EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020020371 (Gene tree)
Gene ID: 112667146
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 2531 bases
Position: chrQKWQ01001279.1:835027-837557
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020025896	zf-U11-48K	PF05253.12	5.5e-19	1	2
ENSCAFP00020025896	zf-U11-48K	PF05253.12	5.5e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020029916	-	477	-	ENSCAFP00020025896	158 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020020371's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020020371's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020020371	-	87	56.835	ENSCAFG00020013648	GTSF1L	89	56.835

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020020371	-	97	90.196	ENSAMEG00000000958	-	100	90.196	Ailuropoda_melanoleuca
ENSCAFG00020020371	-	97	100.000	ENSCAFG00000006463	-	99	100.000	Canis_familiaris
ENSCAFG00020020371	-	95	72.667	ENSCPOG00000023851	-	99	72.667	Cavia_porcellus
ENSCAFG00020020371	-	93	72.109	ENSCLAG00000008579	-	100	72.109	Chinchilla_lanigera
ENSCAFG00020020371	-	97	69.935	ENSCGRG00001016136	Gtsf2	99	69.935	Cricetulus_griseus_chok1gshd
ENSCAFG00020020371	-	97	69.935	ENSCGRG00000012950	Gtsf2	99	69.935	Cricetulus_griseus_crigri
ENSCAFG00020020371	-	97	78.431	ENSDORG00000026087	Gtsf2	99	78.431	Dipodomys_ordii
ENSCAFG00020020371	-	67	73.832	ENSEASG00005010262	-	98	73.832	Equus_asinus_asinus
ENSCAFG00020020371	-	67	81.132	ENSECAG00000014413	-	98	81.132	Equus_caballus
ENSCAFG00020020371	-	69	88.073	ENSFCAG00000031316	-	93	88.073	Felis_catus
ENSCAFG00020020371	-	95	74.667	ENSFDAG00000019555	-	99	74.667	Fukomys_damarensis
ENSCAFG00020020371	-	91	78.322	ENSHGLG00000002798	-	99	75.163	Heterocephalus_glaber_female
ENSCAFG00020020371	-	91	78.322	ENSHGLG00100012359	-	99	75.163	Heterocephalus_glaber_male
ENSCAFG00020020371	-	96	75.497	ENSSTOG00000030158	-	100	75.497	Ictidomys_tridecemlineatus
ENSCAFG00020020371	-	97	72.549	ENSJJAG00000016320	Gtsf2	99	72.549	Jaculus_jaculus
ENSCAFG00020020371	-	50	81.013	ENSMAUG00000014687	-	87	81.013	Mesocricetus_auratus
ENSCAFG00020020371	-	99	74.522	ENSMAUG00000017189	-	96	74.522	Mesocricetus_auratus
ENSCAFG00020020371	-	97	71.895	ENSMOCG00000014770	Gtsf2	99	71.895	Microtus_ochrogaster
ENSCAFG00020020371	-	97	70.588	MGP_CAROLIEiJ_G0020380	Gtsf2	99	70.588	Mus_caroli
ENSCAFG00020020371	-	97	71.242	ENSMUSG00000053508	Gtsf2	99	71.242	Mus_musculus
ENSCAFG00020020371	-	97	73.203	MGP_PahariEiJ_G0020379	Gtsf2	99	73.203	Mus_pahari
ENSCAFG00020020371	-	97	71.242	MGP_SPRETEiJ_G0021273	Gtsf2	99	71.242	Mus_spretus
ENSCAFG00020020371	-	97	88.889	ENSMPUG00000005664	-	99	88.889	Mustela_putorius_furo
ENSCAFG00020020371	-	97	67.320	ENSNGAG00000008752	Gtsf2	99	67.320	Nannospalax_galili
ENSCAFG00020020371	-	87	71.014	ENSODEG00000013228	-	98	69.388	Octodon_degus
ENSCAFG00020020371	-	80	90.551	ENSPPRG00000004157	-	99	90.551	Panthera_pardus
ENSCAFG00020020371	-	80	90.551	ENSPTIG00000020670	-	99	90.551	Panthera_tigris_altaica
ENSCAFG00020020371	-	97	67.320	ENSPEMG00000014641	-	94	73.585	Peromyscus_maniculatus_bairdii
ENSCAFG00020020371	-	97	75.163	ENSPEMG00000010828	-	99	75.163	Peromyscus_maniculatus_bairdii
ENSCAFG00020020371	-	97	71.242	ENSRNOG00000036830	RGD1563200	99	71.242	Rattus_norvegicus
ENSCAFG00020020371	-	100	68.098	ENSSSCG00000000296	-	99	68.098	Sus_scrofa
ENSCAFG00020020371	-	66	91.346	ENSUAMG00000021668	-	95	91.346	Ursus_americanus
ENSCAFG00020020371	-	66	91.346	ENSUMAG00000011281	-	95	91.346	Ursus_maritimus
ENSCAFG00020020371	-	67	94.340	ENSVVUG00000023684	-	97	94.340	Vulpes_vulpes