra_hircus
ENSCAFG00020020370	-	60	82.222	ENSCCAG00000035140	-	81	80.435	Cebus_capucinus
ENSCAFG00020020370	-	61	97.826	ENSCANG00000019461	SNRPB	56	95.652	Colobus_angolensis_palliatus
ENSCAFG00020020370	-	63	65.957	ENSFCAG00000041049	-	58	65.957	Felis_catus
ENSCAFG00020020370	-	61	95.652	ENSMAUG00000020656	-	59	95.652	Mesocricetus_auratus
ENSCAFG00020020370	-	85	78.125	ENSMAUG00000006516	-	72	95.745	Mesocricetus_auratus
ENSCAFG00020020370	-	61	97.826	MGP_CAROLIEiJ_G0024293	Snrpb	67	95.745	Mus_caroli
ENSCAFG00020020370	-	61	97.826	ENSMUSG00000027404	Snrpb	67	95.745	Mus_musculus
ENSCAFG00020020370	-	61	97.826	MGP_PahariEiJ_G0025738	Snrpb	67	95.745	Mus_pahari
ENSCAFG00020020370	-	61	97.826	MGP_SPRETEiJ_G0025213	Snrpb	66	95.745	Mus_spretus
ENSCAFG00020020370	-	63	74.468	ENSPPRG00000018908	-	53	74.468	Panthera_pardus
ENSCAFG00020020370	-	100	56.000	ENSPPRG00000024804	-	67	74.468	Panthera_pardus
ENSCAFG00020020370	-	63	91.489	ENSPMAG00000004923	SNRPB	53	91.489	Petromyzon_marinus
ENSCAFG00020020370	-	61	97.826	ENSRNOG00000006961	Snrpb	66	95.745	Rattus_norvegicus
ENSCAFG00020020370	-	63	72.340	ENSUAMG00000016301	-	64	72.340	Ursus_americanus
ENSCAFG00020020370	-	63	72.340	ENSUMAG00000011571	-	57	72.340	Ursus_maritimus
ENSCAFG00020020370	-	100	60.000	ENSVVUG00000011423	-	61	87.234	Vulpes_vulpes